RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 SERPINA10Q9UK55 444 aa6.74□□□□□ -1.33
FXN-205ENST00000498653 COL12A1Q99715 3063 aa6.74□□□□□ -1.33
FXN-205ENST00000498653 MAPK4P31152 587 aa6.73□□□□□ -1.33
FXN-205ENST00000498653 RBM25P49756 843 aaKnown RBP6.73□□□□□ -1.33
FXN-205ENST00000498653 SRSF1Q07955 248 aaKnown RBP eCLIP6.73□□□□□ -1.33
FXN-205ENST00000498653 PDE4DQ08499 809 aa6.73□□□□□ -1.33
FXN-205ENST00000498653 TTLL4Q14679 1199 aa6.73□□□□□ -1.33
FXN-205ENST00000498653 HSP90AB3PQ58FF7 597 aa6.73□□□□□ -1.33
FXN-205ENST00000498653 FAM83AQ86UY5 434 aa6.73□□□□□ -1.33
FXN-205ENST00000498653 SPNS2Q8IVW8 549 aa6.73□□□□□ -1.33
FXN-205ENST00000498653 ZGPATQ8N5A5 531 aaKnown RBP6.73□□□□□ -1.33
FXN-205ENST00000498653 NPLOC4Q8TAT6 608 aa6.73□□□□□ -1.33
FXN-205ENST00000498653 SPATA18Q8TC71 538 aa6.73□□□□□ -1.33
FXN-205ENST00000498653 HOOK2Q96ED9 719 aa6.73□□□□□ -1.33
FXN-205ENST00000498653 THUMPD2Q9BTF0 503 aaKnown RBP6.73□□□□□ -1.33
FXN-205ENST00000498653 LSM14BQ9BX40 385 aaKnown RBP6.73□□□□□ -1.33
FXN-205ENST00000498653 TMEM134Q9H6X4 195 aa6.73□□□□□ -1.33
FXN-205ENST00000498653 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.73□□□□□ -1.33
FXN-205ENST00000498653 DAXXQ9UER7 740 aaPredicted RBP6.73□□□□□ -1.33
FXN-205ENST00000498653 MYO7AQ13402 2215 aa6.73□□□□□ -1.33
FXN-205ENST00000498653 RFX7Q2KHR2 1363 aa6.72□□□□□ -1.33
FXN-205ENST00000498653 CELSR3Q9NYQ7 3312 aa6.72□□□□□ -1.33
FXN-205ENST00000498653 TRIM75PA6NK02 468 aa6.72□□□□□ -1.33
FXN-205ENST00000498653 PRR5-ARHGAP8B1AHC4 643 aa6.72□□□□□ -1.33
FXN-205ENST00000498653 ARHGAP8P85298 464 aa6.72□□□□□ -1.33
FXN-205ENST00000498653 LMNB2Q03252 620 aa6.72□□□□□ -1.33
FXN-205ENST00000498653 DLX2Q07687 328 aaPredicted RBP6.72□□□□□ -1.33
FXN-205ENST00000498653 MMRN1Q13201 1228 aa6.72□□□□□ -1.33
FXN-205ENST00000498653 SMAD4Q13485 552 aaKnown RBP6.72□□□□□ -1.33
FXN-205ENST00000498653 PTPN21Q16825 1174 aa6.72□□□□□ -1.33
FXN-205ENST00000498653 PLEKHH3Q7Z736 793 aa6.72□□□□□ -1.33
FXN-205ENST00000498653 ZFPM1Q8IX07 1006 aa6.72□□□□□ -1.33
FXN-205ENST00000498653 SCYL3Q8IZE3 742 aa6.72□□□□□ -1.33
FXN-205ENST00000498653 SUMF1Q8NBK3 374 aa6.72□□□□□ -1.33
FXN-205ENST00000498653 PROCA1Q8NCQ7 364 aaPredicted RBP6.72□□□□□ -1.33
FXN-205ENST00000498653 WNT2BQ93097 391 aa6.72□□□□□ -1.33
FXN-205ENST00000498653 WNT8AQ9H1J5 351 aa6.72□□□□□ -1.33
FXN-205ENST00000498653 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.72□□□□□ -1.33
FXN-205ENST00000498653 MINPP1Q9UNW1 487 aa6.72□□□□□ -1.33
FXN-205ENST00000498653 SALL1Q9NSC2 1324 aa6.72□□□□□ -1.33
FXN-205ENST00000498653 PHF20L1A8MW92 1017 aa6.71□□□□□ -1.34
FXN-205ENST00000498653 C3orf80F5H4A9 247 aa6.71□□□□□ -1.34
FXN-205ENST00000498653 RNF40O75150 1001 aa6.71□□□□□ -1.34
FXN-205ENST00000498653 HOXC6P09630 235 aa6.71□□□□□ -1.34
FXN-205ENST00000498653 ICAM3P32942 547 aa6.71□□□□□ -1.34
FXN-205ENST00000498653 CDK7P50613 346 aa6.71□□□□□ -1.34
FXN-205ENST00000498653 ZNF200P98182 395 aaPredicted RBP6.71□□□□□ -1.34
FXN-205ENST00000498653 Q3C1V9 767 aa6.71□□□□□ -1.34
FXN-205ENST00000498653 TCEAL5Q5H9L2 206 aa6.71□□□□□ -1.34
FXN-205ENST00000498653 RTL5Q5HYW3 569 aaPredicted RBP6.71□□□□□ -1.34
FXN-205ENST00000498653 CWF19L1Q69YN2 538 aaKnown RBP6.71□□□□□ -1.34
FXN-205ENST00000498653 EP400NLQ6ZTU2 488 aa6.71□□□□□ -1.34
FXN-205ENST00000498653 RPAINQ86UA6 219 aa6.71□□□□□ -1.34
FXN-205ENST00000498653 CCDC84Q86UT8 332 aaPredicted RBP6.71□□□□□ -1.34
FXN-205ENST00000498653 HERC6Q8IVU3 1022 aa6.71□□□□□ -1.34
FXN-205ENST00000498653 FAM126BQ8IXS8 530 aa6.71□□□□□ -1.34
FXN-205ENST00000498653 CCDC105Q8IYK2 499 aa6.71□□□□□ -1.34
FXN-205ENST00000498653 EDC3Q96F86 508 aaKnown RBP6.71□□□□□ -1.34
FXN-205ENST00000498653 SLC9A7Q96T83 725 aa6.71□□□□□ -1.34
FXN-205ENST00000498653 STARD7Q9NQZ5 370 aa6.71□□□□□ -1.34
FXN-205ENST00000498653 CLDND1Q9NY35 253 aa6.71□□□□□ -1.34
FXN-205ENST00000498653 MTUS1Q9ULD2 1270 aa6.71□□□□□ -1.34
FXN-205ENST00000498653 SRPK3Q9UPE1 567 aa6.71□□□□□ -1.34
FXN-205ENST00000498653 KNSTRNQ9Y448 316 aa6.71□□□□□ -1.34
FXN-205ENST00000498653 ROBO3Q96MS0 1386 aa6.7□□□□□ -1.34
FXN-205ENST00000498653 A0A1B0GUL7 405 aa6.7□□□□□ -1.34
FXN-205ENST00000498653 IRS4O14654 1257 aaPredicted RBP6.7□□□□□ -1.34
FXN-205ENST00000498653 ARHGAP6O43182 974 aa6.7□□□□□ -1.34
FXN-205ENST00000498653 TBX10O75333 385 aa6.7□□□□□ -1.34
FXN-205ENST00000498653 PGK1P00558 417 aa6.7□□□□□ -1.34
FXN-205ENST00000498653 PLA2G2AP14555 144 aa6.7□□□□□ -1.34
FXN-205ENST00000498653 CRKP46108 304 aa6.7□□□□□ -1.34
FXN-205ENST00000498653 NEUROD2Q15784 382 aa6.7□□□□□ -1.34
FXN-205ENST00000498653 CTC1Q2NKJ3 1217 aa6.7□□□□□ -1.34
FXN-205ENST00000498653 SWT1Q5T5J6 900 aaKnown RBP6.7□□□□□ -1.34
FXN-205ENST00000498653 DIEXFQ68CQ4 756 aaKnown RBP6.7□□□□□ -1.34
FXN-205ENST00000498653 ANKRD18AQ8IVF6 992 aa6.7□□□□□ -1.34
FXN-205ENST00000498653 GPRC5AQ8NFJ5 357 aa6.7□□□□□ -1.34
FXN-205ENST00000498653 GAS2L2Q8NHY3 880 aa6.7□□□□□ -1.34
FXN-205ENST00000498653 RUNDC1Q96C34 613 aa6.7□□□□□ -1.34
FXN-205ENST00000498653 MRPL38Q96DV4 380 aaKnown RBP6.7□□□□□ -1.34
FXN-205ENST00000498653 XPNPEP3Q9NQH7 507 aa6.7□□□□□ -1.34
FXN-205ENST00000498653 KCNK4Q9NYG8 393 aa6.7□□□□□ -1.34
FXN-205ENST00000498653 ATAD5Q96QE3 1844 aa6.7□□□□□ -1.34
FXN-205ENST00000498653 TANC1Q9C0D5 1861 aa6.7□□□□□ -1.34
FXN-205ENST00000498653 MROH7Q68CQ1 1323 aa6.7□□□□□ -1.34
FXN-205ENST00000498653 CD4P01730 458 aa6.69□□□□□ -1.34
FXN-205ENST00000498653 IL1R1P14778 569 aa6.69□□□□□ -1.34
FXN-205ENST00000498653 TGM1P22735 817 aa6.69□□□□□ -1.34
FXN-205ENST00000498653 CCL23P55773 120 aa6.69□□□□□ -1.34
FXN-205ENST00000498653 ERVK-21P61565 698 aa6.69□□□□□ -1.34
FXN-205ENST00000498653 ERVK-9P63128 1117 aa6.69□□□□□ -1.34
FXN-205ENST00000498653 ERVK-24P63145 666 aa6.69□□□□□ -1.34
FXN-205ENST00000498653 ATP2B2Q01814 1243 aa6.69□□□□□ -1.34
FXN-205ENST00000498653 TIGD5Q53EQ6 642 aa6.69□□□□□ -1.34
FXN-205ENST00000498653 N4BP2L1Q5TBK1 243 aaPredicted RBP6.69□□□□□ -1.34
FXN-205ENST00000498653 FKBP1CQ5VVH2 108 aa6.69□□□□□ -1.34
FXN-205ENST00000498653 COPS6Q7L5N1 327 aa6.69□□□□□ -1.34
FXN-205ENST00000498653 PDZD3Q86UT5 571 aa6.69□□□□□ -1.34
FXN-205ENST00000498653 PARP9Q8IXQ6 854 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms