RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 MAMDC2Q7Z304 686 aaPredicted RBP10.79□□□□□ -0.68
SNX13-212ENST00000498463 BRF1Q92994 677 aa10.79□□□□□ -0.68
SNX13-212ENST00000498463 ATXN3LQ9H3M9 355 aa10.79□□□□□ -0.68
SNX13-212ENST00000498463 KCNK4Q9NYG8 393 aa10.79□□□□□ -0.68
SNX13-212ENST00000498463 APOBEC2Q9Y235 224 aaKnown RBP10.79□□□□□ -0.68
SNX13-212ENST00000498463 M0R082 166 aa10.78□□□□□ -0.68
SNX13-212ENST00000498463 ZEB2O60315 1214 aa10.78□□□□□ -0.68
SNX13-212ENST00000498463 GFRA3O60609 400 aa10.78□□□□□ -0.68
SNX13-212ENST00000498463 KCNH1O95259 989 aa10.78□□□□□ -0.68
SNX13-212ENST00000498463 OS9Q13438 667 aaPredicted RBP10.78□□□□□ -0.68
SNX13-212ENST00000498463 MLC1Q15049 377 aa10.78□□□□□ -0.68
SNX13-212ENST00000498463 EXOSC6Q5RKV6 272 aaKnown RBP10.78□□□□□ -0.68
SNX13-212ENST00000498463 CDCA2Q69YH5 1023 aaPredicted RBP10.78□□□□□ -0.68
SNX13-212ENST00000498463 GTF2IRD2BQ6EKJ0 949 aa10.78□□□□□ -0.68
SNX13-212ENST00000498463 C8orf86Q6ZUL3 223 aa10.78□□□□□ -0.68
SNX13-212ENST00000498463 UBE2R2Q712K3 238 aaPredicted RBP10.78□□□□□ -0.68
SNX13-212ENST00000498463 GTF2IRD2Q86UP8 949 aa10.78□□□□□ -0.68
SNX13-212ENST00000498463 GOLGA6L1Q8N7Z2 621 aa10.78□□□□□ -0.68
SNX13-212ENST00000498463 ZNF417Q8TAU3 575 aa10.78□□□□□ -0.68
SNX13-212ENST00000498463 XAGE3Q8WTP9 111 aa10.78□□□□□ -0.68
SNX13-212ENST00000498463 PPP1R13LQ8WUF5 828 aa10.78□□□□□ -0.68
SNX13-212ENST00000498463 ZNF587Q96SQ5 575 aaPredicted RBP10.78□□□□□ -0.68
SNX13-212ENST00000498463 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.78□□□□□ -0.68
SNX13-212ENST00000498463 CRTAC1Q9NQ79 661 aa10.78□□□□□ -0.68
SNX13-212ENST00000498463 CHST12Q9NRB3 414 aa10.78□□□□□ -0.68
SNX13-212ENST00000498463 MBIPQ9NS73 344 aa10.78□□□□□ -0.68
SNX13-212ENST00000498463 AP4E1Q9UPM8 1137 aa10.78□□□□□ -0.68
SNX13-212ENST00000498463 B4E1Z4 1266 aa10.77□□□□□ -0.69
SNX13-212ENST00000498463 RGS20O76081 388 aa10.77□□□□□ -0.69
SNX13-212ENST00000498463 EPXP11678 715 aa10.77□□□□□ -0.69
SNX13-212ENST00000498463 TTLL4Q14679 1199 aa10.77□□□□□ -0.69
SNX13-212ENST00000498463 SKOR2Q2VWA4 1001 aaPredicted RBP10.77□□□□□ -0.69
SNX13-212ENST00000498463 SAMD3Q8N6K7 520 aa10.77□□□□□ -0.69
SNX13-212ENST00000498463 MAGEB6Q8N7X4 407 aa10.77□□□□□ -0.69
SNX13-212ENST00000498463 UBASH3BQ8TF42 649 aa10.77□□□□□ -0.69
SNX13-212ENST00000498463 SPEF1Q9Y4P9 236 aa10.77□□□□□ -0.69
SNX13-212ENST00000498463 PRPF3O43395 683 aaKnown RBP10.76□□□□□ -0.69
SNX13-212ENST00000498463 ABLIM3O94929 683 aa10.76□□□□□ -0.69
SNX13-212ENST00000498463 KCNJ6P48051 423 aa10.76□□□□□ -0.69
SNX13-212ENST00000498463 RNF4P78317 190 aa10.76□□□□□ -0.69
SNX13-212ENST00000498463 PIK3R6Q5UE93 754 aa10.76□□□□□ -0.69
SNX13-212ENST00000498463 ZCCHC8Q6NZY4 707 aaKnown RBP10.76□□□□□ -0.69
SNX13-212ENST00000498463 TMEM145Q8NBT3 493 aa10.76□□□□□ -0.69
SNX13-212ENST00000498463 ISL2Q96A47 359 aa10.76□□□□□ -0.69
SNX13-212ENST00000498463 RHOBTB2Q9BYZ6 727 aa10.76□□□□□ -0.69
SNX13-212ENST00000498463 NKX2-4Q9H2Z4 354 aa10.76□□□□□ -0.69
SNX13-212ENST00000498463 PRDM16Q9HAZ2 1276 aa10.76□□□□□ -0.69
SNX13-212ENST00000498463 TRAF6Q9Y4K3 522 aa10.76□□□□□ -0.69
SNX13-212ENST00000498463 TNKSO95271 1327 aa10.76□□□□□ -0.69
SNX13-212ENST00000498463 GOLGA6CA6NDK9 693 aa10.75□□□□□ -0.69
SNX13-212ENST00000498463 GOLGA6BA6NDN3 693 aa10.75□□□□□ -0.69
SNX13-212ENST00000498463 CRTAMO95727 393 aa10.75□□□□□ -0.69
SNX13-212ENST00000498463 SNRPB2P08579 225 aaKnown RBP10.75□□□□□ -0.69
SNX13-212ENST00000498463 GOLGA6DP0CG33 693 aa10.75□□□□□ -0.69
SNX13-212ENST00000498463 SNRPBP14678 240 aaKnown RBP10.75□□□□□ -0.69
SNX13-212ENST00000498463 SCNN1BP51168 640 aa10.75□□□□□ -0.69
SNX13-212ENST00000498463 ZNF445P59923 1031 aa10.75□□□□□ -0.69
SNX13-212ENST00000498463 BRD3Q15059 726 aa10.75□□□□□ -0.69
SNX13-212ENST00000498463 SLC4A10Q6U841 1118 aa10.75□□□□□ -0.69
SNX13-212ENST00000498463 ANKLE2Q86XL3 938 aa10.75□□□□□ -0.69
SNX13-212ENST00000498463 C1orf159Q96HA4 380 aa10.75□□□□□ -0.69
SNX13-212ENST00000498463 TMPRSS13Q9BYE2 586 aa10.75□□□□□ -0.69
SNX13-212ENST00000498463 FOXQ1Q9C009 403 aa10.75□□□□□ -0.69
SNX13-212ENST00000498463 GOLGA6AQ9NYA3 693 aa10.75□□□□□ -0.69
SNX13-212ENST00000498463 A0A087WZG4 1122 aa10.74□□□□□ -0.69
SNX13-212ENST00000498463 RFPL1O75677 317 aa10.74□□□□□ -0.69
SNX13-212ENST00000498463 FBXO21O94952 628 aa10.74□□□□□ -0.69
SNX13-212ENST00000498463 LDHAP00338 332 aaKnown RBP10.74□□□□□ -0.69
SNX13-212ENST00000498463 PYGMP11217 842 aa10.74□□□□□ -0.69
SNX13-212ENST00000498463 KSR2Q6VAB6 950 aa10.74□□□□□ -0.69
SNX13-212ENST00000498463 DNAJB8Q8NHS0 232 aa10.74□□□□□ -0.69
SNX13-212ENST00000498463 JPH3Q8WXH2 748 aaPredicted RBP10.74□□□□□ -0.69
SNX13-212ENST00000498463 WNK4Q96J92 1243 aa10.74□□□□□ -0.69
SNX13-212ENST00000498463 CCDC140Q96MF4 163 aa10.74□□□□□ -0.69
SNX13-212ENST00000498463 KREMEN1Q96MU8 473 aa10.74□□□□□ -0.69
SNX13-212ENST00000498463 ORAI3Q9BRQ5 295 aa10.74□□□□□ -0.69
SNX13-212ENST00000498463 GMPR2Q9P2T1 348 aaKnown RBP10.74□□□□□ -0.69
SNX13-212ENST00000498463 FHOD1Q9Y613 1164 aa10.74□□□□□ -0.69
SNX13-212ENST00000498463 ASXL2Q76L83 1435 aa10.74□□□□□ -0.69
SNX13-212ENST00000498463 COL17A1Q9UMD9 1497 aaPredicted RBP10.74□□□□□ -0.69
SNX13-212ENST00000498463 M0R2C6 588 aa10.73□□□□□ -0.69
SNX13-212ENST00000498463 DEAF1O75398 565 aaPredicted RBP10.73□□□□□ -0.69
SNX13-212ENST00000498463 ADH5P11766 374 aa10.73□□□□□ -0.69
SNX13-212ENST00000498463 ZSCAN20P17040 1043 aaPredicted RBP10.73□□□□□ -0.69
SNX13-212ENST00000498463 HOXC12P31275 282 aa10.73□□□□□ -0.69
SNX13-212ENST00000498463 PRSS53Q2L4Q9 553 aa10.73□□□□□ -0.69
SNX13-212ENST00000498463 GFOD2Q3B7J2 385 aa10.73□□□□□ -0.69
SNX13-212ENST00000498463 C4orf46Q504U0 113 aa10.73□□□□□ -0.69
SNX13-212ENST00000498463 SLC35F1Q5T1Q4 408 aa10.73□□□□□ -0.69
SNX13-212ENST00000498463 ARMCX6Q7L4S7 300 aa10.73□□□□□ -0.69
SNX13-212ENST00000498463 VWCEQ96DN2 955 aa10.73□□□□□ -0.69
SNX13-212ENST00000498463 ZNF700Q9H0M5 742 aa10.73□□□□□ -0.69
SNX13-212ENST00000498463 NOL6Q9H6R4 1146 aaKnown RBP10.73□□□□□ -0.69
SNX13-212ENST00000498463 PCDHB12Q9Y5F1 795 aa10.73□□□□□ -0.69
SNX13-212ENST00000498463 ZNF891A8MT65 544 aaPredicted RBP10.72□□□□□ -0.69
SNX13-212ENST00000498463 PRKD3O94806 890 aa10.72□□□□□ -0.69
SNX13-212ENST00000498463 SCG5P05408 212 aa10.72□□□□□ -0.69
SNX13-212ENST00000498463 GRB10Q13322 594 aa10.72□□□□□ -0.69
SNX13-212ENST00000498463 PPP2R5DQ14738 602 aa10.72□□□□□ -0.69
SNX13-212ENST00000498463 ABCB5Q2M3G0 1257 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms