RNA–Protein interactions for RNA: ENST00000498447.5

SMIM19-206, Transcript of small integral membrane protein 19, humanhuman

TSL 3

Gene SMIM19, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM19-206ENST00000498447 SHHQ15465 462 aa20.98■□□□□ 0.95
SMIM19-206ENST00000498447 C9orf50Q5SZB4 431 aa20.98■□□□□ 0.95
SMIM19-206ENST00000498447 SNRNP48Q6IEG0 339 aaKnown RBP20.98■□□□□ 0.95
SMIM19-206ENST00000498447 TRIM43Q96BQ3 446 aaPredicted RBP20.98■□□□□ 0.95
SMIM19-206ENST00000498447 LENG1Q96BZ8 264 aaPredicted RBP20.98■□□□□ 0.95
SMIM19-206ENST00000498447 GUCD1Q96NT3 240 aa20.98■□□□□ 0.95
SMIM19-206ENST00000498447 CNPY2Q9Y2B0 182 aa20.98■□□□□ 0.95
SMIM19-206ENST00000498447 MYH4Q9Y623 1939 aa20.98■□□□□ 0.95
SMIM19-206ENST00000498447 IGKV6D-41A0A0C4DH26 115 aa20.97■□□□□ 0.95
SMIM19-206ENST00000498447 TDO2P48775 406 aa20.97■□□□□ 0.95
SMIM19-206ENST00000498447 TLE2Q04725 743 aa20.97■□□□□ 0.95
SMIM19-206ENST00000498447 PRPF38AQ8NAV1 312 aaKnown RBP20.97■□□□□ 0.95
SMIM19-206ENST00000498447 FAM161BQ96MY7 647 aa20.97■□□□□ 0.95
SMIM19-206ENST00000498447 CLIP2Q9UDT6 1046 aa20.97■□□□□ 0.95
SMIM19-206ENST00000498447 RIPK3Q9Y572 518 aa20.97■□□□□ 0.95
SMIM19-206ENST00000498447 M0R2C6 588 aa20.96■□□□□ 0.95
SMIM19-206ENST00000498447 PRDM1O75626 825 aa20.96■□□□□ 0.95
SMIM19-206ENST00000498447 GNAT2P19087 354 aa20.96■□□□□ 0.95
SMIM19-206ENST00000498447 ZNF444Q8N0Y2 327 aaPredicted RBP20.96■□□□□ 0.95
SMIM19-206ENST00000498447 MSL3Q8N5Y2 521 aaKnown RBP20.96■□□□□ 0.95
SMIM19-206ENST00000498447 DDX11Q96FC9 970 aa20.96■□□□□ 0.95
SMIM19-206ENST00000498447 ZNF287Q9HBT7 754 aa20.96■□□□□ 0.95
SMIM19-206ENST00000498447 DNAJC25-GNG10A0A024R161 153 aa20.95■□□□□ 0.94
SMIM19-206ENST00000498447 A0A1W2PQ45 241 aaPredicted RBP20.95■□□□□ 0.94
SMIM19-206ENST00000498447 A0A1W2PQY0 241 aa20.95■□□□□ 0.94
SMIM19-206ENST00000498447 ATP2A1O14983 1001 aa20.95■□□□□ 0.94
SMIM19-206ENST00000498447 ADAMTS4O75173 837 aa20.95■□□□□ 0.94
SMIM19-206ENST00000498447 APPP05067 770 aa20.95■□□□□ 0.94
SMIM19-206ENST00000498447 ZNF697Q5TEC3 545 aa20.95■□□□□ 0.94
SMIM19-206ENST00000498447 CPXCR1Q8N123 301 aa20.95■□□□□ 0.94
SMIM19-206ENST00000498447 KIFC2Q96AC6 838 aa20.95■□□□□ 0.94
SMIM19-206ENST00000498447 CEP95Q96GE4 821 aa20.95■□□□□ 0.94
SMIM19-206ENST00000498447 TACC3Q9Y6A5 838 aa20.95■□□□□ 0.94
SMIM19-206ENST00000498447 SYNGAP1Q96PV0 1343 aa20.95■□□□□ 0.94
SMIM19-206ENST00000498447 CDH23Q9H251 3354 aa20.94■□□□□ 0.94
SMIM19-206ENST00000498447 ZBED4O75132 1171 aa20.94■□□□□ 0.94
SMIM19-206ENST00000498447 CLTBP09497 229 aa20.94■□□□□ 0.94
SMIM19-206ENST00000498447 SLC4A3P48751 1232 aa20.94■□□□□ 0.94
SMIM19-206ENST00000498447 MKL1Q969V6 931 aa20.94■□□□□ 0.94
SMIM19-206ENST00000498447 MTMR4Q9NYA4 1195 aa20.94■□□□□ 0.94
SMIM19-206ENST00000498447 CTDP1Q9Y5B0 961 aaPredicted RBP20.94■□□□□ 0.94
SMIM19-206ENST00000498447 SYNRGQ9UMZ2 1314 aa20.94■□□□□ 0.94
SMIM19-206ENST00000498447 PATL2C9JE40 543 aaKnown RBP20.93■□□□□ 0.94
SMIM19-206ENST00000498447 SNAI1O95863 264 aaPredicted RBP20.93■□□□□ 0.94
SMIM19-206ENST00000498447 ITGB8P26012 769 aa20.93■□□□□ 0.94
SMIM19-206ENST00000498447 LRRFIP1Q32MZ4 808 aaKnown RBP20.93■□□□□ 0.94
SMIM19-206ENST00000498447 MAMDC4Q6UXC1 1216 aa20.93■□□□□ 0.94
SMIM19-206ENST00000498447 IFNL3Q8IZI9 196 aa20.93■□□□□ 0.94
SMIM19-206ENST00000498447 LRRC47Q8N1G4 583 aaKnown RBP20.93■□□□□ 0.94
SMIM19-206ENST00000498447 TSEN34Q9BSV6 310 aaKnown RBP20.93■□□□□ 0.94
SMIM19-206ENST00000498447 SLC38A10Q9HBR0 1119 aa20.93■□□□□ 0.94
SMIM19-206ENST00000498447 RAVER2Q9HCJ3 691 aaKnown RBP20.93■□□□□ 0.94
SMIM19-206ENST00000498447 FEM1BQ9UK73 627 aa20.93■□□□□ 0.94
SMIM19-206ENST00000498447 ZHX1Q9UKY1 873 aaPredicted RBP20.93■□□□□ 0.94
SMIM19-206ENST00000498447 FAM184BQ9ULE4 1060 aa20.93■□□□□ 0.94
SMIM19-206ENST00000498447 SYNPO2Q9UMS6 1093 aa20.93■□□□□ 0.94
SMIM19-206ENST00000498447 PQBP1O60828 265 aaKnown RBP20.92■□□□□ 0.94
SMIM19-206ENST00000498447 TTLL1O95922 423 aa20.92■□□□□ 0.94
SMIM19-206ENST00000498447 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.92■□□□□ 0.94
SMIM19-206ENST00000498447 ZNF467Q7Z7K2 595 aaPredicted RBP20.92■□□□□ 0.94
SMIM19-206ENST00000498447 GMCL1P1Q8NEA9 526 aa20.92■□□□□ 0.94
SMIM19-206ENST00000498447 PLIN4Q96Q06 1357 aa20.92■□□□□ 0.94
SMIM19-206ENST00000498447 KIAA0355O15063 1070 aa20.91■□□□□ 0.94
SMIM19-206ENST00000498447 ACLYP53396 1101 aa20.91■□□□□ 0.94
SMIM19-206ENST00000498447 SMAD3P84022 425 aaKnown RBP20.91■□□□□ 0.94
SMIM19-206ENST00000498447 EYSQ5T1H1 3165 aa20.91■□□□□ 0.94
SMIM19-206ENST00000498447 TTC41PQ6P2S7 1318 aa20.91■□□□□ 0.94
SMIM19-206ENST00000498447 KLHDC9Q8NEP7 349 aa20.91■□□□□ 0.94
SMIM19-206ENST00000498447 SEC62Q99442 399 aaKnown RBP20.91■□□□□ 0.94
SMIM19-206ENST00000498447 NACAP1Q9BZK3 213 aa20.91■□□□□ 0.94
SMIM19-206ENST00000498447 STARD7Q9NQZ5 370 aa20.91■□□□□ 0.94
SMIM19-206ENST00000498447 FBXO40Q9UH90 709 aa20.91■□□□□ 0.94
SMIM19-206ENST00000498447 MCM3APO60318 1980 aa20.9■□□□□ 0.94
SMIM19-206ENST00000498447 MOXD2PA6NHM9 499 aa20.9■□□□□ 0.94
SMIM19-206ENST00000498447 TSPY3P0CV98 308 aa20.9■□□□□ 0.94
SMIM19-206ENST00000498447 TSPY8P0CW00 308 aa20.9■□□□□ 0.94
SMIM19-206ENST00000498447 RAG1P15918 1043 aa20.9■□□□□ 0.94
SMIM19-206ENST00000498447 OAZ1P54368 228 aa20.9■□□□□ 0.94
SMIM19-206ENST00000498447 ANKRD35Q8N283 1001 aa20.9■□□□□ 0.94
SMIM19-206ENST00000498447 CHST13Q8NET6 341 aa20.9■□□□□ 0.94
SMIM19-206ENST00000498447 NEDD1Q8NHV4 660 aa20.9■□□□□ 0.94
SMIM19-206ENST00000498447 PI4K2BQ8TCG2 481 aa20.9■□□□□ 0.94
SMIM19-206ENST00000498447 NUP133Q8WUM0 1156 aa20.9■□□□□ 0.94
SMIM19-206ENST00000498447 FGD4Q96M96 766 aa20.9■□□□□ 0.94
SMIM19-206ENST00000498447 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.9■□□□□ 0.94
SMIM19-206ENST00000498447 ERC2O15083 957 aa20.89■□□□□ 0.93
SMIM19-206ENST00000498447 DUSP11O75319 330 aaKnown RBP20.89■□□□□ 0.93
SMIM19-206ENST00000498447 BMP3P12645 472 aa20.89■□□□□ 0.93
SMIM19-206ENST00000498447 EPHB4P54760 987 aa20.89■□□□□ 0.93
SMIM19-206ENST00000498447 PDE4BQ07343 736 aa20.89■□□□□ 0.93
SMIM19-206ENST00000498447 ACVR2BQ13705 512 aa20.89■□□□□ 0.93
SMIM19-206ENST00000498447 KCNA10Q16322 511 aa20.89■□□□□ 0.93
SMIM19-206ENST00000498447 SLFN13Q68D06 897 aa20.89■□□□□ 0.93
SMIM19-206ENST00000498447 CCSAPQ6IQ19 270 aaPredicted RBP20.89■□□□□ 0.93
SMIM19-206ENST00000498447 ANKRD33Q7Z3H0 272 aa20.89■□□□□ 0.93
SMIM19-206ENST00000498447 FSD1Q9BTV5 496 aa20.89■□□□□ 0.93
SMIM19-206ENST00000498447 SEMA6BQ9H3T3 888 aa20.89■□□□□ 0.93
SMIM19-206ENST00000498447 TMEM39AQ9NV64 488 aa20.89■□□□□ 0.93
SMIM19-206ENST00000498447 MYADML2A6NDP7 307 aa20.88■□□□□ 0.93
SMIM19-206ENST00000498447 ADCY6O43306 1168 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms