RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 CNPY2Q9Y2B0 182 aa19.3■□□□□ 0.68
MUC1-220ENST00000498431 COG6Q9Y2V7 657 aa19.3■□□□□ 0.68
MUC1-220ENST00000498431 MYADML2A6NDP7 307 aa19.29■□□□□ 0.68
MUC1-220ENST00000498431 ACLYP53396 1101 aa19.29■□□□□ 0.68
MUC1-220ENST00000498431 FPGSQ05932 587 aa19.29■□□□□ 0.68
MUC1-220ENST00000498431 SNRNP48Q6IEG0 339 aaKnown RBP19.29■□□□□ 0.68
MUC1-220ENST00000498431 ANKRD33Q7Z3H0 272 aa19.29■□□□□ 0.68
MUC1-220ENST00000498431 MIER1Q8N108 512 aa19.29■□□□□ 0.68
MUC1-220ENST00000498431 SLF1Q9BQI6 1058 aa19.29■□□□□ 0.68
MUC1-220ENST00000498431 TTC28Q96AY4 2481 aa19.28■□□□□ 0.68
MUC1-220ENST00000498431 DNAJC25-GNG10A0A024R161 153 aa19.28■□□□□ 0.68
MUC1-220ENST00000498431 ADCY6O43306 1168 aa19.28■□□□□ 0.68
MUC1-220ENST00000498431 RASA1P20936 1047 aa19.28■□□□□ 0.68
MUC1-220ENST00000498431 COPB2P35606 906 aa19.28■□□□□ 0.68
MUC1-220ENST00000498431 CCSAPQ6IQ19 270 aaPredicted RBP19.28■□□□□ 0.68
MUC1-220ENST00000498431 KLHDC9Q8NEP7 349 aa19.28■□□□□ 0.68
MUC1-220ENST00000498431 DDRGK1Q96HY6 314 aa19.28■□□□□ 0.68
MUC1-220ENST00000498431 TSEN34Q9BSV6 310 aaKnown RBP19.28■□□□□ 0.68
MUC1-220ENST00000498431 TEX13BQ9BXU2 312 aa19.28■□□□□ 0.68
MUC1-220ENST00000498431 STARD7Q9NQZ5 370 aa19.28■□□□□ 0.68
MUC1-220ENST00000498431 MCM3APO60318 1980 aa19.27■□□□□ 0.68
MUC1-220ENST00000498431 DNAJB2P25686 324 aa19.27■□□□□ 0.68
MUC1-220ENST00000498431 GRIN2CQ14957 1233 aa19.27■□□□□ 0.68
MUC1-220ENST00000498431 KCNA10Q16322 511 aa19.27■□□□□ 0.68
MUC1-220ENST00000498431 USP38Q8NB14 1042 aa19.27■□□□□ 0.68
MUC1-220ENST00000498431 TOX2Q96NM4 488 aa19.27■□□□□ 0.68
MUC1-220ENST00000498431 ZHX1Q9UKY1 873 aaPredicted RBP19.27■□□□□ 0.68
MUC1-220ENST00000498431 SYNGAP1Q96PV0 1343 aa19.26■□□□□ 0.67
MUC1-220ENST00000498431 TMEM265A0A087WTH1 108 aa19.26■□□□□ 0.67
MUC1-220ENST00000498431 DCDC2CA8MYV0 355 aa19.26■□□□□ 0.67
MUC1-220ENST00000498431 F5H6K3 240 aa19.26■□□□□ 0.67
MUC1-220ENST00000498431 SMARCA5O60264 1052 aaPredicted RBP19.26■□□□□ 0.67
MUC1-220ENST00000498431 NDUFB10O96000 172 aa19.26■□□□□ 0.67
MUC1-220ENST00000498431 SLC4A3P48751 1232 aa19.26■□□□□ 0.67
MUC1-220ENST00000498431 KLRC3Q07444 240 aa19.26■□□□□ 0.67
MUC1-220ENST00000498431 MAMDC4Q6UXC1 1216 aa19.26■□□□□ 0.67
MUC1-220ENST00000498431 DDX11Q96FC9 970 aa19.26■□□□□ 0.67
MUC1-220ENST00000498431 FGD4Q96M96 766 aa19.26■□□□□ 0.67
MUC1-220ENST00000498431 STRBPQ96SI9 672 aaKnown RBP19.26■□□□□ 0.67
MUC1-220ENST00000498431 NYAP2Q9P242 653 aa19.26■□□□□ 0.67
MUC1-220ENST00000498431 CHD7Q9P2D1 2997 aa19.26■□□□□ 0.67
MUC1-220ENST00000498431 ARPP21Q9UBL0 812 aaPredicted RBP19.26■□□□□ 0.67
MUC1-220ENST00000498431 TBX21Q9UL17 535 aa19.26■□□□□ 0.67
MUC1-220ENST00000498431 FAM184BQ9ULE4 1060 aa19.26■□□□□ 0.67
MUC1-220ENST00000498431 DDX19BQ9UMR2 479 aa19.26■□□□□ 0.67
MUC1-220ENST00000498431 MYH4Q9Y623 1939 aa19.25■□□□□ 0.67
MUC1-220ENST00000498431 GSG1L2A8MUP6 293 aa19.25■□□□□ 0.67
MUC1-220ENST00000498431 SBK1Q52WX2 424 aa19.25■□□□□ 0.67
MUC1-220ENST00000498431 CPXCR1Q8N123 301 aa19.25■□□□□ 0.67
MUC1-220ENST00000498431 MSL3Q8N5Y2 521 aaKnown RBP19.25■□□□□ 0.67
MUC1-220ENST00000498431 NUP133Q8WUM0 1156 aa19.25■□□□□ 0.67
MUC1-220ENST00000498431 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.25■□□□□ 0.67
MUC1-220ENST00000498431 REV3LO60673 3130 aa19.24■□□□□ 0.67
MUC1-220ENST00000498431 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.24■□□□□ 0.67
MUC1-220ENST00000498431 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.24■□□□□ 0.67
MUC1-220ENST00000498431 MOXD2PA6NHM9 499 aa19.24■□□□□ 0.67
MUC1-220ENST00000498431 DUSP11O75319 330 aaKnown RBP19.24■□□□□ 0.67
MUC1-220ENST00000498431 TIMP1P01033 207 aa19.24■□□□□ 0.67
MUC1-220ENST00000498431 MS4A1P11836 297 aa19.24■□□□□ 0.67
MUC1-220ENST00000498431 ZSCAN25Q6NSZ9 544 aa19.24■□□□□ 0.67
MUC1-220ENST00000498431 C16orf59Q7L2K0 433 aa19.24■□□□□ 0.67
MUC1-220ENST00000498431 PRPF38AQ8NAV1 312 aaKnown RBP19.24■□□□□ 0.67
MUC1-220ENST00000498431 RAVER2Q9HCJ3 691 aaKnown RBP19.24■□□□□ 0.67
MUC1-220ENST00000498431 IGKV6D-41A0A0C4DH26 115 aa19.23■□□□□ 0.67
MUC1-220ENST00000498431 MINDY4BA8MYZ0 360 aa19.23■□□□□ 0.67
MUC1-220ENST00000498431 ATP2A1O14983 1001 aa19.23■□□□□ 0.67
MUC1-220ENST00000498431 C6orf222P0C671 652 aaPredicted RBP19.23■□□□□ 0.67
MUC1-220ENST00000498431 CDK7P50613 346 aa19.23■□□□□ 0.67
MUC1-220ENST00000498431 ACVR2BQ13705 512 aa19.23■□□□□ 0.67
MUC1-220ENST00000498431 OSBP2Q969R2 916 aa19.23■□□□□ 0.67
MUC1-220ENST00000498431 KIFC2Q96AC6 838 aa19.23■□□□□ 0.67
MUC1-220ENST00000498431 MKNK2Q9HBH9 465 aa19.23■□□□□ 0.67
MUC1-220ENST00000498431 EPB41L4AQ9HCS5 686 aaPredicted RBP19.23■□□□□ 0.67
MUC1-220ENST00000498431 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.23■□□□□ 0.67
MUC1-220ENST00000498431 CLIP2Q9UDT6 1046 aa19.23■□□□□ 0.67
MUC1-220ENST00000498431 GRXCR1A8MXD5 290 aa19.22■□□□□ 0.67
MUC1-220ENST00000498431 PRDM1O75626 825 aa19.22■□□□□ 0.67
MUC1-220ENST00000498431 ASGR1P07306 291 aa19.22■□□□□ 0.67
MUC1-220ENST00000498431 CST5P28325 142 aaPredicted RBP19.22■□□□□ 0.67
MUC1-220ENST00000498431 CCDC144BQ3MJ40 725 aa19.22■□□□□ 0.67
MUC1-220ENST00000498431 MFSD5Q6N075 450 aa19.22■□□□□ 0.67
MUC1-220ENST00000498431 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.22■□□□□ 0.67
MUC1-220ENST00000498431 ZNF467Q7Z7K2 595 aaPredicted RBP19.22■□□□□ 0.67
MUC1-220ENST00000498431 LRRCC1Q9C099 1032 aa19.22■□□□□ 0.67
MUC1-220ENST00000498431 ZNF576Q9H609 170 aa19.22■□□□□ 0.67
MUC1-220ENST00000498431 SLC38A10Q9HBR0 1119 aa19.22■□□□□ 0.67
MUC1-220ENST00000498431 ZBED4O75132 1171 aa19.21■□□□□ 0.67
MUC1-220ENST00000498431 PBX2P40425 430 aa19.21■□□□□ 0.67
MUC1-220ENST00000498431 TMEM240Q5SV17 173 aa19.21■□□□□ 0.67
MUC1-220ENST00000498431 ARMCX2Q7L311 632 aa19.21■□□□□ 0.67
MUC1-220ENST00000498431 TIFAQ96CG3 184 aa19.21■□□□□ 0.67
MUC1-220ENST00000498431 CEP95Q96GE4 821 aa19.21■□□□□ 0.67
MUC1-220ENST00000498431 GLT1D1Q96MS3 346 aa19.21■□□□□ 0.67
MUC1-220ENST00000498431 UPF3AQ9H1J1 476 aaKnown RBP19.21■□□□□ 0.67
MUC1-220ENST00000498431 PRDM6Q9NQX0 595 aa19.21■□□□□ 0.67
MUC1-220ENST00000498431 ELP1O95163 1332 aa19.21■□□□□ 0.67
MUC1-220ENST00000498431 CTAGE5O15320 804 aa19.2■□□□□ 0.66
MUC1-220ENST00000498431 ACRP10323 421 aa19.2■□□□□ 0.66
MUC1-220ENST00000498431 CSF2RAP15509 400 aa19.2■□□□□ 0.66
MUC1-220ENST00000498431 GJA9P57773 515 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms