RNA–Protein interactions for RNA: ENST00000497807.1

MACF1-225, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MACF1, Length 2,689 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-225ENST00000497807 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.6□□□□□ -0.39
MACF1-225ENST00000497807 SEPT10Q9P0V9 454 aa12.6□□□□□ -0.39
MACF1-225ENST00000497807 CORO1CQ9ULV4 474 aaPredicted RBP12.6□□□□□ -0.39
MACF1-225ENST00000497807 BZW2Q9Y6E2 419 aaKnown RBP12.6□□□□□ -0.39
MACF1-225ENST00000497807 RPAP1Q9BWH6 1393 aaPredicted RBP12.6□□□□□ -0.39
MACF1-225ENST00000497807 ELP1O95163 1332 aa12.6□□□□□ -0.39
MACF1-225ENST00000497807 ZNF521Q96K83 1311 aa12.6□□□□□ -0.39
MACF1-225ENST00000497807 GOLGA6L10A0A0M3HER8 536 aa12.6□□□□□ -0.39
MACF1-225ENST00000497807 TTI1O43156 1089 aa12.6□□□□□ -0.39
MACF1-225ENST00000497807 BCRP11274 1271 aa12.6□□□□□ -0.39
MACF1-225ENST00000497807 EZRP15311 586 aaKnown RBP12.6□□□□□ -0.39
MACF1-225ENST00000497807 OXCT1P55809 520 aa12.6□□□□□ -0.39
MACF1-225ENST00000497807 POLA2Q14181 598 aa12.6□□□□□ -0.39
MACF1-225ENST00000497807 XPO4Q9C0E2 1151 aaKnown RBP12.6□□□□□ -0.39
MACF1-225ENST00000497807 ELL2O00472 640 aaPredicted RBP12.59□□□□□ -0.39
MACF1-225ENST00000497807 SLU7O95391 586 aaKnown RBP12.59□□□□□ -0.39
MACF1-225ENST00000497807 TUBA1BP68363 451 aa12.59□□□□□ -0.39
MACF1-225ENST00000497807 NCCRP1Q6ZVX7 275 aaPredicted RBP12.59□□□□□ -0.39
MACF1-225ENST00000497807 TUBA1AQ71U36 451 aa12.59□□□□□ -0.39
MACF1-225ENST00000497807 ESX1Q8N693 406 aa12.59□□□□□ -0.39
MACF1-225ENST00000497807 APPBP2Q92624 585 aa12.59□□□□□ -0.39
MACF1-225ENST00000497807 ZNF496Q96IT1 587 aaPredicted RBP12.59□□□□□ -0.39
MACF1-225ENST00000497807 TTC14Q96N46 770 aa12.59□□□□□ -0.39
MACF1-225ENST00000497807 UROC1Q96N76 676 aa12.59□□□□□ -0.39
MACF1-225ENST00000497807 ZWILCHQ9H900 591 aa12.59□□□□□ -0.39
MACF1-225ENST00000497807 LIN7AO14910 233 aaPredicted RBP12.59□□□□□ -0.39
MACF1-225ENST00000497807 HOXA2O43364 376 aa12.59□□□□□ -0.39
MACF1-225ENST00000497807 GNAT2P19087 354 aa12.59□□□□□ -0.39
MACF1-225ENST00000497807 S100A5P33763 92 aa12.59□□□□□ -0.39
MACF1-225ENST00000497807 LIG3P49916 1009 aa12.59□□□□□ -0.39
MACF1-225ENST00000497807 FAM160A1Q05DH4 1040 aa12.59□□□□□ -0.39
MACF1-225ENST00000497807 PPIDQ08752 370 aaKnown RBP12.59□□□□□ -0.39
MACF1-225ENST00000497807 SVIPQ8NHG7 77 aa12.59□□□□□ -0.39
MACF1-225ENST00000497807 GSDMBQ8TAX9 411 aa12.59□□□□□ -0.39
MACF1-225ENST00000497807 NAF1Q96HR8 494 aaKnown RBP12.59□□□□□ -0.39
MACF1-225ENST00000497807 DKK3Q9UBP4 350 aa12.59□□□□□ -0.39
MACF1-225ENST00000497807 CLASP2O75122 1294 aaKnown RBP12.58□□□□□ -0.4
MACF1-225ENST00000497807 EN1Q05925 392 aaPredicted RBP12.58□□□□□ -0.4
MACF1-225ENST00000497807 KRT24Q2M2I5 525 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 KAZNQ674X7 775 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 KANK3Q6NY19 840 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 ZNF804AQ7Z570 1209 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 DEFB132Q7Z7B7 95 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 NT5DC4Q86YG4 428 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 ARL6IP6Q8N6S5 226 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 ANKRD49Q8WVL7 239 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 PPP2R3CQ969Q6 453 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 HVCN1Q96D96 273 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 ZMAT2Q96NC0 199 aaKnown RBP12.58□□□□□ -0.4
MACF1-225ENST00000497807 ACBD3Q9H3P7 528 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 ZCCHC17Q9NP64 241 aaKnown RBP12.58□□□□□ -0.4
MACF1-225ENST00000497807 SFMBT1Q9UHJ3 866 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 GJA3Q9Y6H8 435 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 GOLGA6L4A6NEF3 574 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 A6NJR5 290 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 NDUFB5O43674 189 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 TBC1D12O60347 775 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 PDGFRBP09619 1106 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 MAP7D1Q3KQU3 841 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 WDR75Q8IWA0 830 aaKnown RBP12.58□□□□□ -0.4
MACF1-225ENST00000497807 USP6NLQ92738 828 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 HOOK2Q96ED9 719 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 LUC7L2Q9Y383 392 aaKnown RBP12.58□□□□□ -0.4
MACF1-225ENST00000497807 CHMP3Q9Y3E7 222 aa12.58□□□□□ -0.4
MACF1-225ENST00000497807 ATXN2Q99700 1313 aaKnown RBP12.58□□□□□ -0.4
MACF1-225ENST00000497807 A0A0B4J203 849 aa12.57□□□□□ -0.4
MACF1-225ENST00000497807 FOXD2O60548 495 aaPredicted RBP12.57□□□□□ -0.4
MACF1-225ENST00000497807 PENKP01210 267 aaPredicted RBP12.57□□□□□ -0.4
MACF1-225ENST00000497807 HSPA8P11142 646 aaKnown RBP12.57□□□□□ -0.4
MACF1-225ENST00000497807 SLFN5Q08AF3 891 aa12.57□□□□□ -0.4
MACF1-225ENST00000497807 NBPF14Q5TI25 921 aa12.57□□□□□ -0.4
MACF1-225ENST00000497807 FIP1L1Q6UN15 594 aaKnown RBP12.57□□□□□ -0.4
MACF1-225ENST00000497807 KRI1Q8N9T8 703 aaKnown RBP12.57□□□□□ -0.4
MACF1-225ENST00000497807 UPF1Q92900 1129 aaKnown RBP eCLIP12.57□□□□□ -0.4
MACF1-225ENST00000497807 PPP1R14BQ96C90 147 aa12.57□□□□□ -0.4
MACF1-225ENST00000497807 VPS33BQ9H267 617 aa12.57□□□□□ -0.4
MACF1-225ENST00000497807 KCNF1Q9H3M0 494 aa12.57□□□□□ -0.4
MACF1-225ENST00000497807 LMBRD1Q9NUN5 540 aa12.57□□□□□ -0.4
MACF1-225ENST00000497807 PALLDQ8WX93 1383 aa12.57□□□□□ -0.4
MACF1-225ENST00000497807 TARSL2A2RTX5 802 aaKnown RBP12.57□□□□□ -0.4
MACF1-225ENST00000497807 PDE6BP35913 854 aa12.57□□□□□ -0.4
MACF1-225ENST00000497807 CBX3Q13185 183 aa12.57□□□□□ -0.4
MACF1-225ENST00000497807 CAMK2BQ13554 666 aa12.57□□□□□ -0.4
MACF1-225ENST00000497807 SLMAPQ14BN4 828 aa12.57□□□□□ -0.4
MACF1-225ENST00000497807 LILRB1Q8NHL6 650 aaPredicted RBP12.57□□□□□ -0.4
MACF1-225ENST00000497807 ACMSDQ8TDX5 336 aa12.57□□□□□ -0.4
MACF1-225ENST00000497807 EPSTI1Q96J88 318 aa12.57□□□□□ -0.4
MACF1-225ENST00000497807 TSPY26PQ9H489 355 aa12.57□□□□□ -0.4
MACF1-225ENST00000497807 PRR12Q9ULL5 1215 aa12.57□□□□□ -0.4
MACF1-225ENST00000497807 NOSIPQ9Y314 301 aaKnown RBP12.57□□□□□ -0.4
MACF1-225ENST00000497807 LOC102724428A0A0B4J2F2 783 aa12.56□□□□□ -0.4
MACF1-225ENST00000497807 FRMD3A2A2Y4 597 aa12.56□□□□□ -0.4
MACF1-225ENST00000497807 SMNDC1O75940 238 aaKnown RBP eCLIP12.56□□□□□ -0.4
MACF1-225ENST00000497807 SIK1P57059 783 aa12.56□□□□□ -0.4
MACF1-225ENST00000497807 EIF4A1P60842 406 aaKnown RBP12.56□□□□□ -0.4
MACF1-225ENST00000497807 DYNC1I2Q13409 638 aaKnown RBP12.56□□□□□ -0.4
MACF1-225ENST00000497807 CCDC50Q8IVM0 306 aa12.56□□□□□ -0.4
MACF1-225ENST00000497807 TRIM58Q8NG06 486 aa12.56□□□□□ -0.4
MACF1-225ENST00000497807 SMARCC2Q8TAQ2 1214 aa12.56□□□□□ -0.4
MACF1-225ENST00000497807 SLC39A2Q9NP94 309 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms