RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 TRIM22Q8IYM9 498 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 RSRC1Q96IZ7 334 aaKnown RBP14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 AGPAT5Q9NUQ2 364 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 STIM2Q9P246 746 aa14.57□□□□□ -0.08
GAPVD1-220ENST00000497580 KLK7P49862 253 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 SKOR1P84550 965 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 CRYMQ14894 314 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 PPP1R7Q15435 360 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 ZNF174Q15697 407 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 NT5DC1Q5TFE4 455 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 FUKQ8N0W3 1084 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 MICAL1Q8TDZ2 1067 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 EPB41L5Q9HCM4 733 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 RASSF9O75901 435 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 CHRNA2Q15822 529 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 TCP11X2Q5H9J9 407 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 HIBCHQ6NVY1 386 aaPredicted RBP14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 CABLES1Q8TDN4 633 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 TCP11Q8WWU5 503 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 DDX17Q92841 729 aaKnown RBP14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 CYFIP2Q96F07 1278 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 MS4A14Q96JA4 679 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 ORAI2Q96SN7 254 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 TMEM2Q9UHN6 1383 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 EME2A4GXA9 379 aaPredicted RBP14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 ERCC3P19447 782 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 TMOD1P28289 359 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 MAP2K1Q02750 393 aaPredicted RBP14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 RILPL1Q5EBL4 403 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 OR2W6PQ8NHA6 318 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 CAPN6Q9Y6Q1 641 aa14.56□□□□□ -0.08
GAPVD1-220ENST00000497580 TACC1O75410 805 aa14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 ADORA1P30542 326 aa14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 TRIM14Q14142 442 aa14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 AKAP4Q5JQC9 854 aa14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 ALS2CLQ60I27 953 aa14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 TACO1Q9BSH4 297 aaKnown RBP14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 PUS3Q9BZE2 481 aaKnown RBP14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 CLTAP09496 248 aa14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 MDH1P40925 334 aaKnown RBP14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 METTL22Q9BUU2 404 aaPredicted RBP14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 NHEJ1Q9H9Q4 299 aaPredicted RBP14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 ZNF233A6NK53 670 aa14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 B4DLN1 442 aa14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 IDH1O75874 414 aaKnown RBP14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 ZAP70P43403 619 aa14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 FAM228AQ86W67 206 aa14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 PROSER2Q86WR7 435 aaPredicted RBP14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 ZBTB10Q96DT7 871 aa14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 ZNF496Q96IT1 587 aaPredicted RBP14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 CCDC42Q96M95 316 aa14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 C3P01024 1663 aa14.55□□□□□ -0.08
GAPVD1-220ENST00000497580 ITIH6Q6UXX5 1313 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 CACNA1FO60840 1977 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 DNM1LO00429 736 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 SH2B2O14492 632 aaPredicted RBP14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 FOXP2O15409 715 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 BUB1O43683 1085 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 SPAG1Q07617 926 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 TYW1BQ6NUM6 668 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 EMBQ6PCB8 327 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 TRIM47Q96LD4 638 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 RBM12Q9NTZ6 932 aaKnown RBP14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 MAGEC2Q9UBF1 373 aaPredicted RBP14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 CEP131Q9UPN4 1083 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 TRIM75PA6NK02 468 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 HEXIM1O94992 359 aaKnown RBP14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 MMP1P03956 469 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 PLEKP08567 350 aaPredicted RBP14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 PARP1P09874 1014 aaKnown RBP14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 CREG2Q8IUH2 290 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 PLIN2Q99541 437 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 SRPRBQ9Y5M8 271 aaKnown RBP14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 MYBL1P10243 752 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 AP1ARQ63HQ0 302 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 HAUS3Q68CZ6 603 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 CPLX4Q7Z7G2 160 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 TBC1D22AQ8WUA7 517 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 STAMBPL1Q96FJ0 436 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 SNX12Q9UMY4 172 aa14.54□□□□□ -0.08
GAPVD1-220ENST00000497580 TBC1D8BQ0IIM8 1120 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 SCARF1Q14162 830 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 WLSQ5T9L3 541 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 TMED8Q6PL24 325 aaPredicted RBP14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 KDM7AQ6ZMT4 941 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 PROCA1Q8NCQ7 364 aaPredicted RBP14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 IP6K1Q92551 441 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 UTYO14607 1347 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 RFX7Q2KHR2 1363 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 CEMIPQ8WUJ3 1361 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 FAM107AO95990 144 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 TRADDQ15628 312 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 QPCTQ16769 361 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 PTPROQ16827 1216 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 WDR59Q6PJI9 974 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 NSMCE1Q8WV22 266 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 SPATS2LQ9NUQ6 558 aaKnown RBP14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 ITSN1Q15811 1721 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 A6NNZ2 444 aa14.53□□□□□ -0.08
GAPVD1-220ENST00000497580 USO1O60763 962 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms