RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 DSG3P32926 999 aa22.92■■□□□ 1.26
SCAMP3-209ENST00000497470 ADD1P35611 737 aaKnown RBP22.92■■□□□ 1.26
SCAMP3-209ENST00000497470 OAZ1P54368 228 aa22.92■■□□□ 1.26
SCAMP3-209ENST00000497470 HMGN5P82970 282 aaKnown RBP22.92■■□□□ 1.26
SCAMP3-209ENST00000497470 GADL1Q6ZQY3 521 aa22.92■■□□□ 1.26
SCAMP3-209ENST00000497470 STAG2Q8N3U4 1231 aa22.92■■□□□ 1.26
SCAMP3-209ENST00000497470 NAP1L2Q9ULW6 460 aaPredicted RBP22.92■■□□□ 1.26
SCAMP3-209ENST00000497470 RBM19Q9Y4C8 960 aaKnown RBP22.92■■□□□ 1.26
SCAMP3-209ENST00000497470 hCG_1984214I3L0E3 225 aa22.91■■□□□ 1.26
SCAMP3-209ENST00000497470 PRPF3O43395 683 aaKnown RBP22.91■■□□□ 1.26
SCAMP3-209ENST00000497470 LARGE1O95461 756 aa22.91■■□□□ 1.26
SCAMP3-209ENST00000497470 PDIA4P13667 645 aaKnown RBP22.91■■□□□ 1.26
SCAMP3-209ENST00000497470 SYDE2Q5VT97 1194 aa22.91■■□□□ 1.26
SCAMP3-209ENST00000497470 KCTD1Q719H9 257 aa22.91■■□□□ 1.26
SCAMP3-209ENST00000497470 ZNF713Q8N859 430 aaPredicted RBP22.91■■□□□ 1.26
SCAMP3-209ENST00000497470 SMARCC2Q8TAQ2 1214 aa22.91■■□□□ 1.26
SCAMP3-209ENST00000497470 CFHR5Q9BXR6 569 aa22.91■■□□□ 1.26
SCAMP3-209ENST00000497470 WDR33Q9C0J8 1336 aaKnown RBP22.9■■□□□ 1.26
SCAMP3-209ENST00000497470 BTBD19C9JJ37 291 aa22.9■■□□□ 1.26
SCAMP3-209ENST00000497470 GCLCP48506 637 aaPredicted RBP22.9■■□□□ 1.26
SCAMP3-209ENST00000497470 CCT2P78371 535 aaKnown RBP22.9■■□□□ 1.26
SCAMP3-209ENST00000497470 TREML2Q5T2D2 321 aa22.9■■□□□ 1.26
SCAMP3-209ENST00000497470 CYP4F22Q6NT55 531 aa22.9■■□□□ 1.26
SCAMP3-209ENST00000497470 NBPF11Q86T75 865 aa22.9■■□□□ 1.26
SCAMP3-209ENST00000497470 TRIM22Q8IYM9 498 aa22.9■■□□□ 1.26
SCAMP3-209ENST00000497470 SRBD1Q8N5C6 995 aaKnown RBP22.9■■□□□ 1.26
SCAMP3-209ENST00000497470 TANGO6Q9C0B7 1094 aa22.9■■□□□ 1.26
SCAMP3-209ENST00000497470 KIF3AQ9Y496 699 aa22.9■■□□□ 1.26
SCAMP3-209ENST00000497470 THSD7BQ9C0I4 1608 aa22.9■■□□□ 1.26
SCAMP3-209ENST00000497470 CYTH3O43739 400 aa22.89■■□□□ 1.25
SCAMP3-209ENST00000497470 RAD21O60216 631 aa22.89■■□□□ 1.25
SCAMP3-209ENST00000497470 FLOT1O75955 427 aa22.89■■□□□ 1.25
SCAMP3-209ENST00000497470 FMNL1O95466 1100 aaPredicted RBP22.89■■□□□ 1.25
SCAMP3-209ENST00000497470 RXRAP19793 462 aa22.89■■□□□ 1.25
SCAMP3-209ENST00000497470 IRX3P78415 501 aaPredicted RBP22.89■■□□□ 1.25
SCAMP3-209ENST00000497470 IFNL1Q8IU54 200 aa22.89■■□□□ 1.25
SCAMP3-209ENST00000497470 ADGRF4Q8IZF3 695 aa22.89■■□□□ 1.25
SCAMP3-209ENST00000497470 NUP88Q99567 741 aaPredicted RBP22.89■■□□□ 1.25
SCAMP3-209ENST00000497470 PTPN18Q99952 460 aa22.89■■□□□ 1.25
SCAMP3-209ENST00000497470 LARP6Q9BRS8 491 aaKnown RBP22.89■■□□□ 1.25
SCAMP3-209ENST00000497470 ASCC2Q9H1I8 757 aaPredicted RBP22.89■■□□□ 1.25
SCAMP3-209ENST00000497470 RANBP17Q9H2T7 1088 aaKnown RBP22.89■■□□□ 1.25
SCAMP3-209ENST00000497470 GPCPD1Q9NPB8 672 aa22.89■■□□□ 1.25
SCAMP3-209ENST00000497470 PRR12Q9ULL5 1215 aa22.89■■□□□ 1.25
SCAMP3-209ENST00000497470 RLFQ13129 1914 aa22.88■■□□□ 1.25
SCAMP3-209ENST00000497470 FRMPD2Q68DX3 1309 aaPredicted RBP22.88■■□□□ 1.25
SCAMP3-209ENST00000497470 CNTNAP5Q8WYK1 1306 aa22.88■■□□□ 1.25
SCAMP3-209ENST00000497470 PDHXO00330 501 aa22.88■■□□□ 1.25
SCAMP3-209ENST00000497470 GOLGA8HP0CJ92 632 aa22.88■■□□□ 1.25
SCAMP3-209ENST00000497470 KIF23Q02241 960 aaPredicted RBP22.88■■□□□ 1.25
SCAMP3-209ENST00000497470 ST3GAL1Q11201 340 aa22.88■■□□□ 1.25
SCAMP3-209ENST00000497470 STK3Q13188 491 aa22.88■■□□□ 1.25
SCAMP3-209ENST00000497470 TTBK2Q6IQ55 1244 aa22.88■■□□□ 1.25
SCAMP3-209ENST00000497470 NSUN7Q8NE18 718 aaKnown RBP22.88■■□□□ 1.25
SCAMP3-209ENST00000497470 WASF1Q92558 559 aa22.88■■□□□ 1.25
SCAMP3-209ENST00000497470 RRP36Q96EU6 259 aaKnown RBP22.88■■□□□ 1.25
SCAMP3-209ENST00000497470 PARK7Q99497 189 aaKnown RBP22.88■■□□□ 1.25
SCAMP3-209ENST00000497470 JMJD4Q9H9V9 463 aa22.88■■□□□ 1.25
SCAMP3-209ENST00000497470 SLC38A10Q9HBR0 1119 aa22.88■■□□□ 1.25
SCAMP3-209ENST00000497470 NCOA5Q9HCD5 579 aaKnown RBP22.88■■□□□ 1.25
SCAMP3-209ENST00000497470 PNMA6FA0A0J9YX94 578 aa22.87■■□□□ 1.25
SCAMP3-209ENST00000497470 SPDYE16A6NNV3 312 aaPredicted RBP22.87■■□□□ 1.25
SCAMP3-209ENST00000497470 VWA5AO00534 786 aa22.87■■□□□ 1.25
SCAMP3-209ENST00000497470 ZBTB5O15062 677 aa22.87■■□□□ 1.25
SCAMP3-209ENST00000497470 PLEKHA8P1O95397 391 aa22.87■■□□□ 1.25
SCAMP3-209ENST00000497470 DEXIO95424 95 aa22.87■■□□□ 1.25
SCAMP3-209ENST00000497470 CTDNEP1O95476 244 aa22.87■■□□□ 1.25
SCAMP3-209ENST00000497470 SSRP1Q08945 709 aaKnown RBP22.87■■□□□ 1.25
SCAMP3-209ENST00000497470 NOL8Q76FK4 1167 aaKnown RBP22.87■■□□□ 1.25
SCAMP3-209ENST00000497470 CCDC83Q8IWF9 413 aa22.87■■□□□ 1.25
SCAMP3-209ENST00000497470 CCDC144CPQ8IYA2 1237 aa22.87■■□□□ 1.25
SCAMP3-209ENST00000497470 MTMR7Q9Y216 660 aa22.87■■□□□ 1.25
SCAMP3-209ENST00000497470 RABGAP1Q9Y3P9 1069 aa22.87■■□□□ 1.25
SCAMP3-209ENST00000497470 PARP14Q460N5 1801 aa22.87■■□□□ 1.25
SCAMP3-209ENST00000497470 ZBED4O75132 1171 aa22.86■■□□□ 1.25
SCAMP3-209ENST00000497470 COPB2P35606 906 aa22.86■■□□□ 1.25
SCAMP3-209ENST00000497470 VEGFBP49765 207 aa22.86■■□□□ 1.25
SCAMP3-209ENST00000497470 AKAP17AQ02040 695 aaKnown RBP22.86■■□□□ 1.25
SCAMP3-209ENST00000497470 IKQ13123 557 aaPredicted RBP22.86■■□□□ 1.25
SCAMP3-209ENST00000497470 SLC35G1Q2M3R5 365 aa22.86■■□□□ 1.25
SCAMP3-209ENST00000497470 FAM43AQ8N2R8 423 aa22.86■■□□□ 1.25
SCAMP3-209ENST00000497470 SAMD3Q8N6K7 520 aa22.86■■□□□ 1.25
SCAMP3-209ENST00000497470 NECAB1Q8N987 351 aa22.86■■□□□ 1.25
SCAMP3-209ENST00000497470 HERVK_113P62684 666 aa22.85■■□□□ 1.25
SCAMP3-209ENST00000497470 DGKZQ13574 1117 aa22.85■■□□□ 1.25
SCAMP3-209ENST00000497470 PAXIP1Q6ZW49 1069 aaPredicted RBP22.85■■□□□ 1.25
SCAMP3-209ENST00000497470 RASGRP2Q7LDG7 609 aa22.85■■□□□ 1.25
SCAMP3-209ENST00000497470 REPS2Q8NFH8 660 aa22.85■■□□□ 1.25
SCAMP3-209ENST00000497470 P2RX7Q99572 595 aaKnown RBP22.85■■□□□ 1.25
SCAMP3-209ENST00000497470 UBA5Q9GZZ9 404 aa22.85■■□□□ 1.25
SCAMP3-209ENST00000497470 SH3GLB2Q9NR46 395 aa22.85■■□□□ 1.25
SCAMP3-209ENST00000497470 FBXO28Q9NVF7 368 aa22.85■■□□□ 1.25
SCAMP3-209ENST00000497470 MORF4L1Q9UBU8 362 aa22.85■■□□□ 1.25
SCAMP3-209ENST00000497470 SEC63Q9UGP8 760 aaKnown RBP22.85■■□□□ 1.25
SCAMP3-209ENST00000497470 IGF2BP3O00425 579 aaKnown RBP eCLIP22.84■■□□□ 1.25
SCAMP3-209ENST00000497470 CA12O43570 354 aa22.84■■□□□ 1.25
SCAMP3-209ENST00000497470 ICAM1P05362 532 aa22.84■■□□□ 1.25
SCAMP3-209ENST00000497470 MKRN3Q13064 507 aaKnown RBP22.84■■□□□ 1.25
SCAMP3-209ENST00000497470 PFKFB3Q16875 520 aaPredicted RBP22.84■■□□□ 1.25
SCAMP3-209ENST00000497470 TKFCQ3LXA3 575 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms