RNA–Protein interactions for RNA: ENST00000497044.5

SHTN1-206, Transcript of shootin 1, humanhuman

TSL 2

Gene SHTN1, Length 3,647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-206ENST00000497044 TRAF5O00463 557 aa3.92□□□□□ -1.78
SHTN1-206ENST00000497044 ANP32CO43423 234 aa3.92□□□□□ -1.78
SHTN1-206ENST00000497044 ZIC2O95409 532 aaPredicted RBP3.92□□□□□ -1.78
SHTN1-206ENST00000497044 COL6A1P12109 1028 aa3.92□□□□□ -1.78
SHTN1-206ENST00000497044 XRCC5P13010 732 aaKnown RBP3.92□□□□□ -1.78
SHTN1-206ENST00000497044 MSX1P28360 303 aa3.92□□□□□ -1.78
SHTN1-206ENST00000497044 SCARF1Q14162 830 aa3.92□□□□□ -1.78
SHTN1-206ENST00000497044 ZBTB38Q8NAP3 1195 aaPredicted RBP3.92□□□□□ -1.78
SHTN1-206ENST00000497044 EHBP1Q8NDI1 1231 aa3.92□□□□□ -1.78
SHTN1-206ENST00000497044 TDRD7Q8NHU6 1098 aaKnown RBP3.92□□□□□ -1.78
SHTN1-206ENST00000497044 BRINP2Q9C0B6 783 aa3.92□□□□□ -1.78
SHTN1-206ENST00000497044 BCL11AQ9H165 835 aa3.92□□□□□ -1.78
SHTN1-206ENST00000497044 SUV39H2Q9H5I1 410 aa3.92□□□□□ -1.78
SHTN1-206ENST00000497044 KLK14Q9P0G3 267 aa3.92□□□□□ -1.78
SHTN1-206ENST00000497044 SRRDQ9UH36 339 aa3.92□□□□□ -1.78
SHTN1-206ENST00000497044 IL16Q14005 1332 aa3.92□□□□□ -1.78
SHTN1-206ENST00000497044 SALL1Q9NSC2 1324 aa3.92□□□□□ -1.78
SHTN1-206ENST00000497044 NDUFB5O43674 189 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 FAM157BP0CG42 384 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 CANXP27824 592 aaKnown RBP3.91□□□□□ -1.78
SHTN1-206ENST00000497044 GRM2Q14416 872 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 AOC3Q16853 763 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 RASIP1Q5U651 963 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 GIMAP6Q6P9H5 292 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 NOP9Q86U38 636 aaKnown RBP3.91□□□□□ -1.78
SHTN1-206ENST00000497044 ATXN2LQ8WWM7 1075 aaKnown RBP3.91□□□□□ -1.78
SHTN1-206ENST00000497044 CCDC74AQ96AQ1 378 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 CDC5LQ99459 802 aaKnown RBP3.91□□□□□ -1.78
SHTN1-206ENST00000497044 HINFPQ9BQA5 517 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 FOXD3Q9UJU5 478 aaPredicted RBP3.91□□□□□ -1.78
SHTN1-206ENST00000497044 OGDHLQ9ULD0 1010 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 PARP14Q460N5 1801 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 ZBTB42B2RXF5 422 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 TLR2O60603 784 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 RPLP1P05386 114 aaKnown RBP3.91□□□□□ -1.78
SHTN1-206ENST00000497044 IRS1P35568 1242 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 PTPN5P54829 565 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 PKN1Q16512 942 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 NANOS1Q8WY41 292 aaKnown RBP3.91□□□□□ -1.78
SHTN1-206ENST00000497044 TANGO6Q9C0B7 1094 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 PIF1Q9H611 641 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 RAB6BQ9NRW1 208 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 GGA1Q9UJY5 639 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 RBM19Q9Y4C8 960 aaKnown RBP3.91□□□□□ -1.78
SHTN1-206ENST00000497044 LRRC37A2A6NM11 1700 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 PPP1R12BO60237 982 aaPredicted RBP3.91□□□□□ -1.78
SHTN1-206ENST00000497044 PDE8AO60658 829 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 BCRP11274 1271 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 SOX10P56693 466 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 CCDC152Q4G0S7 254 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 MAP3K21Q5TCX8 1036 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 SLITRK4Q8IW52 837 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 C1QTNF1Q9BXJ1 281 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.91□□□□□ -1.783e-6■■■■■ 67.1
SHTN1-206ENST00000497044 MTMR10Q9NXD2 777 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 KLF15Q9UIH9 416 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 DYRK1BQ9Y463 629 aa3.91□□□□□ -1.78
SHTN1-206ENST00000497044 DDX10Q13206 875 aaKnown RBP3.9□□□□□ -1.78
SHTN1-206ENST00000497044 TLR1Q15399 786 aa3.9□□□□□ -1.78
SHTN1-206ENST00000497044 ZNF697Q5TEC3 545 aa3.9□□□□□ -1.78
SHTN1-206ENST00000497044 FAM177A1Q8N128 213 aaPredicted RBP3.9□□□□□ -1.78
SHTN1-206ENST00000497044 OR13H1Q8NG92 308 aa3.9□□□□□ -1.78
SHTN1-206ENST00000497044 MORF4L1Q9UBU8 362 aa3.9□□□□□ -1.78
SHTN1-206ENST00000497044 RALGAPA2Q2PPJ7 1873 aa3.9□□□□□ -1.78
SHTN1-206ENST00000497044 FAM221AA4D161 298 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 SGPL1O95470 568 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 A1BGP04217 495 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 CSF1RP07333 972 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 TNNI2P48788 182 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 LACTBP83111 547 aaPredicted RBP3.9□□□□□ -1.79
SHTN1-206ENST00000497044 COL9A3Q14050 684 aaPredicted RBP3.9□□□□□ -1.79
SHTN1-206ENST00000497044 GRIK5Q16478 980 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 LBX2Q6XYB7 198 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.9□□□□□ -1.79
SHTN1-206ENST00000497044 EPS8L3Q8TE67 593 aaKnown RBP3.9□□□□□ -1.79
SHTN1-206ENST00000497044 IL17RAQ96F46 866 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 PRRX2Q99811 253 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 NT5C1AQ9BXI3 368 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 BRPF3Q9ULD4 1205 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 USP16Q9Y5T5 823 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 PNMA6FA0A0J9YX94 578 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 CHL1O00533 1208 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 ZBTB24O43167 697 aaPredicted RBP3.9□□□□□ -1.79
SHTN1-206ENST00000497044 TRPA1O75762 1119 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 HOXB4P17483 251 aaPredicted RBP3.9□□□□□ -1.79
SHTN1-206ENST00000497044 TMPOP42166 694 aaKnown RBP3.9□□□□□ -1.79
SHTN1-206ENST00000497044 RPS8P62241 208 aaKnown RBP3.9□□□□□ -1.79
SHTN1-206ENST00000497044 GNAI1P63096 354 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 GPSM2P81274 684 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 TNP2Q05952 138 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 HLFQ16534 295 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 PI16Q6UXB8 463 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 ERO1BQ86YB8 467 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 TTC9Q92623 222 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 AGBL1Q96MI9 1066 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 NIF3L1Q9GZT8 377 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 ACBD3Q9H3P7 528 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 IFT57Q9NWB7 429 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 GGA3Q9NZ52 723 aa3.9□□□□□ -1.79
SHTN1-206ENST00000497044 GJA3Q9Y6H8 435 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms