RNA–Protein interactions for RNA: ENST00000496744.5

ECM1-206, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-206ENST00000496744 STAG1Q8WVM7 1258 aa12.91□□□□□ -0.34
ECM1-206ENST00000496744 KIFC2Q96AC6 838 aa12.91□□□□□ -0.34
ECM1-206ENST00000496744 PAWRQ96IZ0 340 aaKnown RBP12.91□□□□□ -0.34
ECM1-206ENST00000496744 SLC38A10Q9HBR0 1119 aa12.91□□□□□ -0.34
ECM1-206ENST00000496744 STX8Q9UNK0 236 aa12.91□□□□□ -0.34
ECM1-206ENST00000496744 TMEM232C9JQI7 657 aa12.9□□□□□ -0.34
ECM1-206ENST00000496744 PCP11498 1178 aaKnown RBP12.9□□□□□ -0.34
ECM1-206ENST00000496744 FCER1AP12319 257 aa12.9□□□□□ -0.34
ECM1-206ENST00000496744 RRP12Q5JTH9 1297 aaKnown RBP12.9□□□□□ -0.34
ECM1-206ENST00000496744 PPP4R3BQ5MIZ7 849 aa12.9□□□□□ -0.34
ECM1-206ENST00000496744 MFSD14CQ5VZR4 134 aa12.9□□□□□ -0.34
ECM1-206ENST00000496744 ANKLE1Q8NAG6 615 aa12.9□□□□□ -0.34
ECM1-206ENST00000496744 CHMP4CQ96CF2 233 aa12.9□□□□□ -0.34
ECM1-206ENST00000496744 DSCC1Q9BVC3 393 aa12.9□□□□□ -0.34
ECM1-206ENST00000496744 TEX13BQ9BXU2 312 aa12.9□□□□□ -0.34
ECM1-206ENST00000496744 NEDD4P46934 1319 aa12.89□□□□□ -0.35
ECM1-206ENST00000496744 ZNF213O14771 459 aa12.89□□□□□ -0.35
ECM1-206ENST00000496744 PLA2G6O60733 806 aa12.89□□□□□ -0.35
ECM1-206ENST00000496744 ZBED4O75132 1171 aa12.89□□□□□ -0.35
ECM1-206ENST00000496744 PGK2P07205 417 aa12.89□□□□□ -0.35
ECM1-206ENST00000496744 CYBAP13498 195 aa12.89□□□□□ -0.35
ECM1-206ENST00000496744 CHMLP26374 656 aa12.89□□□□□ -0.35
ECM1-206ENST00000496744 SLC1A4P43007 532 aa12.89□□□□□ -0.35
ECM1-206ENST00000496744 ZNF792Q3KQV3 632 aa12.89□□□□□ -0.35
ECM1-206ENST00000496744 SNRNP48Q6IEG0 339 aaKnown RBP12.89□□□□□ -0.35
ECM1-206ENST00000496744 MFSD6Q6ZSS7 791 aa12.89□□□□□ -0.35
ECM1-206ENST00000496744 KCTD1Q719H9 257 aa12.89□□□□□ -0.35
ECM1-206ENST00000496744 MAML3Q96JK9 1138 aa12.89□□□□□ -0.35
ECM1-206ENST00000496744 MMP19Q99542 508 aa12.89□□□□□ -0.35
ECM1-206ENST00000496744 TMEM47Q9BQJ4 181 aa12.89□□□□□ -0.35
ECM1-206ENST00000496744 RAVER2Q9HCJ3 691 aaKnown RBP12.89□□□□□ -0.35
ECM1-206ENST00000496744 TOMM22Q9NS69 142 aa12.89□□□□□ -0.35
ECM1-206ENST00000496744 CEP290O15078 2479 aa12.89□□□□□ -0.35
ECM1-206ENST00000496744 ZNF536O15090 1300 aa12.88□□□□□ -0.35
ECM1-206ENST00000496744 ZNFX1Q9P2E3 1918 aaKnown RBP12.88□□□□□ -0.35
ECM1-206ENST00000496744 DNAJC25-GNG10A0A024R161 153 aa12.88□□□□□ -0.35
ECM1-206ENST00000496744 H0YGN5 161 aa12.88□□□□□ -0.35
ECM1-206ENST00000496744 TOP1P11387 765 aaKnown RBP12.88□□□□□ -0.35
ECM1-206ENST00000496744 COPB2P35606 906 aa12.88□□□□□ -0.35
ECM1-206ENST00000496744 STAT2P52630 851 aa12.88□□□□□ -0.35
ECM1-206ENST00000496744 OAZ1P54368 228 aa12.88□□□□□ -0.35
ECM1-206ENST00000496744 PRAMEF19Q5SWL8 479 aa12.88□□□□□ -0.35
ECM1-206ENST00000496744 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.88□□□□□ -0.35
ECM1-206ENST00000496744 NECAB2Q7Z6G3 386 aa12.88□□□□□ -0.35
ECM1-206ENST00000496744 CPXCR1Q8N123 301 aa12.88□□□□□ -0.35
ECM1-206ENST00000496744 DPF3Q92784 378 aa12.88□□□□□ -0.35
ECM1-206ENST00000496744 DIS3Q9Y2L1 958 aaKnown RBP12.88□□□□□ -0.35
ECM1-206ENST00000496744 FDX1P10109 184 aa12.87□□□□□ -0.35
ECM1-206ENST00000496744 COL6A1P12109 1028 aa12.87□□□□□ -0.35
ECM1-206ENST00000496744 KCTD2Q14681 263 aa12.87□□□□□ -0.35
ECM1-206ENST00000496744 TTBK2Q6IQ55 1244 aa12.87□□□□□ -0.35
ECM1-206ENST00000496744 FAM160B2Q86V87 743 aa12.87□□□□□ -0.35
ECM1-206ENST00000496744 CHURC1Q8WUH1 139 aa12.87□□□□□ -0.35
ECM1-206ENST00000496744 TTC14Q96N46 770 aa12.87□□□□□ -0.35
ECM1-206ENST00000496744 HTATIP2Q9BUP3 242 aa12.87□□□□□ -0.35
ECM1-206ENST00000496744 RNF41Q9H4P4 317 aaPredicted RBP12.87□□□□□ -0.35
ECM1-206ENST00000496744 SLC5A4Q9NY91 659 aa12.87□□□□□ -0.35
ECM1-206ENST00000496744 DDX20Q9UHI6 824 aaKnown RBP12.87□□□□□ -0.35
ECM1-206ENST00000496744 PRR12Q9ULL5 1215 aa12.87□□□□□ -0.35
ECM1-206ENST00000496744 SNHG28P0DPA3 235 aa12.86□□□□□ -0.35
ECM1-206ENST00000496744 SNAP25P60880 206 aa12.86□□□□□ -0.35
ECM1-206ENST00000496744 PTH1RQ03431 593 aa12.86□□□□□ -0.35
ECM1-206ENST00000496744 BTNL9Q6UXG8 535 aa12.86□□□□□ -0.35
ECM1-206ENST00000496744 DCAF4Q8WV16 495 aa12.86□□□□□ -0.35
ECM1-206ENST00000496744 ESR2Q92731 530 aa12.86□□□□□ -0.35
ECM1-206ENST00000496744 FGD4Q96M96 766 aa12.86□□□□□ -0.35
ECM1-206ENST00000496744 AGBL1Q96MI9 1066 aa12.86□□□□□ -0.35
ECM1-206ENST00000496744 ZKSCAN3Q9BRR0 538 aa12.86□□□□□ -0.35
ECM1-206ENST00000496744 TINF2Q9BSI4 451 aa12.86□□□□□ -0.35
ECM1-206ENST00000496744 ZSWIM5Q9P217 1185 aa12.86□□□□□ -0.35
ECM1-206ENST00000496744 CTNNA3Q9UI47 895 aa12.86□□□□□ -0.35
ECM1-206ENST00000496744 PFASO15067 1338 aa12.86□□□□□ -0.35
ECM1-206ENST00000496744 B4E1Z4 1266 aa12.85□□□□□ -0.35
ECM1-206ENST00000496744 SEPT4O43236 478 aa12.85□□□□□ -0.35
ECM1-206ENST00000496744 KDM4AO75164 1064 aa12.85□□□□□ -0.35
ECM1-206ENST00000496744 PDHBP11177 359 aa12.85□□□□□ -0.35
ECM1-206ENST00000496744 TAL1P17542 331 aaPredicted RBP12.85□□□□□ -0.35
ECM1-206ENST00000496744 CNGA1P29973 690 aa12.85□□□□□ -0.35
ECM1-206ENST00000496744 SLC4A3P48751 1232 aa12.85□□□□□ -0.35
ECM1-206ENST00000496744 IMMTQ16891 758 aaKnown RBP12.85□□□□□ -0.35
ECM1-206ENST00000496744 SKAP1Q86WV1 359 aa12.85□□□□□ -0.35
ECM1-206ENST00000496744 DGKHQ86XP1 1220 aa12.85□□□□□ -0.35
ECM1-206ENST00000496744 CHST13Q8NET6 341 aa12.85□□□□□ -0.35
ECM1-206ENST00000496744 ANKS1AQ92625 1134 aa12.85□□□□□ -0.35
ECM1-206ENST00000496744 C11orf49Q9H6J7 331 aa12.85□□□□□ -0.35
ECM1-206ENST00000496744 MTMR7Q9Y216 660 aa12.85□□□□□ -0.35
ECM1-206ENST00000496744 RAD50Q92878 1312 aa12.85□□□□□ -0.35
ECM1-206ENST00000496744 RANBP2P49792 3224 aaKnown RBP12.84□□□□□ -0.35
ECM1-206ENST00000496744 LAMA4Q16363 1823 aa12.84□□□□□ -0.35
ECM1-206ENST00000496744 SGSM2O43147 1006 aa12.84□□□□□ -0.35
ECM1-206ENST00000496744 MSCO60682 206 aa12.84□□□□□ -0.35
ECM1-206ENST00000496744 SNAI1O95863 264 aaPredicted RBP12.84□□□□□ -0.35
ECM1-206ENST00000496744 ZNF865P0CJ78 1059 aaPredicted RBP12.84□□□□□ -0.35
ECM1-206ENST00000496744 SLC16A2P36021 539 aa12.84□□□□□ -0.35
ECM1-206ENST00000496744 NT5C2P49902 561 aa12.84□□□□□ -0.35
ECM1-206ENST00000496744 ZNF543Q08ER8 600 aa12.84□□□□□ -0.35
ECM1-206ENST00000496744 MAMDC4Q6UXC1 1216 aa12.84□□□□□ -0.35
ECM1-206ENST00000496744 DDX11Q96FC9 970 aa12.84□□□□□ -0.35
ECM1-206ENST00000496744 RANBP17Q9H2T7 1088 aaKnown RBP12.84□□□□□ -0.35
ECM1-206ENST00000496744 GPCPD1Q9NPB8 672 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms