RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 TTF2Q9UNY4 1162 aaKnown RBP14.8□□□□□ -0.04
GARNL3-220ENST00000496711 PAXBP1Q9Y5B6 917 aa14.8□□□□□ -0.04
GARNL3-220ENST00000496711 SIPA1L1O43166 1804 aa14.8□□□□□ -0.04
GARNL3-220ENST00000496711 F8W031 263 aaPredicted RBP14.8□□□□□ -0.04
GARNL3-220ENST00000496711 GTPBP6O43824 516 aaPredicted RBP14.8□□□□□ -0.04
GARNL3-220ENST00000496711 CDK11BP21127 795 aaKnown RBP14.8□□□□□ -0.04
GARNL3-220ENST00000496711 CASP1P29466 404 aa14.8□□□□□ -0.04
GARNL3-220ENST00000496711 RBM10P98175 930 aaKnown RBP14.8□□□□□ -0.04
GARNL3-220ENST00000496711 GABPAQ06546 454 aa14.8□□□□□ -0.04
GARNL3-220ENST00000496711 PTPN14Q15678 1187 aa14.8□□□□□ -0.04
GARNL3-220ENST00000496711 INF2Q27J81 1249 aa14.8□□□□□ -0.04
GARNL3-220ENST00000496711 CEP135Q66GS9 1140 aa14.8□□□□□ -0.04
GARNL3-220ENST00000496711 USP17L2Q6R6M4 530 aa14.8□□□□□ -0.04
GARNL3-220ENST00000496711 FLAD1Q8NFF5 587 aa14.8□□□□□ -0.04
GARNL3-220ENST00000496711 MED15Q96RN5 788 aa14.8□□□□□ -0.04
GARNL3-220ENST00000496711 TMX4Q9H1E5 349 aaPredicted RBP14.8□□□□□ -0.04
GARNL3-220ENST00000496711 MYO3BQ8WXR4 1341 aa14.79□□□□□ -0.04
GARNL3-220ENST00000496711 LAD1O00515 517 aa14.79□□□□□ -0.04
GARNL3-220ENST00000496711 CUL4BQ13620 913 aa14.79□□□□□ -0.04
GARNL3-220ENST00000496711 HSP90AA2PQ14568 343 aaPredicted RBP14.79□□□□□ -0.04
GARNL3-220ENST00000496711 HSP90AA4PQ58FG1 418 aa14.79□□□□□ -0.04
GARNL3-220ENST00000496711 KRT25Q7Z3Z0 450 aa14.79□□□□□ -0.04
GARNL3-220ENST00000496711 MASTLQ96GX5 879 aa14.79□□□□□ -0.04
GARNL3-220ENST00000496711 CPVLQ9H3G5 476 aa14.79□□□□□ -0.04
GARNL3-220ENST00000496711 PARP3Q9Y6F1 533 aa14.79□□□□□ -0.04
GARNL3-220ENST00000496711 PSDA5PKW4 1024 aaPredicted RBP14.78□□□□□ -0.04
GARNL3-220ENST00000496711 hCG_1984214I3L0E3 225 aa14.78□□□□□ -0.04
GARNL3-220ENST00000496711 KIF2AO00139 706 aaPredicted RBP14.78□□□□□ -0.04
GARNL3-220ENST00000496711 MMP10P09238 476 aa14.78□□□□□ -0.04
GARNL3-220ENST00000496711 CD44P16070 742 aaKnown RBP14.78□□□□□ -0.04
GARNL3-220ENST00000496711 GNA11P29992 359 aa14.78□□□□□ -0.04
GARNL3-220ENST00000496711 SPATA1Q5VX52 437 aa14.78□□□□□ -0.04
GARNL3-220ENST00000496711 E4F1Q66K89 784 aaPredicted RBP14.78□□□□□ -0.04
GARNL3-220ENST00000496711 DTHD1Q6ZMT9 781 aa14.78□□□□□ -0.04
GARNL3-220ENST00000496711 HOMER1Q86YM7 354 aa14.78□□□□□ -0.04
GARNL3-220ENST00000496711 ZNF713Q8N859 430 aaPredicted RBP14.78□□□□□ -0.04
GARNL3-220ENST00000496711 C6orf50Q9HD87 102 aa14.78□□□□□ -0.04
GARNL3-220ENST00000496711 DDX4Q9NQI0 724 aaKnown RBP14.78□□□□□ -0.04
GARNL3-220ENST00000496711 TRMT1Q9NXH9 659 aaKnown RBP14.78□□□□□ -0.04
GARNL3-220ENST00000496711 MTMR4Q9NYA4 1195 aa14.78□□□□□ -0.04
GARNL3-220ENST00000496711 SWAP70Q9UH65 585 aa14.78□□□□□ -0.04
GARNL3-220ENST00000496711 SCN9AQ15858 1988 aa14.78□□□□□ -0.04
GARNL3-220ENST00000496711 APBA3O96018 575 aa14.78□□□□□ -0.04
GARNL3-220ENST00000496711 PDHBP11177 359 aa14.78□□□□□ -0.04
GARNL3-220ENST00000496711 PRPHP41219 470 aa14.78□□□□□ -0.04
GARNL3-220ENST00000496711 STAT6P42226 847 aa14.78□□□□□ -0.04
GARNL3-220ENST00000496711 DOK7Q18PE1 504 aa14.78□□□□□ -0.04
GARNL3-220ENST00000496711 SOGA3Q5TF21 947 aa14.78□□□□□ -0.04
GARNL3-220ENST00000496711 STAMQ92783 540 aa14.78□□□□□ -0.04
GARNL3-220ENST00000496711 DISC1Q9NRI5 854 aa14.78□□□□□ -0.04
GARNL3-220ENST00000496711 SAMSN1Q9NSI8 373 aaKnown RBP14.78□□□□□ -0.04
GARNL3-220ENST00000496711 ARFGEF1Q9Y6D6 1849 aa14.77□□□□□ -0.04
GARNL3-220ENST00000496711 SLX4Q8IY92 1834 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 IGKV6D-41A0A0C4DH26 115 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 ESYT2A0FGR8 921 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 SMCO2A6NFE2 343 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 USP17L5A8MUK1 530 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 PPP1R3GB7ZBB8 358 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 G3V3G9 751 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 AKR1B1P15121 316 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 NONOQ15233 471 aaKnown RBP eCLIP14.77□□□□□ -0.05
GARNL3-220ENST00000496711 ASPRV1Q53RT3 343 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 DCAF8Q5TAQ9 597 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 KLHL10Q6JEL2 608 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 HHIPL2Q6UWX4 724 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 TEKT1Q969V4 418 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 PIGSQ96S52 555 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 MAP7D2Q96T17 732 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 MXD3Q9BW11 206 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 BLZF1Q9H2G9 400 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 TMEM60Q9H2L4 133 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 RIOX1Q9H6W3 641 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 USP40Q9NVE5 1235 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 RMND1Q9NWS8 449 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 SERPINB13Q9UIV8 391 aa14.77□□□□□ -0.05
GARNL3-220ENST00000496711 CCP110O43303 1012 aa14.76□□□□□ -0.05
GARNL3-220ENST00000496711 SCNN1DP51172 638 aa14.76□□□□□ -0.05
GARNL3-220ENST00000496711 TBX2Q13207 712 aaPredicted RBP14.76□□□□□ -0.05
GARNL3-220ENST00000496711 KARSQ15046 597 aaKnown RBP14.76□□□□□ -0.05
GARNL3-220ENST00000496711 SPECC1LQ69YQ0 1117 aa14.76□□□□□ -0.05
GARNL3-220ENST00000496711 MTERF4Q7Z6M4 381 aaKnown RBP14.76□□□□□ -0.05
GARNL3-220ENST00000496711 SMYD4Q8IYR2 804 aaPredicted RBP14.76□□□□□ -0.05
GARNL3-220ENST00000496711 LRRC47Q8N1G4 583 aaKnown RBP14.76□□□□□ -0.05
GARNL3-220ENST00000496711 PPP1R13BQ96KQ4 1090 aa14.76□□□□□ -0.05
GARNL3-220ENST00000496711 MTRQ99707 1265 aa14.76□□□□□ -0.05
GARNL3-220ENST00000496711 TMX1Q9H3N1 280 aa14.76□□□□□ -0.05
GARNL3-220ENST00000496711 A0A1B0GTH6 734 aa14.76□□□□□ -0.05
GARNL3-220ENST00000496711 CTIFO43310 598 aaKnown RBP14.76□□□□□ -0.05
GARNL3-220ENST00000496711 HLA-DOAP06340 250 aa14.76□□□□□ -0.05
GARNL3-220ENST00000496711 SNHG28P0DPA3 235 aa14.76□□□□□ -0.05
GARNL3-220ENST00000496711 CDKAL1Q5VV42 579 aa14.76□□□□□ -0.05
GARNL3-220ENST00000496711 CDC42EP5Q6NZY7 148 aa14.76□□□□□ -0.05
GARNL3-220ENST00000496711 RASSF8Q8NHQ8 419 aa14.76□□□□□ -0.05
GARNL3-220ENST00000496711 ZNF592Q92610 1267 aa14.76□□□□□ -0.05
GARNL3-220ENST00000496711 CTNND2Q9UQB3 1225 aa14.76□□□□□ -0.05
GARNL3-220ENST00000496711 FRMPD2Q68DX3 1309 aaPredicted RBP14.76□□□□□ -0.05
GARNL3-220ENST00000496711 TTLL1O95922 423 aa14.75□□□□□ -0.05
GARNL3-220ENST00000496711 OR52Z1P0C646 297 aa14.75□□□□□ -0.05
GARNL3-220ENST00000496711 CDC25AP30304 524 aa14.75□□□□□ -0.05
GARNL3-220ENST00000496711 STX17P56962 302 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms