RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 FXR1P51114 621 aaKnown RBP eCLIP7.11□□□□□ -1.27
SSBP1-213ENST00000496622 ANKRD1Q15327 319 aa7.11□□□□□ -1.27
SSBP1-213ENST00000496622 CRY2Q49AN0 593 aa7.11□□□□□ -1.27
SSBP1-213ENST00000496622 CLEC17AQ6ZS10 378 aa7.11□□□□□ -1.27
SSBP1-213ENST00000496622 MTMR14Q8NCE2 650 aa7.11□□□□□ -1.27
SSBP1-213ENST00000496622 NSUN7Q8NE18 718 aaKnown RBP7.11□□□□□ -1.27
SSBP1-213ENST00000496622 IRX2Q9BZI1 471 aaPredicted RBP7.11□□□□□ -1.27
SSBP1-213ENST00000496622 PNPLA7Q6ZV29 1317 aa7.1□□□□□ -1.27
SSBP1-213ENST00000496622 MYH3P11055 1940 aa7.1□□□□□ -1.27
SSBP1-213ENST00000496622 CCDC66A2RUB6 948 aa7.1□□□□□ -1.27
SSBP1-213ENST00000496622 GOLGA8BA8MQT2 603 aa7.1□□□□□ -1.27
SSBP1-213ENST00000496622 FDPSP14324 419 aaKnown RBP7.1□□□□□ -1.27
SSBP1-213ENST00000496622 NAT1P18440 290 aa7.1□□□□□ -1.27
SSBP1-213ENST00000496622 NOP2P46087 812 aaKnown RBP7.1□□□□□ -1.27
SSBP1-213ENST00000496622 TRDNQ13061 729 aa7.1□□□□□ -1.27
SSBP1-213ENST00000496622 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.1□□□□□ -1.27
SSBP1-213ENST00000496622 ZNF511Q8NB15 262 aa7.1□□□□□ -1.27
SSBP1-213ENST00000496622 CXorf38Q8TB03 319 aa7.1□□□□□ -1.27
SSBP1-213ENST00000496622 FEZ2Q9UHY8 353 aaPredicted RBP7.1□□□□□ -1.27
SSBP1-213ENST00000496622 ANAPC4Q9UJX5 808 aa7.1□□□□□ -1.27
SSBP1-213ENST00000496622 KIF3AQ9Y496 699 aa7.1□□□□□ -1.27
SSBP1-213ENST00000496622 hCG_1642624A0A1W2PR95 340 aa7.1□□□□□ -1.27
SSBP1-213ENST00000496622 J3QL48 77 aa7.1□□□□□ -1.27
SSBP1-213ENST00000496622 KIF1CO43896 1103 aaKnown RBP7.1□□□□□ -1.27
SSBP1-213ENST00000496622 CDC27P30260 824 aa7.1□□□□□ -1.27
SSBP1-213ENST00000496622 FAM184AQ8NB25 1140 aa7.1□□□□□ -1.27
SSBP1-213ENST00000496622 ANKRD2Q9GZV1 360 aa7.1□□□□□ -1.27
SSBP1-213ENST00000496622 SPEF2Q9C093 1822 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 SYCE3A1L190 88 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 PFKFB2O60825 505 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 POLR3DP05423 398 aaPredicted RBP7.09□□□□□ -1.27
SSBP1-213ENST00000496622 SRGNP10124 158 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 KLHL40Q2TBA0 621 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 FAM47AQ5JRC9 791 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 MFSD6Q6ZSS7 791 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 TBC1D16Q8TBP0 767 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 IGDCC4Q8TDY8 1250 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 AGXT2Q9BYV1 514 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 MAF1Q9H063 256 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 CD209Q9NNX6 404 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 SUFUQ9UMX1 484 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 FRMD4BQ9Y2L6 1034 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 TNRC6CQ9HCJ0 1690 aaKnown RBP7.09□□□□□ -1.27
SSBP1-213ENST00000496622 XDHP47989 1333 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 IRS2Q9Y4H2 1338 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 H3BQV1 296 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 IFIT3O14879 490 aaKnown RBP7.09□□□□□ -1.27
SSBP1-213ENST00000496622 PPP1R12AO14974 1030 aaPredicted RBP7.09□□□□□ -1.27
SSBP1-213ENST00000496622 RANBP6O60518 1105 aaKnown RBP7.09□□□□□ -1.27
SSBP1-213ENST00000496622 IPO7O95373 1038 aaKnown RBP7.09□□□□□ -1.27
SSBP1-213ENST00000496622 GTF2IP78347 998 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 PPARAQ07869 468 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 AGERQ15109 404 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 ZSCAN23Q3MJ62 389 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 AKNAD1Q5T1N1 836 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 NFXL1Q6ZNB6 911 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 DZIP1Q86YF9 867 aaKnown RBP7.09□□□□□ -1.27
SSBP1-213ENST00000496622 NLGN1Q8N2Q7 840 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 SLC44A5Q8NCS7 719 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 DYNLL2Q96FJ2 89 aa7.09□□□□□ -1.27
SSBP1-213ENST00000496622 R3HCC1Q9Y3T6 440 aaKnown RBP7.09□□□□□ -1.27
SSBP1-213ENST00000496622 CTAGE5O15320 804 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 GPR37L1O60883 481 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 TMEM67Q5HYA8 995 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 MFSD14BQ5SR56 506 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 CTR9Q6PD62 1173 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 TTC6Q86TZ1 520 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 RNF214Q8ND24 703 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 EHBP1Q8NDI1 1231 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 NUP133Q8WUM0 1156 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 PIBF1Q8WXW3 757 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 DBNDD1Q9H9R9 158 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 SAP30BPQ9UHR5 308 aaKnown RBP7.08□□□□□ -1.28
SSBP1-213ENST00000496622 GGA1Q9UJY5 639 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 ANGEL1Q9UNK9 670 aaKnown RBP7.08□□□□□ -1.28
SSBP1-213ENST00000496622 PCDHAC2Q9Y5I4 1007 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 CPLX1O14810 134 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 TPM3P06753 285 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 LDHBP07195 334 aaKnown RBP7.08□□□□□ -1.28
SSBP1-213ENST00000496622 GUCY1A2P33402 732 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 NAP1L1P55209 391 aaKnown RBP7.08□□□□□ -1.28
SSBP1-213ENST00000496622 APOA5Q6Q788 366 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 TDRD7Q8NHU6 1098 aaKnown RBP7.08□□□□□ -1.28
SSBP1-213ENST00000496622 SH3RF3Q8TEJ3 882 aaPredicted RBP7.08□□□□□ -1.28
SSBP1-213ENST00000496622 TGFBRAP1Q8WUH2 860 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 RBM17Q96I25 401 aaKnown RBP7.08□□□□□ -1.28
SSBP1-213ENST00000496622 OCSTAMPQ9BR26 566 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 NACAP1Q9BZK3 213 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 ALDH8A1Q9H2A2 487 aaPredicted RBP7.08□□□□□ -1.28
SSBP1-213ENST00000496622 TMX1Q9H3N1 280 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 SUDS3Q9H7L9 328 aaPredicted RBP7.08□□□□□ -1.28
SSBP1-213ENST00000496622 DCP1AQ9NPI6 582 aaPredicted RBP7.08□□□□□ -1.28
SSBP1-213ENST00000496622 MCM9Q9NXL9 1143 aa7.08□□□□□ -1.28
SSBP1-213ENST00000496622 PES1O00541 588 aaKnown RBP7.07□□□□□ -1.28
SSBP1-213ENST00000496622 SKILP12757 684 aa7.07□□□□□ -1.28
SSBP1-213ENST00000496622 RPIAP49247 311 aa7.07□□□□□ -1.28
SSBP1-213ENST00000496622 SCNN1DP51172 638 aa7.07□□□□□ -1.28
SSBP1-213ENST00000496622 PLCD1P51178 756 aa7.07□□□□□ -1.28
SSBP1-213ENST00000496622 ICE2Q659A1 982 aa7.07□□□□□ -1.28
SSBP1-213ENST00000496622 Q6ZNB5 142 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 267.9 ms