RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 RASGRP2Q7LDG7 609 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 TRMT44Q8IYL2 757 aaKnown RBP9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 GFM2Q969S9 779 aaKnown RBP9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 SH3GL2Q99962 352 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 TRAIPQ9BWF2 469 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 CARD9Q9H257 536 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 TAF1DQ9H5J8 278 aaPredicted RBP9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 C9orf78Q9NZ63 289 aaPredicted RBP9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 KLHL14Q9P2G3 628 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 HDAC6Q9UBN7 1215 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 TSKSQ9UJT2 592 aa9.03□□□□□ -0.96
CRNKL1-205ENST00000496549 ANO9A1A5B4 782 aa9.02□□□□□ -0.96
CRNKL1-205ENST00000496549 ALDH1L1O75891 902 aa9.02□□□□□ -0.96
CRNKL1-205ENST00000496549 KRT14P02533 472 aa9.02□□□□□ -0.96
CRNKL1-205ENST00000496549 STX17P56962 302 aa9.02□□□□□ -0.96
CRNKL1-205ENST00000496549 PPP2R2AP63151 447 aa9.02□□□□□ -0.96
CRNKL1-205ENST00000496549 GUCY2DQ02846 1103 aa9.02□□□□□ -0.96
CRNKL1-205ENST00000496549 ZC3H18Q86VM9 953 aaKnown RBP9.02□□□□□ -0.96
CRNKL1-205ENST00000496549 MMS19Q96T76 1030 aa9.02□□□□□ -0.96
CRNKL1-205ENST00000496549 DDX21Q9NR30 783 aaKnown RBP eCLIP9.02□□□□□ -0.96
CRNKL1-205ENST00000496549 CCDC87Q9NVE4 849 aa9.02□□□□□ -0.96
CRNKL1-205ENST00000496549 M0R2C6 588 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 MFAP3LO75121 409 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 CCT6AP40227 531 aaKnown RBP9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 UBXN1Q04323 297 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 RIPK1Q13546 671 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 ST13P4Q8IZP2 240 aaPredicted RBP9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 ATP11CQ8NB49 1132 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 CLMNQ96JQ2 1002 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 ZIM3Q96PE6 472 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.02□□□□□ -0.974e-9■■■■□ 25.9
CRNKL1-205ENST00000496549 NUP58Q9BVL2 599 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 PDP2Q9P2J9 529 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 PIK3R4Q99570 1358 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 OPLAHO14841 1288 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 MGRN1O60291 552 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 OPHN1O60890 802 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 CD151P48509 253 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 ZNF131P52739 623 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 WASHC4Q2M389 1173 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 TTC39AQ5SRH9 613 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 NUGGCQ68CJ6 796 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 UNC5CLQ8IV45 518 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 DNAJC9Q8WXX5 260 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 ARHGEF2Q92974 986 aaKnown RBP9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 TXLNGQ9NUQ3 528 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 SYNRGQ9UMZ2 1314 aa9.02□□□□□ -0.97
CRNKL1-205ENST00000496549 GPATCH8Q9UKJ3 1502 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 ADGRL3Q9HAR2 1447 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 HEXIM1O94992 359 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 DDX46Q7L014 1031 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 TAOK1Q7L7X3 1001 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 NBPF15Q8N660 670 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 ACSBG1Q96GR2 724 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 RANBP17Q9H2T7 1088 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 ECT2Q9H8V3 914 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 ZWILCHQ9H900 591 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 EBF2Q9HAK2 575 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 EPB41L5Q9HCM4 733 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 POLD4Q9HCU8 107 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 KCNH3Q9ULD8 1083 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 CHMP2BQ9UQN3 213 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 PLAAQ9Y263 795 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 PCDHGA4Q9Y5G9 962 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 BZW2Q9Y6E2 419 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 NEO1Q92859 1461 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 KCNA3P22001 575 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 SLC7A5Q01650 507 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 UBE3BQ7Z3V4 1068 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 ENOX1Q8TC92 643 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 AGAP11Q8TF27 550 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 NECTIN2Q92692 538 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 ZCWPW1Q9H0M4 648 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 INTS9Q9NV88 658 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 NOVA2Q9UNW9 492 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 ZNF148Q9UQR1 794 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 ZNF518AQ6AHZ1 1483 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 ZSCAN9O15535 394 aaPredicted RBP9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 SRGAP2O75044 1071 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 SUPT3HO75486 399 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 NPTXRO95502 500 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 NQO1P15559 274 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 TLDC1Q6P9B6 456 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 SESTD1Q86VW0 696 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 KIFAP3Q92845 792 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 NDNQ99608 321 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 ELAC2Q9BQ52 826 aaKnown RBP9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 KRT23Q9C075 422 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 FAM192AQ9GZU8 254 aa9.01□□□□□ -0.97
CRNKL1-205ENST00000496549 HGSO14964 777 aaPredicted RBP9□□□□□ -0.97
CRNKL1-205ENST00000496549 TRIML1Q8N9V2 468 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 USP6NLQ92738 828 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 TEKT1Q969V4 418 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 NR1H4Q96RI1 486 aaPredicted RBP9□□□□□ -0.97
CRNKL1-205ENST00000496549 LRRC2Q9BYS8 371 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 RAB17Q9H0T7 212 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 SPATA7Q9P0W8 599 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 A0A0G2JS52 829 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 DYTNA2CJ06 578 aa9□□□□□ -0.97
CRNKL1-205ENST00000496549 NDUFA10O95299 355 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms