RNA–Protein interactions for RNA: ENST00000496197.5

PTPN7-218, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,463 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-218ENST00000496197 CALM3P0DP25 149 aa15.72■□□□□ 0.11
PTPN7-218ENST00000496197 STAT2P52630 851 aa15.72■□□□□ 0.11
PTPN7-218ENST00000496197 FUT2Q10981 343 aa15.72■□□□□ 0.11
PTPN7-218ENST00000496197 SREBF2Q12772 1141 aa15.72■□□□□ 0.11
PTPN7-218ENST00000496197 NTRK3Q16288 839 aa15.72■□□□□ 0.11
PTPN7-218ENST00000496197 RTN1Q16799 776 aa15.72■□□□□ 0.11
PTPN7-218ENST00000496197 GPATCH4Q5T3I0 446 aaKnown RBP15.72■□□□□ 0.11
PTPN7-218ENST00000496197 BTNL9Q6UXG8 535 aa15.72■□□□□ 0.11
PTPN7-218ENST00000496197 SYNE3Q6ZMZ3 975 aa15.72■□□□□ 0.11
PTPN7-218ENST00000496197 TMTC3Q6ZXV5 915 aa15.72■□□□□ 0.11
PTPN7-218ENST00000496197 CTCFLQ8NI51 663 aaPredicted RBP15.72■□□□□ 0.11
PTPN7-218ENST00000496197 ATG4CQ96DT6 458 aa15.72■□□□□ 0.11
PTPN7-218ENST00000496197 PRR12Q9ULL5 1215 aa15.72■□□□□ 0.11
PTPN7-218ENST00000496197 CNTNAP5Q8WYK1 1306 aa15.72■□□□□ 0.11
PTPN7-218ENST00000496197 CTDNEP1O95476 244 aa15.71■□□□□ 0.11
PTPN7-218ENST00000496197 TAL1P17542 331 aaPredicted RBP15.71■□□□□ 0.11
PTPN7-218ENST00000496197 DSG3P32926 999 aa15.71■□□□□ 0.11
PTPN7-218ENST00000496197 MAP2K2P36507 400 aa15.71■□□□□ 0.11
PTPN7-218ENST00000496197 RCAN1P53805 252 aa15.71■□□□□ 0.11
PTPN7-218ENST00000496197 INHBEP58166 350 aa15.71■□□□□ 0.11
PTPN7-218ENST00000496197 CCDC82Q8N4S0 544 aa15.71■□□□□ 0.11
PTPN7-218ENST00000496197 GTF3C6Q969F1 213 aa15.71■□□□□ 0.11
PTPN7-218ENST00000496197 KIFC2Q96AC6 838 aa15.71■□□□□ 0.11
PTPN7-218ENST00000496197 SLF1Q9BQI6 1058 aa15.71■□□□□ 0.11
PTPN7-218ENST00000496197 R3HDMLQ9H3Y0 253 aa15.71■□□□□ 0.11
PTPN7-218ENST00000496197 FEM1BQ9UK73 627 aa15.71■□□□□ 0.11
PTPN7-218ENST00000496197 PPP1R9AQ9ULJ8 1098 aa15.71■□□□□ 0.11
PTPN7-218ENST00000496197 SLC45A1Q9Y2W3 748 aa15.71■□□□□ 0.11
PTPN7-218ENST00000496197 ADGRA2Q96PE1 1338 aa15.71■□□□□ 0.11
PTPN7-218ENST00000496197 hCG_1642624A0A1W2PR95 340 aa15.71■□□□□ 0.1
PTPN7-218ENST00000496197 PLA2G6O60733 806 aa15.71■□□□□ 0.1
PTPN7-218ENST00000496197 HERVK_113P62684 666 aa15.71■□□□□ 0.1
PTPN7-218ENST00000496197 IKQ13123 557 aaPredicted RBP15.71■□□□□ 0.1
PTPN7-218ENST00000496197 COG2Q14746 738 aa15.71■□□□□ 0.1
PTPN7-218ENST00000496197 SYDE2Q5VT97 1194 aa15.71■□□□□ 0.1
PTPN7-218ENST00000496197 ADGRF4Q8IZF3 695 aa15.71■□□□□ 0.1
PTPN7-218ENST00000496197 REPS2Q8NFH8 660 aa15.71■□□□□ 0.1
PTPN7-218ENST00000496197 TMX3Q96JJ7 454 aa15.71■□□□□ 0.1
PTPN7-218ENST00000496197 SLKQ9H2G2 1235 aaPredicted RBP15.71■□□□□ 0.1
PTPN7-218ENST00000496197 JMJD4Q9H9V9 463 aa15.71■□□□□ 0.1
PTPN7-218ENST00000496197 TXNRD2Q9NNW7 524 aa15.71■□□□□ 0.1
PTPN7-218ENST00000496197 ADAMTS5Q9UNA0 930 aa15.71■□□□□ 0.1
PTPN7-218ENST00000496197 CNMDO75829 334 aa15.7■□□□□ 0.1
PTPN7-218ENST00000496197 KIF5BP33176 963 aa15.7■□□□□ 0.1
PTPN7-218ENST00000496197 IRX3P78415 501 aaPredicted RBP15.7■□□□□ 0.1
PTPN7-218ENST00000496197 CCDC83Q8IWF9 413 aa15.7■□□□□ 0.1
PTPN7-218ENST00000496197 PIBF1Q8WXW3 757 aa15.7■□□□□ 0.1
PTPN7-218ENST00000496197 PHKBQ93100 1093 aa15.7■□□□□ 0.1
PTPN7-218ENST00000496197 SNX21Q969T3 373 aa15.7■□□□□ 0.1
PTPN7-218ENST00000496197 RIOX1Q9H6W3 641 aa15.7■□□□□ 0.1
PTPN7-218ENST00000496197 VAT1LQ9HCJ6 419 aa15.7■□□□□ 0.1
PTPN7-218ENST00000496197 RBM28Q9NW13 759 aaKnown RBP15.7■□□□□ 0.1
PTPN7-218ENST00000496197 BTBD7Q9P203 1132 aa15.7■□□□□ 0.1
PTPN7-218ENST00000496197 MGAMO43451 1857 aa15.69■□□□□ 0.1
PTPN7-218ENST00000496197 RBBP6Q7Z6E9 1792 aaKnown RBP15.69■□□□□ 0.1
PTPN7-218ENST00000496197 VWA5AO00534 786 aa15.69■□□□□ 0.1
PTPN7-218ENST00000496197 OSBPP22059 807 aa15.69■□□□□ 0.1
PTPN7-218ENST00000496197 CRHR2Q13324 411 aa15.69■□□□□ 0.1
PTPN7-218ENST00000496197 TAF1CQ15572 869 aaPredicted RBP15.69■□□□□ 0.1
PTPN7-218ENST00000496197 FAM160B2Q86V87 743 aa15.69■□□□□ 0.1
PTPN7-218ENST00000496197 PRPF38AQ8NAV1 312 aaKnown RBP15.69■□□□□ 0.1
PTPN7-218ENST00000496197 MTMR8Q96EF0 704 aa15.69■□□□□ 0.1
PTPN7-218ENST00000496197 ZNF536O15090 1300 aa15.69■□□□□ 0.1
PTPN7-218ENST00000496197 PPP1R11O60927 126 aaPredicted RBP15.68■□□□□ 0.1
PTPN7-218ENST00000496197 PABPC4Q13310 644 aaKnown RBP eCLIP15.68■□□□□ 0.1
PTPN7-218ENST00000496197 LBX2Q6XYB7 198 aa15.68■□□□□ 0.1
PTPN7-218ENST00000496197 CHURC1Q8WUH1 139 aa15.68■□□□□ 0.1
PTPN7-218ENST00000496197 ZSCAN31Q96LW9 406 aaPredicted RBP15.68■□□□□ 0.1
PTPN7-218ENST00000496197 PIGSQ96S52 555 aa15.68■□□□□ 0.1
PTPN7-218ENST00000496197 SPZ1Q9BXG8 430 aa15.68■□□□□ 0.1
PTPN7-218ENST00000496197 RANBP17Q9H2T7 1088 aaKnown RBP15.68■□□□□ 0.1
PTPN7-218ENST00000496197 SLC38A10Q9HBR0 1119 aa15.68■□□□□ 0.1
PTPN7-218ENST00000496197 ZCCHC17Q9NP64 241 aaKnown RBP15.68■□□□□ 0.1
PTPN7-218ENST00000496197 RNF186Q9NXI6 227 aa15.68■□□□□ 0.1
PTPN7-218ENST00000496197 RBPJLQ9UBG7 517 aa15.68■□□□□ 0.1
PTPN7-218ENST00000496197 MYPNQ86TC9 1320 aa15.68■□□□□ 0.1
PTPN7-218ENST00000496197 K7ELQ4 463 aaPredicted RBP15.67■□□□□ 0.1
PTPN7-218ENST00000496197 JAK2O60674 1132 aa15.67■□□□□ 0.1
PTPN7-218ENST00000496197 MCM2P49736 904 aa15.67■□□□□ 0.1
PTPN7-218ENST00000496197 TMEM132BQ14DG7 1078 aa15.67■□□□□ 0.1
PTPN7-218ENST00000496197 CDC37Q16543 378 aaPredicted RBP15.67■□□□□ 0.1
PTPN7-218ENST00000496197 QRICH1Q2TAL8 776 aa15.67■□□□□ 0.1
PTPN7-218ENST00000496197 Q3C1V9 767 aa15.67■□□□□ 0.1
PTPN7-218ENST00000496197 HOMER1Q86YM7 354 aa15.67■□□□□ 0.1
PTPN7-218ENST00000496197 NSUN7Q8NE18 718 aaKnown RBP15.67■□□□□ 0.1
PTPN7-218ENST00000496197 IL27Q8NEV9 243 aa15.67■□□□□ 0.1
PTPN7-218ENST00000496197 PARK7Q99497 189 aaKnown RBP15.67■□□□□ 0.1
PTPN7-218ENST00000496197 SH2B1Q9NRF2 756 aaPredicted RBP15.67■□□□□ 0.1
PTPN7-218ENST00000496197 CPA4Q9UI42 421 aa15.67■□□□□ 0.1
PTPN7-218ENST00000496197 PNMA3Q9UL41 463 aa15.67■□□□□ 0.1
PTPN7-218ENST00000496197 ZNF214Q9UL59 606 aaPredicted RBP15.67■□□□□ 0.1
PTPN7-218ENST00000496197 PLXNB2O15031 1838 aa15.67■□□□□ 0.1
PTPN7-218ENST00000496197 LCTP09848 1927 aa15.67■□□□□ 0.1
PTPN7-218ENST00000496197 DHX16O60231 1041 aaKnown RBP15.66■□□□□ 0.1
PTPN7-218ENST00000496197 TRPA1O75762 1119 aa15.66■□□□□ 0.1
PTPN7-218ENST00000496197 TBC1D8O95759 1140 aa15.66■□□□□ 0.1
PTPN7-218ENST00000496197 IFNAR1P17181 557 aa15.66■□□□□ 0.1
PTPN7-218ENST00000496197 GNAQP50148 359 aa15.66■□□□□ 0.1
PTPN7-218ENST00000496197 CCDC174Q6PII3 467 aa15.66■□□□□ 0.1
PTPN7-218ENST00000496197 ANKRD13CQ8N6S4 541 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms