RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 BTBD19C9JJ37 291 aa22.63■■□□□ 1.21
ATG3-208ENST00000495756 FLOT1O75955 427 aa22.63■■□□□ 1.21
ATG3-208ENST00000495756 SMARCA1P28370 1054 aa22.63■■□□□ 1.21
ATG3-208ENST00000495756 INHBEP58166 350 aa22.63■■□□□ 1.21
ATG3-208ENST00000495756 PABPC4Q13310 644 aaKnown RBP eCLIP22.63■■□□□ 1.21
ATG3-208ENST00000495756 CUL4AQ13619 759 aa22.63■■□□□ 1.21
ATG3-208ENST00000495756 SLC35G1Q2M3R5 365 aa22.63■■□□□ 1.21
ATG3-208ENST00000495756 CPLX2Q6PUV4 134 aaKnown RBP22.63■■□□□ 1.21
ATG3-208ENST00000495756 ANKRD23Q86SG2 305 aa22.63■■□□□ 1.21
ATG3-208ENST00000495756 FAM160B2Q86V87 743 aa22.63■■□□□ 1.21
ATG3-208ENST00000495756 CCDC82Q8N4S0 544 aa22.63■■□□□ 1.21
ATG3-208ENST00000495756 SLF1Q9BQI6 1058 aa22.63■■□□□ 1.21
ATG3-208ENST00000495756 SPZ1Q9BXG8 430 aa22.63■■□□□ 1.21
ATG3-208ENST00000495756 CYTH3O43739 400 aa22.62■■□□□ 1.21
ATG3-208ENST00000495756 CTDNEP1O95476 244 aa22.62■■□□□ 1.21
ATG3-208ENST00000495756 IFNAR1P17181 557 aa22.62■■□□□ 1.21
ATG3-208ENST00000495756 KIF23Q02241 960 aaPredicted RBP22.62■■□□□ 1.21
ATG3-208ENST00000495756 SYDE2Q5VT97 1194 aa22.62■■□□□ 1.21
ATG3-208ENST00000495756 ZIC5Q96T25 663 aa22.62■■□□□ 1.21
ATG3-208ENST00000495756 SLC45A1Q9Y2W3 748 aa22.62■■□□□ 1.21
ATG3-208ENST00000495756 PARP14Q460N5 1801 aa22.62■■□□□ 1.21
ATG3-208ENST00000495756 BAZ2BQ9UIF8 2168 aaKnown RBP22.62■■□□□ 1.21
ATG3-208ENST00000495756 RLFQ13129 1914 aa22.61■■□□□ 1.21
ATG3-208ENST00000495756 CDKL5O76039 1030 aa22.61■■□□□ 1.21
ATG3-208ENST00000495756 SREBF2Q12772 1141 aa22.61■■□□□ 1.21
ATG3-208ENST00000495756 COG2Q14746 738 aa22.61■■□□□ 1.21
ATG3-208ENST00000495756 ADGRF4Q8IZF3 695 aa22.61■■□□□ 1.21
ATG3-208ENST00000495756 FAM43AQ8N2R8 423 aa22.61■■□□□ 1.21
ATG3-208ENST00000495756 PRPF38AQ8NAV1 312 aaKnown RBP22.61■■□□□ 1.21
ATG3-208ENST00000495756 KIFC2Q96AC6 838 aa22.61■■□□□ 1.21
ATG3-208ENST00000495756 RIOX1Q9H6W3 641 aa22.61■■□□□ 1.21
ATG3-208ENST00000495756 PPP1R9AQ9ULJ8 1098 aa22.61■■□□□ 1.21
ATG3-208ENST00000495756 PRR12Q9ULL5 1215 aa22.61■■□□□ 1.21
ATG3-208ENST00000495756 CNTNAP5Q8WYK1 1306 aa22.61■■□□□ 1.21
ATG3-208ENST00000495756 WDR33Q9C0J8 1336 aaKnown RBP22.61■■□□□ 1.21
ATG3-208ENST00000495756 PDHXO00330 501 aa22.6■■□□□ 1.21
ATG3-208ENST00000495756 AOC2O75106 756 aa22.6■■□□□ 1.21
ATG3-208ENST00000495756 PHKBQ93100 1093 aa22.6■■□□□ 1.21
ATG3-208ENST00000495756 LLPHQ9BRT6 129 aaKnown RBP22.6■■□□□ 1.21
ATG3-208ENST00000495756 ASCC2Q9H1I8 757 aaPredicted RBP22.6■■□□□ 1.21
ATG3-208ENST00000495756 JMJD4Q9H9V9 463 aa22.6■■□□□ 1.21
ATG3-208ENST00000495756 IGF2BP3O00425 579 aaKnown RBP eCLIP22.6■■□□□ 1.21
ATG3-208ENST00000495756 TM4SF4P48230 202 aa22.6■■□□□ 1.21
ATG3-208ENST00000495756 VEGFBP49765 207 aa22.6■■□□□ 1.21
ATG3-208ENST00000495756 IRX3P78415 501 aaPredicted RBP22.6■■□□□ 1.21
ATG3-208ENST00000495756 SAMD1Q6SPF0 538 aaPredicted RBP22.6■■□□□ 1.21
ATG3-208ENST00000495756 NSUN7Q8NE18 718 aaKnown RBP22.6■■□□□ 1.21
ATG3-208ENST00000495756 VAT1LQ9HCJ6 419 aa22.6■■□□□ 1.21
ATG3-208ENST00000495756 HOXC10Q9NYD6 342 aa22.6■■□□□ 1.21
ATG3-208ENST00000495756 MYPNQ86TC9 1320 aa22.59■■□□□ 1.21
ATG3-208ENST00000495756 DTNBO60941 627 aa22.59■■□□□ 1.21
ATG3-208ENST00000495756 PPFIA3O75145 1194 aa22.59■■□□□ 1.21
ATG3-208ENST00000495756 OSBPP22059 807 aa22.59■■□□□ 1.21
ATG3-208ENST00000495756 DSG3P32926 999 aa22.59■■□□□ 1.21
ATG3-208ENST00000495756 IFNL1Q8IU54 200 aa22.59■■□□□ 1.21
ATG3-208ENST00000495756 PNMA3Q9UL41 463 aa22.59■■□□□ 1.21
ATG3-208ENST00000495756 PTPDC1A2A3K4 754 aa22.58■■□□□ 1.2
ATG3-208ENST00000495756 SPDYE16A6NNV3 312 aaPredicted RBP22.58■■□□□ 1.2
ATG3-208ENST00000495756 JAK2O60674 1132 aa22.58■■□□□ 1.2
ATG3-208ENST00000495756 FMNL1O95466 1100 aaPredicted RBP22.58■■□□□ 1.2
ATG3-208ENST00000495756 REM2Q8IYK8 340 aaPredicted RBP22.58■■□□□ 1.2
ATG3-208ENST00000495756 MTMR8Q96EF0 704 aa22.58■■□□□ 1.2
ATG3-208ENST00000495756 P2RX7Q99572 595 aaKnown RBP22.58■■□□□ 1.2
ATG3-208ENST00000495756 SLC26A6Q9BXS9 759 aa22.58■■□□□ 1.2
ATG3-208ENST00000495756 RNF26Q9BY78 433 aaPredicted RBP22.58■■□□□ 1.2
ATG3-208ENST00000495756 ZCCHC17Q9NP64 241 aaKnown RBP22.58■■□□□ 1.2
ATG3-208ENST00000495756 ADAMTS5Q9UNA0 930 aa22.58■■□□□ 1.2
ATG3-208ENST00000495756 V9GY48 417 aaPredicted RBP22.58■■□□□ 1.2
ATG3-208ENST00000495756 SSRP1Q08945 709 aaKnown RBP22.57■■□□□ 1.2
ATG3-208ENST00000495756 TRIM22Q8IYM9 498 aa22.57■■□□□ 1.2
ATG3-208ENST00000495756 SMARCC2Q8TAQ2 1214 aa22.57■■□□□ 1.2
ATG3-208ENST00000495756 PIBF1Q8WXW3 757 aa22.57■■□□□ 1.2
ATG3-208ENST00000495756 ATG4CQ96DT6 458 aa22.57■■□□□ 1.2
ATG3-208ENST00000495756 RRP36Q96EU6 259 aaKnown RBP22.57■■□□□ 1.2
ATG3-208ENST00000495756 INTS4Q96HW7 963 aaKnown RBP22.57■■□□□ 1.2
ATG3-208ENST00000495756 PIGSQ96S52 555 aa22.57■■□□□ 1.2
ATG3-208ENST00000495756 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.57■■□□□ 1.2
ATG3-208ENST00000495756 PCNTO95613 3336 aa22.57■■□□□ 1.2
ATG3-208ENST00000495756 CEP350Q5VT06 3117 aa22.56■■□□□ 1.2
ATG3-208ENST00000495756 hCG_1642624A0A1W2PR95 340 aa22.56■■□□□ 1.2
ATG3-208ENST00000495756 VWA5AO00534 786 aa22.56■■□□□ 1.2
ATG3-208ENST00000495756 PRPF3O43395 683 aaKnown RBP22.56■■□□□ 1.2
ATG3-208ENST00000495756 CYP2C8P10632 490 aa22.56■■□□□ 1.2
ATG3-208ENST00000495756 MAP2K2P36507 400 aa22.56■■□□□ 1.2
ATG3-208ENST00000495756 SNAP25P60880 206 aa22.56■■□□□ 1.2
ATG3-208ENST00000495756 HERVK_113P62684 666 aa22.56■■□□□ 1.2
ATG3-208ENST00000495756 OTUD7BQ6GQQ9 843 aa22.56■■□□□ 1.2
ATG3-208ENST00000495756 HOMER1Q86YM7 354 aa22.56■■□□□ 1.2
ATG3-208ENST00000495756 RANBP17Q9H2T7 1088 aaKnown RBP22.56■■□□□ 1.2
ATG3-208ENST00000495756 SLC38A10Q9HBR0 1119 aa22.56■■□□□ 1.2
ATG3-208ENST00000495756 STK36Q9NRP7 1315 aa22.56■■□□□ 1.2
ATG3-208ENST00000495756 ZBTB5O15062 677 aa22.55■■□□□ 1.2
ATG3-208ENST00000495756 FDX1P10109 184 aa22.55■■□□□ 1.2
ATG3-208ENST00000495756 AKAP17AQ02040 695 aaKnown RBP22.55■■□□□ 1.2
ATG3-208ENST00000495756 CDC37Q16543 378 aaPredicted RBP22.55■■□□□ 1.2
ATG3-208ENST00000495756 LBX2Q6XYB7 198 aa22.55■■□□□ 1.2
ATG3-208ENST00000495756 DDX11Q96FC9 970 aa22.55■■□□□ 1.2
ATG3-208ENST00000495756 RBM27Q9P2N5 1060 aaKnown RBP22.55■■□□□ 1.2
ATG3-208ENST00000495756 SEC63Q9UGP8 760 aaKnown RBP22.55■■□□□ 1.2
ATG3-208ENST00000495756 HSP90AA1P07900 732 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms