RNA–Protein interactions for RNA: ENST00000495522.1

CALD1-222, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 2,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-222ENST00000495522 EYA3Q99504 573 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 PCDHA6Q9UN73 950 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 PCDHA8Q9Y5H6 950 aa17.38■□□□□ 0.37
CALD1-222ENST00000495522 PHLPP2Q6ZVD8 1323 aa17.37■□□□□ 0.37
CALD1-222ENST00000495522 SNED1Q8TER0 1413 aa17.37■□□□□ 0.37
CALD1-222ENST00000495522 DDX60LQ5H9U9 1706 aaKnown RBP17.37■□□□□ 0.37
CALD1-222ENST00000495522 FAM163AQ96GL9 167 aaPredicted RBP17.37■□□□□ 0.37
CALD1-222ENST00000495522 BLZF1Q9H2G9 400 aa17.37■□□□□ 0.37
CALD1-222ENST00000495522 RMND1Q9NWS8 449 aa17.37■□□□□ 0.37
CALD1-222ENST00000495522 MTMR7Q9Y216 660 aa17.37■□□□□ 0.37
CALD1-222ENST00000495522 ADKP55263 362 aaKnown RBP17.36■□□□□ 0.37
CALD1-222ENST00000495522 NEDD1Q8NHV4 660 aa17.36■□□□□ 0.37
CALD1-222ENST00000495522 TBC1D22AQ8WUA7 517 aa17.36■□□□□ 0.37
CALD1-222ENST00000495522 MTRQ99707 1265 aa17.36■□□□□ 0.37
CALD1-222ENST00000495522 SPZ1Q9BXG8 430 aa17.36■□□□□ 0.37
CALD1-222ENST00000495522 CTNND2Q9UQB3 1225 aa17.36■□□□□ 0.37
CALD1-222ENST00000495522 PPP2R2CQ9Y2T4 447 aa17.36■□□□□ 0.37
CALD1-222ENST00000495522 FLT1P17948 1338 aa17.36■□□□□ 0.37
CALD1-222ENST00000495522 GOLGA6L9A6NEM1 432 aa17.36■□□□□ 0.37
CALD1-222ENST00000495522 FILIP1LQ4L180 1135 aa17.36■□□□□ 0.37
CALD1-222ENST00000495522 MFSD14BQ5SR56 506 aa17.36■□□□□ 0.37
CALD1-222ENST00000495522 RRAGBQ5VZM2 374 aa17.36■□□□□ 0.37
CALD1-222ENST00000495522 TRIM65Q6PJ69 517 aa17.36■□□□□ 0.37
CALD1-222ENST00000495522 DTHD1Q6ZMT9 781 aa17.36■□□□□ 0.37
CALD1-222ENST00000495522 SMAP1Q8IYB5 467 aaPredicted RBP17.36■□□□□ 0.37
CALD1-222ENST00000495522 ADD3Q9UEY8 706 aaKnown RBP17.36■□□□□ 0.37
CALD1-222ENST00000495522 KLRF2D3W0D1 207 aa17.35■□□□□ 0.37
CALD1-222ENST00000495522 TEX33O43247 280 aa17.35■□□□□ 0.37
CALD1-222ENST00000495522 STAT6P42226 847 aa17.35■□□□□ 0.37
CALD1-222ENST00000495522 CCDC93Q567U6 631 aa17.35■□□□□ 0.37
CALD1-222ENST00000495522 DISC1Q9NRI5 854 aa17.35■□□□□ 0.37
CALD1-222ENST00000495522 DNAI1Q9UI46 699 aa17.35■□□□□ 0.37
CALD1-222ENST00000495522 AKR1B15C9JRZ8 316 aaPredicted RBP17.35■□□□□ 0.37
CALD1-222ENST00000495522 LAD1O00515 517 aa17.35■□□□□ 0.37
CALD1-222ENST00000495522 PARP1P09874 1014 aaKnown RBP17.35■□□□□ 0.37
CALD1-222ENST00000495522 HOXA10P31260 410 aaPredicted RBP17.35■□□□□ 0.37
CALD1-222ENST00000495522 RHBDL3P58872 404 aa17.35■□□□□ 0.37
CALD1-222ENST00000495522 INF2Q27J81 1249 aa17.35■□□□□ 0.37
CALD1-222ENST00000495522 ZNF658Q5TYW1 1059 aaPredicted RBP17.35■□□□□ 0.37
CALD1-222ENST00000495522 TBC1D16Q8TBP0 767 aa17.35■□□□□ 0.37
CALD1-222ENST00000495522 CCDC12Q8WUD4 166 aaPredicted RBP17.35■□□□□ 0.37
CALD1-222ENST00000495522 PANX2Q96RD6 677 aa17.35■□□□□ 0.37
CALD1-222ENST00000495522 RWDD2AQ9UIY3 292 aa17.35■□□□□ 0.37
CALD1-222ENST00000495522 GAKO14976 1311 aa17.35■□□□□ 0.37
CALD1-222ENST00000495522 RPN1P04843 607 aaKnown RBP17.34■□□□□ 0.37
CALD1-222ENST00000495522 GOLGA8HP0CJ92 632 aa17.34■□□□□ 0.37
CALD1-222ENST00000495522 PBX1P40424 430 aa17.34■□□□□ 0.37
CALD1-222ENST00000495522 KARSQ15046 597 aaKnown RBP17.34■□□□□ 0.37
CALD1-222ENST00000495522 PPFIBP1Q86W92 1011 aa17.34■□□□□ 0.37
CALD1-222ENST00000495522 POLLQ9UGP5 575 aa17.34■□□□□ 0.37
CALD1-222ENST00000495522 PAK1Q13153 545 aa17.33■□□□□ 0.37
CALD1-222ENST00000495522 KRT27Q7Z3Y8 459 aa17.33■□□□□ 0.37
CALD1-222ENST00000495522 IGSF22Q8N9C0 903 aa17.33■□□□□ 0.37
CALD1-222ENST00000495522 CRAMP1Q96RY5 1269 aa17.33■□□□□ 0.37
CALD1-222ENST00000495522 ZMYND12Q9H0C1 365 aa17.33■□□□□ 0.37
CALD1-222ENST00000495522 TMEM60Q9H2L4 133 aa17.33■□□□□ 0.37
CALD1-222ENST00000495522 CDC25AP30304 524 aa17.33■□□□□ 0.36
CALD1-222ENST00000495522 PRPHP41219 470 aa17.33■□□□□ 0.36
CALD1-222ENST00000495522 NAPAP54920 295 aa17.33■□□□□ 0.36
CALD1-222ENST00000495522 SLC27A3Q5K4L6 730 aa17.33■□□□□ 0.36
CALD1-222ENST00000495522 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.33■□□□□ 0.36
CALD1-222ENST00000495522 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.33■□□□□ 0.368e-7■■■□□ 17.9
CALD1-222ENST00000495522 V9GYY5 206 aaPredicted RBP17.33■□□□□ 0.36
CALD1-222ENST00000495522 MYH1P12882 1939 aa17.32■□□□□ 0.36
CALD1-222ENST00000495522 SMARCA1P28370 1054 aa17.32■□□□□ 0.36
CALD1-222ENST00000495522 SPAG1Q07617 926 aa17.32■□□□□ 0.36
CALD1-222ENST00000495522 TOGARAM2Q6ZUX3 1019 aa17.32■□□□□ 0.36
CALD1-222ENST00000495522 KRT25Q7Z3Z0 450 aa17.32■□□□□ 0.36
CALD1-222ENST00000495522 RASSF8Q8NHQ8 419 aa17.32■□□□□ 0.36
CALD1-222ENST00000495522 RRP36Q96EU6 259 aaKnown RBP17.32■□□□□ 0.36
CALD1-222ENST00000495522 FEZ1Q99689 392 aa17.32■□□□□ 0.36
CALD1-222ENST00000495522 CCSER1Q9C0I3 900 aa17.32■□□□□ 0.36
CALD1-222ENST00000495522 RGS17Q9UGC6 210 aaPredicted RBP17.32■□□□□ 0.36
CALD1-222ENST00000495522 LIMA1Q9UHB6 759 aaKnown RBP17.32■□□□□ 0.36
CALD1-222ENST00000495522 C6orf229H3BNL8 230 aa17.32■□□□□ 0.36
CALD1-222ENST00000495522 RXRBP28702 533 aa17.32■□□□□ 0.36
CALD1-222ENST00000495522 UBA7P41226 1012 aa17.32■□□□□ 0.36
CALD1-222ENST00000495522 ELF2Q15723 593 aa17.32■□□□□ 0.36
CALD1-222ENST00000495522 TMC4Q7Z404 712 aa17.32■□□□□ 0.36
CALD1-222ENST00000495522 ZNF397Q8NF99 534 aaPredicted RBP17.32■□□□□ 0.36
CALD1-222ENST00000495522 NELFBQ8WX92 580 aa17.32■□□□□ 0.36
CALD1-222ENST00000495522 CEP95Q96GE4 821 aa17.32■□□□□ 0.36
CALD1-222ENST00000495522 NAA15Q9BXJ9 866 aaKnown RBP17.32■□□□□ 0.36
CALD1-222ENST00000495522 C6orf50Q9HD87 102 aa17.32■□□□□ 0.36
CALD1-222ENST00000495522 ITIH6Q6UXX5 1313 aa17.31■□□□□ 0.36
CALD1-222ENST00000495522 MYL1P05976 194 aa17.31■□□□□ 0.36
CALD1-222ENST00000495522 GNA11P29992 359 aa17.31■□□□□ 0.36
CALD1-222ENST00000495522 NOVP48745 357 aa17.31■□□□□ 0.36
CALD1-222ENST00000495522 DDR1Q08345 913 aa17.31■□□□□ 0.36
CALD1-222ENST00000495522 RBL2Q08999 1139 aa17.31■□□□□ 0.36
CALD1-222ENST00000495522 NAALADL2Q58DX5 795 aa17.31■□□□□ 0.36
CALD1-222ENST00000495522 USP17L2Q6R6M4 530 aa17.31■□□□□ 0.36
CALD1-222ENST00000495522 RASGRP2Q7LDG7 609 aa17.31■□□□□ 0.36
CALD1-222ENST00000495522 ANKRD20A12PQ8NF67 263 aa17.31■□□□□ 0.36
CALD1-222ENST00000495522 SEC63Q9UGP8 760 aaKnown RBP17.31■□□□□ 0.36
CALD1-222ENST00000495522 KLRG2A4D1S0 409 aaPredicted RBP17.3■□□□□ 0.36
CALD1-222ENST00000495522 LRRC10BA6NIK2 292 aa17.3■□□□□ 0.36
CALD1-222ENST00000495522 NONOQ15233 471 aaKnown RBP eCLIP17.3■□□□□ 0.36
CALD1-222ENST00000495522 KRT31Q15323 416 aa17.3■□□□□ 0.36
CALD1-222ENST00000495522 SRRTQ9BXP5 876 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms