RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 ARHGEF6Q15052 776 aa19.96■□□□□ 0.79
HDAC6-235ENST00000495515 BTNL9Q6UXG8 535 aa19.96■□□□□ 0.79
HDAC6-235ENST00000495515 CTCFLQ8NI51 663 aaPredicted RBP19.96■□□□□ 0.79
HDAC6-235ENST00000495515 NUP133Q8WUM0 1156 aa19.96■□□□□ 0.79
HDAC6-235ENST00000495515 ATG4CQ96DT6 458 aa19.96■□□□□ 0.79
HDAC6-235ENST00000495515 UPF3BQ9BZI7 483 aaKnown RBP19.96■□□□□ 0.79
HDAC6-235ENST00000495515 PDRG1Q9NUG6 133 aa19.96■□□□□ 0.79
HDAC6-235ENST00000495515 MORF4L1Q9UBU8 362 aa19.96■□□□□ 0.79
HDAC6-235ENST00000495515 GRM4Q14833 912 aa19.95■□□□□ 0.78
HDAC6-235ENST00000495515 CCAR1Q8IX12 1150 aaKnown RBP19.95■□□□□ 0.78
HDAC6-235ENST00000495515 ZNF296Q8WUU4 475 aaPredicted RBP19.95■□□□□ 0.78
HDAC6-235ENST00000495515 ERO1AQ96HE7 468 aa19.95■□□□□ 0.78
HDAC6-235ENST00000495515 RBPJLQ9UBG7 517 aa19.95■□□□□ 0.78
HDAC6-235ENST00000495515 ADAMTS5Q9UNA0 930 aa19.95■□□□□ 0.78
HDAC6-235ENST00000495515 CASP8AP2Q9UKL3 1982 aa19.94■□□□□ 0.78
HDAC6-235ENST00000495515 VWA5AO00534 786 aa19.94■□□□□ 0.78
HDAC6-235ENST00000495515 GNAQP50148 359 aa19.94■□□□□ 0.78
HDAC6-235ENST00000495515 RCAN1P53805 252 aa19.94■□□□□ 0.78
HDAC6-235ENST00000495515 ERVK-9P63128 1117 aa19.94■□□□□ 0.78
HDAC6-235ENST00000495515 ERVK-24P63145 666 aa19.94■□□□□ 0.78
HDAC6-235ENST00000495515 SYDE2Q5VT97 1194 aa19.94■□□□□ 0.78
HDAC6-235ENST00000495515 RASGRP2Q7LDG7 609 aa19.94■□□□□ 0.78
HDAC6-235ENST00000495515 BRF1Q92994 677 aa19.94■□□□□ 0.78
HDAC6-235ENST00000495515 AGXT2Q9BYV1 514 aa19.94■□□□□ 0.78
HDAC6-235ENST00000495515 KLF18A0A0U1RQI7 1052 aa19.93■□□□□ 0.78
HDAC6-235ENST00000495515 ZBTB43O43298 467 aa19.93■□□□□ 0.78
HDAC6-235ENST00000495515 GOLGA8HP0CJ92 632 aa19.93■□□□□ 0.78
HDAC6-235ENST00000495515 ANKRD1Q15327 319 aa19.93■□□□□ 0.78
HDAC6-235ENST00000495515 TTBK2Q6IQ55 1244 aa19.93■□□□□ 0.78
HDAC6-235ENST00000495515 APOA5Q6Q788 366 aa19.93■□□□□ 0.78
HDAC6-235ENST00000495515 IL27Q8NEV9 243 aa19.93■□□□□ 0.78
HDAC6-235ENST00000495515 LZTS2Q9BRK4 669 aa19.93■□□□□ 0.78
HDAC6-235ENST00000495515 TXNRD2Q9NNW7 524 aa19.93■□□□□ 0.78
HDAC6-235ENST00000495515 PRR12Q9ULL5 1215 aa19.93■□□□□ 0.78
HDAC6-235ENST00000495515 NAP1L2Q9ULW6 460 aaPredicted RBP19.93■□□□□ 0.78
HDAC6-235ENST00000495515 PALM3A6NDB9 673 aaPredicted RBP19.92■□□□□ 0.78
HDAC6-235ENST00000495515 KLRF2D3W0D1 207 aa19.92■□□□□ 0.78
HDAC6-235ENST00000495515 COPB2P35606 906 aa19.92■□□□□ 0.78
HDAC6-235ENST00000495515 SLC16A2P36021 539 aa19.92■□□□□ 0.78
HDAC6-235ENST00000495515 OAZ1P54368 228 aa19.92■□□□□ 0.78
HDAC6-235ENST00000495515 LACTBP83111 547 aaPredicted RBP19.92■□□□□ 0.78
HDAC6-235ENST00000495515 PLS1Q14651 629 aa19.92■□□□□ 0.78
HDAC6-235ENST00000495515 PPP2R5BQ15173 497 aa19.92■□□□□ 0.78
HDAC6-235ENST00000495515 MICU3Q86XE3 530 aa19.92■□□□□ 0.78
HDAC6-235ENST00000495515 MYL10Q9BUA6 226 aa19.92■□□□□ 0.78
HDAC6-235ENST00000495515 ALDH8A1Q9H2A2 487 aaPredicted RBP19.92■□□□□ 0.78
HDAC6-235ENST00000495515 SLC38A10Q9HBR0 1119 aa19.92■□□□□ 0.78
HDAC6-235ENST00000495515 MAD2L2Q9UI95 211 aa19.92■□□□□ 0.78
HDAC6-235ENST00000495515 PNMA2Q9UL42 364 aa19.92■□□□□ 0.78
HDAC6-235ENST00000495515 DHX16O60231 1041 aaKnown RBP19.91■□□□□ 0.78
HDAC6-235ENST00000495515 NEK4P51957 841 aa19.91■□□□□ 0.78
HDAC6-235ENST00000495515 FCGRTP55899 365 aa19.91■□□□□ 0.78
HDAC6-235ENST00000495515 APOBRQ0VD83 1088 aa19.91■□□□□ 0.78
HDAC6-235ENST00000495515 FANCBQ8NB91 859 aa19.91■□□□□ 0.78
HDAC6-235ENST00000495515 TBC1D32Q96NH3 1257 aa19.91■□□□□ 0.78
HDAC6-235ENST00000495515 TEX13BQ9BXU2 312 aa19.91■□□□□ 0.78
HDAC6-235ENST00000495515 SPATC1LQ9H0A9 340 aa19.91■□□□□ 0.78
HDAC6-235ENST00000495515 CWC22Q9HCG8 908 aaKnown RBP19.91■□□□□ 0.78
HDAC6-235ENST00000495515 RBM28Q9NW13 759 aaKnown RBP19.91■□□□□ 0.78
HDAC6-235ENST00000495515 BTBD7Q9P203 1132 aa19.91■□□□□ 0.78
HDAC6-235ENST00000495515 BRPF3Q9ULD4 1205 aa19.91■□□□□ 0.78
HDAC6-235ENST00000495515 CCDC196A0A1B0GTZ2 297 aa19.9■□□□□ 0.78
HDAC6-235ENST00000495515 GOLGA8BA8MQT2 603 aa19.9■□□□□ 0.78
HDAC6-235ENST00000495515 ATP2A1O14983 1001 aa19.9■□□□□ 0.78
HDAC6-235ENST00000495515 CNMDO75829 334 aa19.9■□□□□ 0.78
HDAC6-235ENST00000495515 SLC25A27O95847 323 aa19.9■□□□□ 0.78
HDAC6-235ENST00000495515 MAPK4P31152 587 aa19.9■□□□□ 0.78
HDAC6-235ENST00000495515 STAT3P40763 770 aa19.9■□□□□ 0.78
HDAC6-235ENST00000495515 TMEM132BQ14DG7 1078 aa19.9■□□□□ 0.78
HDAC6-235ENST00000495515 STAG2Q8N3U4 1231 aa19.9■□□□□ 0.78
HDAC6-235ENST00000495515 UBA5Q9GZZ9 404 aa19.9■□□□□ 0.78
HDAC6-235ENST00000495515 GOLGA8AA7E2F4 631 aa19.89■□□□□ 0.77
HDAC6-235ENST00000495515 FMNL1O95466 1100 aaPredicted RBP19.89■□□□□ 0.77
HDAC6-235ENST00000495515 GNRH1P01148 92 aa19.89■□□□□ 0.77
HDAC6-235ENST00000495515 HOXD10P28358 340 aa19.89■□□□□ 0.77
HDAC6-235ENST00000495515 SMARCA1P28370 1054 aa19.89■□□□□ 0.77
HDAC6-235ENST00000495515 PSMC4P43686 418 aa19.89■□□□□ 0.77
HDAC6-235ENST00000495515 EVCP57679 992 aa19.89■□□□□ 0.77
HDAC6-235ENST00000495515 TOB2Q14106 344 aaPredicted RBP19.89■□□□□ 0.77
HDAC6-235ENST00000495515 RABEP1Q15276 862 aa19.89■□□□□ 0.77
HDAC6-235ENST00000495515 RTN1Q16799 776 aa19.89■□□□□ 0.77
HDAC6-235ENST00000495515 Q3C1V9 767 aa19.89■□□□□ 0.77
HDAC6-235ENST00000495515 POTEEQ6S8J3 1075 aa19.89■□□□□ 0.77
HDAC6-235ENST00000495515 CPXCR1Q8N123 301 aa19.89■□□□□ 0.77
HDAC6-235ENST00000495515 SHCBP1Q8NEM2 672 aa19.89■□□□□ 0.77
HDAC6-235ENST00000495515 REPS2Q8NFH8 660 aa19.89■□□□□ 0.77
HDAC6-235ENST00000495515 CD99L2Q8TCZ2 262 aa19.89■□□□□ 0.77
HDAC6-235ENST00000495515 RANBP17Q9H2T7 1088 aaKnown RBP19.89■□□□□ 0.77
HDAC6-235ENST00000495515 ZNF214Q9UL59 606 aaPredicted RBP19.89■□□□□ 0.77
HDAC6-235ENST00000495515 TNPO2O14787 897 aaKnown RBP19.88■□□□□ 0.77
HDAC6-235ENST00000495515 RXRAP19793 462 aa19.88■□□□□ 0.77
HDAC6-235ENST00000495515 METAP2P50579 478 aaKnown RBP eCLIP19.88■□□□□ 0.77
HDAC6-235ENST00000495515 SNRNP48Q6IEG0 339 aaKnown RBP19.88■□□□□ 0.77
HDAC6-235ENST00000495515 RIOX2Q8IUF8 465 aa19.88■□□□□ 0.77
HDAC6-235ENST00000495515 CCDC144CPQ8IYA2 1237 aa19.88■□□□□ 0.77
HDAC6-235ENST00000495515 ADGRF4Q8IZF3 695 aa19.88■□□□□ 0.77
HDAC6-235ENST00000495515 COA7Q96BR5 231 aa19.88■□□□□ 0.77
HDAC6-235ENST00000495515 MOV10L1Q9BXT6 1211 aaKnown RBP19.88■□□□□ 0.77
HDAC6-235ENST00000495515 MROH8Q9H579 483 aa19.88■□□□□ 0.77
HDAC6-235ENST00000495515 EFCC1Q9HA90 598 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms