RNA–Protein interactions for RNA: ENST00000495457.1

RPRD1B-206, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-206ENST00000495457 BMP3P12645 472 aa16.89■□□□□ 0.29
RPRD1B-206ENST00000495457 SLC4A3P48751 1232 aa16.89■□□□□ 0.29
RPRD1B-206ENST00000495457 HAND2P61296 217 aa16.89■□□□□ 0.29
RPRD1B-206ENST00000495457 KCTD2Q14681 263 aa16.89■□□□□ 0.29
RPRD1B-206ENST00000495457 PRAMEF19Q5SWL8 479 aa16.89■□□□□ 0.29
RPRD1B-206ENST00000495457 SNRNP48Q6IEG0 339 aaKnown RBP16.89■□□□□ 0.29
RPRD1B-206ENST00000495457 RASGRP2Q7LDG7 609 aa16.89■□□□□ 0.29
RPRD1B-206ENST00000495457 CPXCR1Q8N123 301 aa16.89■□□□□ 0.29
RPRD1B-206ENST00000495457 TEX13BQ9BXU2 312 aa16.89■□□□□ 0.29
RPRD1B-206ENST00000495457 RAVER2Q9HCJ3 691 aaKnown RBP16.89■□□□□ 0.29
RPRD1B-206ENST00000495457 SLC5A4Q9NY91 659 aa16.89■□□□□ 0.29
RPRD1B-206ENST00000495457 FEM1BQ9UK73 627 aa16.89■□□□□ 0.29
RPRD1B-206ENST00000495457 ISY1Q9ULR0 285 aaKnown RBP16.89■□□□□ 0.29
RPRD1B-206ENST00000495457 CEP290O15078 2479 aa16.89■□□□□ 0.29
RPRD1B-206ENST00000495457 ORC4O43929 436 aa16.88■□□□□ 0.29
RPRD1B-206ENST00000495457 ZBED4O75132 1171 aa16.88■□□□□ 0.29
RPRD1B-206ENST00000495457 COL6A1P12109 1028 aa16.88■□□□□ 0.29
RPRD1B-206ENST00000495457 PDE4AP27815 886 aa16.88■□□□□ 0.29
RPRD1B-206ENST00000495457 RRP12Q5JTH9 1297 aaKnown RBP16.88■□□□□ 0.29
RPRD1B-206ENST00000495457 ANO1Q5XXA6 986 aa16.88■□□□□ 0.29
RPRD1B-206ENST00000495457 CWC27Q6UX04 472 aaKnown RBP16.88■□□□□ 0.29
RPRD1B-206ENST00000495457 SLC38A10Q9HBR0 1119 aa16.88■□□□□ 0.29
RPRD1B-206ENST00000495457 TOMM22Q9NS69 142 aa16.88■□□□□ 0.29
RPRD1B-206ENST00000495457 COL11A1P12107 1806 aaPredicted RBP16.87■□□□□ 0.29
RPRD1B-206ENST00000495457 TMEM232C9JQI7 657 aa16.87■□□□□ 0.29
RPRD1B-206ENST00000495457 MCCP23508 829 aa16.87■□□□□ 0.29
RPRD1B-206ENST00000495457 COPB2P35606 906 aa16.87■□□□□ 0.29
RPRD1B-206ENST00000495457 ZNF792Q3KQV3 632 aa16.87■□□□□ 0.29
RPRD1B-206ENST00000495457 C7orf61Q8IZ16 206 aa16.87■□□□□ 0.29
RPRD1B-206ENST00000495457 GMCL1Q96IK5 515 aa16.87■□□□□ 0.29
RPRD1B-206ENST00000495457 MTMR7Q9Y216 660 aa16.87■□□□□ 0.29
RPRD1B-206ENST00000495457 ZMYM6O95789 1325 aa16.87■□□□□ 0.29
RPRD1B-206ENST00000495457 ATP2A1O14983 1001 aa16.86■□□□□ 0.29
RPRD1B-206ENST00000495457 MSCO60682 206 aa16.86■□□□□ 0.29
RPRD1B-206ENST00000495457 SLC1A4P43007 532 aa16.86■□□□□ 0.29
RPRD1B-206ENST00000495457 NOVP48745 357 aa16.86■□□□□ 0.29
RPRD1B-206ENST00000495457 KCTD1Q719H9 257 aa16.86■□□□□ 0.29
RPRD1B-206ENST00000495457 TBC1D10CQ8IV04 446 aa16.86■□□□□ 0.29
RPRD1B-206ENST00000495457 DIAPH3Q9NSV4 1193 aa16.86■□□□□ 0.29
RPRD1B-206ENST00000495457 PCDH10Q9P2E7 1040 aa16.86■□□□□ 0.29
RPRD1B-206ENST00000495457 RBM27Q9P2N5 1060 aaKnown RBP16.86■□□□□ 0.29
RPRD1B-206ENST00000495457 CTDP1Q9Y5B0 961 aaPredicted RBP16.86■□□□□ 0.29
RPRD1B-206ENST00000495457 MYH4Q9Y623 1939 aa16.86■□□□□ 0.29
RPRD1B-206ENST00000495457 STAT2P52630 851 aa16.85■□□□□ 0.29
RPRD1B-206ENST00000495457 PPP4R3BQ5MIZ7 849 aa16.85■□□□□ 0.29
RPRD1B-206ENST00000495457 STAG1Q8WVM7 1258 aa16.85■□□□□ 0.29
RPRD1B-206ENST00000495457 TINF2Q9BSI4 451 aa16.85■□□□□ 0.29
RPRD1B-206ENST00000495457 ZMYND8Q9ULU4 1186 aaPredicted RBP16.85■□□□□ 0.29
RPRD1B-206ENST00000495457 SEPT4O43236 478 aa16.84■□□□□ 0.29
RPRD1B-206ENST00000495457 GSPT1P15170 499 aaKnown RBP16.84■□□□□ 0.29
RPRD1B-206ENST00000495457 TAL1P17542 331 aaPredicted RBP16.84■□□□□ 0.29
RPRD1B-206ENST00000495457 MFAP1P55081 439 aaKnown RBP16.84■□□□□ 0.29
RPRD1B-206ENST00000495457 IKQ13123 557 aaPredicted RBP16.84■□□□□ 0.29
RPRD1B-206ENST00000495457 LRRC26Q2I0M4 334 aa16.84■□□□□ 0.29
RPRD1B-206ENST00000495457 DDX11Q96FC9 970 aa16.84■□□□□ 0.29
RPRD1B-206ENST00000495457 PRO3102Q9H379 93 aa16.84■□□□□ 0.29
RPRD1B-206ENST00000495457 DIS3Q9Y2L1 958 aaKnown RBP16.84■□□□□ 0.29
RPRD1B-206ENST00000495457 DNAJC25-GNG10A0A024R161 153 aa16.83■□□□□ 0.28
RPRD1B-206ENST00000495457 ZNF536O15090 1300 aa16.83■□□□□ 0.28
RPRD1B-206ENST00000495457 SYN1P17600 705 aa16.83■□□□□ 0.28
RPRD1B-206ENST00000495457 FXR1P51114 621 aaKnown RBP eCLIP16.83■□□□□ 0.28
RPRD1B-206ENST00000495457 OAZ1P54368 228 aa16.83■□□□□ 0.28
RPRD1B-206ENST00000495457 SNAP25P60880 206 aa16.83■□□□□ 0.28
RPRD1B-206ENST00000495457 AKNAD1Q5T1N1 836 aa16.83■□□□□ 0.28
RPRD1B-206ENST00000495457 GJC2Q5T442 439 aaPredicted RBP16.83■□□□□ 0.28
RPRD1B-206ENST00000495457 RCSD1Q6JBY9 416 aa16.83■□□□□ 0.28
RPRD1B-206ENST00000495457 MFSD6Q6ZSS7 791 aa16.83■□□□□ 0.28
RPRD1B-206ENST00000495457 FAM160B2Q86V87 743 aa16.83■□□□□ 0.28
RPRD1B-206ENST00000495457 CHURC1Q8WUH1 139 aa16.83■□□□□ 0.28
RPRD1B-206ENST00000495457 ALPK3Q96L96 1907 aa16.83■□□□□ 0.28
RPRD1B-206ENST00000495457 TMEM47Q9BQJ4 181 aa16.83■□□□□ 0.28
RPRD1B-206ENST00000495457 SENP6Q9GZR1 1112 aaPredicted RBP16.83■□□□□ 0.28
RPRD1B-206ENST00000495457 IL25Q9H293 177 aa16.83■□□□□ 0.28
RPRD1B-206ENST00000495457 HOMER2Q9NSB8 354 aa16.83■□□□□ 0.28
RPRD1B-206ENST00000495457 NEDD4P46934 1319 aa16.82■□□□□ 0.28
RPRD1B-206ENST00000495457 HIP1O00291 1037 aa16.82■□□□□ 0.28
RPRD1B-206ENST00000495457 DNM1LO00429 736 aa16.82■□□□□ 0.28
RPRD1B-206ENST00000495457 MYCNP04198 464 aaPredicted RBP16.82■□□□□ 0.28
RPRD1B-206ENST00000495457 CCDC96Q2M329 555 aa16.82■□□□□ 0.28
RPRD1B-206ENST00000495457 TTBK2Q6IQ55 1244 aa16.82■□□□□ 0.28
RPRD1B-206ENST00000495457 ANKRD35Q8N283 1001 aa16.82■□□□□ 0.28
RPRD1B-206ENST00000495457 AGBL1Q96MI9 1066 aa16.82■□□□□ 0.28
RPRD1B-206ENST00000495457 TCP11L1Q9NUJ3 509 aa16.82■□□□□ 0.28
RPRD1B-206ENST00000495457 PRR12Q9ULL5 1215 aa16.82■□□□□ 0.28
RPRD1B-206ENST00000495457 RANBP2P49792 3224 aaKnown RBP16.81■□□□□ 0.28
RPRD1B-206ENST00000495457 ZNF213O14771 459 aa16.81■□□□□ 0.28
RPRD1B-206ENST00000495457 PLA2G6O60733 806 aa16.81■□□□□ 0.28
RPRD1B-206ENST00000495457 ZNF865P0CJ78 1059 aaPredicted RBP16.81■□□□□ 0.28
RPRD1B-206ENST00000495457 FDX1P10109 184 aa16.81■□□□□ 0.28
RPRD1B-206ENST00000495457 TOP1P11387 765 aaKnown RBP16.81■□□□□ 0.28
RPRD1B-206ENST00000495457 ATN1P54259 1190 aaPredicted RBP16.81■□□□□ 0.28
RPRD1B-206ENST00000495457 TTC22Q5TAA0 569 aa16.81■□□□□ 0.28
RPRD1B-206ENST00000495457 CCDC174Q6PII3 467 aa16.81■□□□□ 0.28
RPRD1B-206ENST00000495457 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.81■□□□□ 0.28
RPRD1B-206ENST00000495457 CHST13Q8NET6 341 aa16.81■□□□□ 0.28
RPRD1B-206ENST00000495457 FGD4Q96M96 766 aa16.81■□□□□ 0.28
RPRD1B-206ENST00000495457 FRMPD3Q5JV73 1810 aa16.81■□□□□ 0.28
RPRD1B-206ENST00000495457 FRMPD2Q68DX3 1309 aaPredicted RBP16.8■□□□□ 0.28
RPRD1B-206ENST00000495457 SNAI1O95863 264 aaPredicted RBP16.8■□□□□ 0.28
RPRD1B-206ENST00000495457 PCP11498 1178 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms