RNA–Protein interactions for RNA: ENST00000495288.5

PSMB4-206, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 986 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-206ENST00000495288 VGLL4Q14135 290 aa20.2■□□□□ 0.82
PSMB4-206ENST00000495288 WWC2Q6AWC2 1192 aa20.2■□□□□ 0.82
PSMB4-206ENST00000495288 DIS3L2Q8IYB7 885 aaKnown RBP20.2■□□□□ 0.82
PSMB4-206ENST00000495288 CNPY2Q9Y2B0 182 aa20.2■□□□□ 0.82
PSMB4-206ENST00000495288 SRCAPQ6ZRS2 3230 aa20.19■□□□□ 0.82
PSMB4-206ENST00000495288 ATAD5Q96QE3 1844 aa20.19■□□□□ 0.82
PSMB4-206ENST00000495288 PNMA6FA0A0J9YX94 578 aa20.19■□□□□ 0.82
PSMB4-206ENST00000495288 BTBD18B2RXH4 712 aa20.19■□□□□ 0.82
PSMB4-206ENST00000495288 USP14P54578 494 aa20.19■□□□□ 0.82
PSMB4-206ENST00000495288 SNAP25P60880 206 aa20.19■□□□□ 0.82
PSMB4-206ENST00000495288 FMR1Q06787 632 aaKnown RBP eCLIP20.19■□□□□ 0.82
PSMB4-206ENST00000495288 CHURC1Q8WUH1 139 aa20.19■□□□□ 0.82
PSMB4-206ENST00000495288 SHISA4Q96DD7 197 aa20.19■□□□□ 0.82
PSMB4-206ENST00000495288 PHF20Q9BVI0 1012 aa20.19■□□□□ 0.82
PSMB4-206ENST00000495288 ELP3Q9H9T3 547 aa20.19■□□□□ 0.82
PSMB4-206ENST00000495288 BRMS1Q9HCU9 246 aa20.19■□□□□ 0.82
PSMB4-206ENST00000495288 SH3GLB2Q9NR46 395 aa20.19■□□□□ 0.82
PSMB4-206ENST00000495288 BARHL2Q9NY43 387 aa20.19■□□□□ 0.82
PSMB4-206ENST00000495288 SNCAIPQ9Y6H5 919 aa20.19■□□□□ 0.82
PSMB4-206ENST00000495288 STXBP3O00186 592 aa20.18■□□□□ 0.82
PSMB4-206ENST00000495288 CALML3P27482 149 aa20.18■□□□□ 0.82
PSMB4-206ENST00000495288 KRT2P35908 639 aa20.18■□□□□ 0.82
PSMB4-206ENST00000495288 NAPAP54920 295 aa20.18■□□□□ 0.82
PSMB4-206ENST00000495288 BACE1P56817 501 aa20.18■□□□□ 0.82
PSMB4-206ENST00000495288 DGKZQ13574 1117 aa20.18■□□□□ 0.82
PSMB4-206ENST00000495288 BTNL9Q6UXG8 535 aa20.18■□□□□ 0.82
PSMB4-206ENST00000495288 BRAPQ7Z569 592 aa20.18■□□□□ 0.82
PSMB4-206ENST00000495288 ANKRD13AQ8IZ07 590 aa20.18■□□□□ 0.82
PSMB4-206ENST00000495288 LPAR1Q92633 364 aa20.18■□□□□ 0.82
PSMB4-206ENST00000495288 ZNF396Q96N95 335 aaPredicted RBP20.18■□□□□ 0.82
PSMB4-206ENST00000495288 EMILIN3Q9NT22 766 aa20.18■□□□□ 0.82
PSMB4-206ENST00000495288 BAZ2BQ9UIF8 2168 aaKnown RBP20.17■□□□□ 0.82
PSMB4-206ENST00000495288 DDX11L8A8MPP1 907 aa20.17■□□□□ 0.82
PSMB4-206ENST00000495288 ZBTB5O15062 677 aa20.17■□□□□ 0.82
PSMB4-206ENST00000495288 PRPF40AO75400 957 aaKnown RBP20.17■□□□□ 0.82
PSMB4-206ENST00000495288 STAT2P52630 851 aa20.17■□□□□ 0.82
PSMB4-206ENST00000495288 KRT85P78386 507 aa20.17■□□□□ 0.82
PSMB4-206ENST00000495288 FAM160B2Q86V87 743 aa20.17■□□□□ 0.82
PSMB4-206ENST00000495288 CCDC148Q8NFR7 591 aa20.17■□□□□ 0.82
PSMB4-206ENST00000495288 OXER1Q8TDS5 423 aa20.17■□□□□ 0.82
PSMB4-206ENST00000495288 CCDC12Q8WUD4 166 aaPredicted RBP20.17■□□□□ 0.82
PSMB4-206ENST00000495288 KIFC2Q96AC6 838 aa20.17■□□□□ 0.82
PSMB4-206ENST00000495288 COA7Q96BR5 231 aa20.17■□□□□ 0.82
PSMB4-206ENST00000495288 CLMNQ96JQ2 1002 aa20.17■□□□□ 0.82
PSMB4-206ENST00000495288 FOXP1Q9H334 677 aaPredicted RBP20.17■□□□□ 0.82
PSMB4-206ENST00000495288 GDPD2Q9HCC8 539 aa20.17■□□□□ 0.82
PSMB4-206ENST00000495288 FEM1BQ9UK73 627 aa20.17■□□□□ 0.82
PSMB4-206ENST00000495288 PRR12Q9ULL5 1215 aa20.17■□□□□ 0.82
PSMB4-206ENST00000495288 DOCK1Q14185 1865 aa20.17■□□□□ 0.82
PSMB4-206ENST00000495288 MYH6P13533 1939 aa20.17■□□□□ 0.82
PSMB4-206ENST00000495288 C19orf81C9J6K1 198 aa20.16■□□□□ 0.82
PSMB4-206ENST00000495288 WDR46O15213 610 aaKnown RBP20.16■□□□□ 0.82
PSMB4-206ENST00000495288 FIBPO43427 364 aa20.16■□□□□ 0.82
PSMB4-206ENST00000495288 U2AF2P26368 475 aaKnown RBP eCLIP20.16■□□□□ 0.829e-7■□□□□ 8.5
PSMB4-206ENST00000495288 CEBPZQ03701 1054 aaKnown RBP20.16■□□□□ 0.82
PSMB4-206ENST00000495288 NR5A1Q13285 461 aa20.16■□□□□ 0.82
PSMB4-206ENST00000495288 CDC37Q16543 378 aaPredicted RBP20.16■□□□□ 0.82
PSMB4-206ENST00000495288 QRICH1Q2TAL8 776 aa20.16■□□□□ 0.82
PSMB4-206ENST00000495288 MTMR8Q96EF0 704 aa20.16■□□□□ 0.82
PSMB4-206ENST00000495288 TANGO6Q9C0B7 1094 aa20.16■□□□□ 0.82
PSMB4-206ENST00000495288 TMOD4Q9NZQ9 345 aa20.16■□□□□ 0.82
PSMB4-206ENST00000495288 AFG3L2Q9Y4W6 797 aa20.16■□□□□ 0.82
PSMB4-206ENST00000495288 SMCO2A6NFE2 343 aa20.15■□□□□ 0.82
PSMB4-206ENST00000495288 HMGCS2P54868 508 aa20.15■□□□□ 0.82
PSMB4-206ENST00000495288 MAP3K11Q16584 847 aa20.15■□□□□ 0.82
PSMB4-206ENST00000495288 TYW1BQ6NUM6 668 aa20.15■□□□□ 0.82
PSMB4-206ENST00000495288 BLIDQ8IZY5 108 aa20.15■□□□□ 0.82
PSMB4-206ENST00000495288 CNKSR2Q8WXI2 1034 aa20.15■□□□□ 0.82
PSMB4-206ENST00000495288 C6orf50Q9HD87 102 aa20.15■□□□□ 0.82
PSMB4-206ENST00000495288 FBXO28Q9NVF7 368 aa20.15■□□□□ 0.82
PSMB4-206ENST00000495288 CFAP45Q9UL16 551 aa20.15■□□□□ 0.82
PSMB4-206ENST00000495288 hCG_1984214I3L0E3 225 aa20.14■□□□□ 0.81
PSMB4-206ENST00000495288 PLA2G6O60733 806 aa20.14■□□□□ 0.81
PSMB4-206ENST00000495288 PPP1R11O60927 126 aaPredicted RBP20.14■□□□□ 0.81
PSMB4-206ENST00000495288 TPRNQ4KMQ1 711 aa20.14■□□□□ 0.81
PSMB4-206ENST00000495288 MYSM1Q5VVJ2 828 aa20.14■□□□□ 0.81
PSMB4-206ENST00000495288 CHADLQ6NUI6 762 aa20.14■□□□□ 0.81
PSMB4-206ENST00000495288 FBXO11Q86XK2 927 aa20.14■□□□□ 0.81
PSMB4-206ENST00000495288 ERO1BQ86YB8 467 aa20.14■□□□□ 0.81
PSMB4-206ENST00000495288 NOSTRINQ8IVI9 506 aa20.14■□□□□ 0.81
PSMB4-206ENST00000495288 ZNF713Q8N859 430 aaPredicted RBP20.14■□□□□ 0.81
PSMB4-206ENST00000495288 SLC10A4Q96EP9 437 aa20.14■□□□□ 0.81
PSMB4-206ENST00000495288 OTUD5Q96G74 571 aa20.14■□□□□ 0.81
PSMB4-206ENST00000495288 RPAP3Q9H6T3 665 aaPredicted RBP20.14■□□□□ 0.81
PSMB4-206ENST00000495288 PCDHA4Q9UN74 947 aa20.14■□□□□ 0.81
PSMB4-206ENST00000495288 VCAM1P19320 739 aa20.13■□□□□ 0.81
PSMB4-206ENST00000495288 PTMSP20962 102 aa20.13■□□□□ 0.81
PSMB4-206ENST00000495288 CSPP1Q1MSJ5 1256 aa20.13■□□□□ 0.81
PSMB4-206ENST00000495288 GALNT17Q6IS24 598 aa20.13■□□□□ 0.81
PSMB4-206ENST00000495288 CCDC174Q6PII3 467 aa20.13■□□□□ 0.81
PSMB4-206ENST00000495288 FAM177A1Q8N128 213 aaPredicted RBP20.13■□□□□ 0.81
PSMB4-206ENST00000495288 SLF1Q9BQI6 1058 aa20.13■□□□□ 0.81
PSMB4-206ENST00000495288 AMNQ9BXJ7 453 aa20.13■□□□□ 0.81
PSMB4-206ENST00000495288 PCDHA1Q9Y5I3 950 aa20.13■□□□□ 0.81
PSMB4-206ENST00000495288 ADAMTS3O15072 1205 aa20.12■□□□□ 0.81
PSMB4-206ENST00000495288 CELF2O95319 508 aaKnown RBP20.12■□□□□ 0.81
PSMB4-206ENST00000495288 ATP2B1P20020 1258 aa20.12■□□□□ 0.81
PSMB4-206ENST00000495288 GNA11P29992 359 aa20.12■□□□□ 0.81
PSMB4-206ENST00000495288 PPATQ06203 517 aa20.12■□□□□ 0.81
PSMB4-206ENST00000495288 LDLRAD1Q5T700 205 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms