RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 KLHDC4Q8TBB5 520 aa9.31□□□□□ -0.92
RPGR-210ENST00000494841 RBM17Q96I25 401 aaKnown RBP9.31□□□□□ -0.92
RPGR-210ENST00000494841 ZFYVE28Q9HCC9 887 aa9.31□□□□□ -0.92
RPGR-210ENST00000494841 PIM2Q9P1W9 311 aa9.31□□□□□ -0.92
RPGR-210ENST00000494841 RIC1Q4ADV7 1423 aa9.31□□□□□ -0.92
RPGR-210ENST00000494841 PNMA6EA0A0J9YXQ4 647 aa9.3□□□□□ -0.92
RPGR-210ENST00000494841 J3QW42 95 aa9.3□□□□□ -0.92
RPGR-210ENST00000494841 CPB1P15086 417 aa9.3□□□□□ -0.92
RPGR-210ENST00000494841 HOXB4P17483 251 aaPredicted RBP9.3□□□□□ -0.92
RPGR-210ENST00000494841 ATP8B2P98198 1209 aa9.3□□□□□ -0.92
RPGR-210ENST00000494841 HYAL2Q12891 473 aa9.3□□□□□ -0.92
RPGR-210ENST00000494841 IFIT5Q13325 482 aaKnown RBP9.3□□□□□ -0.92
RPGR-210ENST00000494841 CCDC57Q2TAC2 916 aa9.3□□□□□ -0.92
RPGR-210ENST00000494841 TTLL6Q8N841 843 aa9.3□□□□□ -0.92
RPGR-210ENST00000494841 CRAMP1Q96RY5 1269 aa9.3□□□□□ -0.92
RPGR-210ENST00000494841 ENAMQ9NRM1 1142 aa9.3□□□□□ -0.92
RPGR-210ENST00000494841 HDAC5Q9UQL6 1122 aa9.3□□□□□ -0.92
RPGR-210ENST00000494841 SPEF2Q9C093 1822 aa9.3□□□□□ -0.92
RPGR-210ENST00000494841 DLEC1Q9Y238 1755 aa9.29□□□□□ -0.92
RPGR-210ENST00000494841 ANKRD18BA2A2Z9 1011 aa9.29□□□□□ -0.92
RPGR-210ENST00000494841 SRGAP3O43295 1099 aa9.29□□□□□ -0.92
RPGR-210ENST00000494841 ALBP02768 609 aa9.29□□□□□ -0.92
RPGR-210ENST00000494841 AMPD1P23109 780 aa9.29□□□□□ -0.92
RPGR-210ENST00000494841 ALDH1B1P30837 517 aa9.29□□□□□ -0.92
RPGR-210ENST00000494841 RFX5P48382 616 aaPredicted RBP9.29□□□□□ -0.92
RPGR-210ENST00000494841 RPS8P62241 208 aaKnown RBP9.29□□□□□ -0.92
RPGR-210ENST00000494841 FMR1Q06787 632 aaKnown RBP eCLIP9.29□□□□□ -0.92
RPGR-210ENST00000494841 GRAPQ13588 217 aa9.29□□□□□ -0.92
RPGR-210ENST00000494841 DALRD3Q5D0E6 543 aaKnown RBP9.29□□□□□ -0.92
RPGR-210ENST00000494841 PERM1Q5SV97 790 aa9.29□□□□□ -0.92
RPGR-210ENST00000494841 PRPF40BQ6NWY9 871 aaKnown RBP9.29□□□□□ -0.92
RPGR-210ENST00000494841 KANK3Q6NY19 840 aa9.29□□□□□ -0.92
RPGR-210ENST00000494841 CEP85Q6P2H3 762 aa9.29□□□□□ -0.92
RPGR-210ENST00000494841 C20orf204Q6ZNR8 217 aa9.29□□□□□ -0.92
RPGR-210ENST00000494841 SIRT2Q8IXJ6 389 aa9.29□□□□□ -0.92
RPGR-210ENST00000494841 NEDD1Q8NHV4 660 aa9.29□□□□□ -0.92
RPGR-210ENST00000494841 GRAPLQ8TC17 118 aaPredicted RBP9.29□□□□□ -0.92
RPGR-210ENST00000494841 LPIN3Q9BQK8 851 aa9.29□□□□□ -0.92
RPGR-210ENST00000494841 CHMP4BQ9H444 224 aaKnown RBP9.29□□□□□ -0.92
RPGR-210ENST00000494841 SALL4Q9UJQ4 1053 aa9.29□□□□□ -0.92
RPGR-210ENST00000494841 PA2G4Q9UQ80 394 aaKnown RBP9.29□□□□□ -0.92
RPGR-210ENST00000494841 BRCA1P38398 1863 aaKnown RBP9.29□□□□□ -0.92
RPGR-210ENST00000494841 ANKRD33BA6NCL7 494 aa9.28□□□□□ -0.92
RPGR-210ENST00000494841 EIF1AYO14602 144 aaKnown RBP9.28□□□□□ -0.92
RPGR-210ENST00000494841 BBOX1O75936 387 aa9.28□□□□□ -0.92
RPGR-210ENST00000494841 NEFLP07196 543 aa9.28□□□□□ -0.92
RPGR-210ENST00000494841 EIF2AK2P19525 551 aaKnown RBP9.28□□□□□ -0.92
RPGR-210ENST00000494841 DGKGP49619 791 aa9.28□□□□□ -0.92
RPGR-210ENST00000494841 PTPN12Q05209 780 aaKnown RBP9.28□□□□□ -0.92
RPGR-210ENST00000494841 TAF7LQ5H9L4 462 aa9.28□□□□□ -0.92
RPGR-210ENST00000494841 PSAPL1Q6NUJ1 521 aa9.28□□□□□ -0.92
RPGR-210ENST00000494841 ANKRD18AQ8IVF6 992 aa9.28□□□□□ -0.92
RPGR-210ENST00000494841 PMEPA1Q969W9 287 aa9.28□□□□□ -0.92
RPGR-210ENST00000494841 CSRNP1Q96S65 589 aa9.28□□□□□ -0.92
RPGR-210ENST00000494841 PUS3Q9BZE2 481 aaKnown RBP9.28□□□□□ -0.92
RPGR-210ENST00000494841 SIL1Q9H173 461 aa9.28□□□□□ -0.92
RPGR-210ENST00000494841 RTL9Q8NET4 1388 aa9.27□□□□□ -0.93
RPGR-210ENST00000494841 WTIPA6NIX2 430 aaPredicted RBP9.27□□□□□ -0.93
RPGR-210ENST00000494841 CPNE3O75131 537 aaKnown RBP9.27□□□□□ -0.93
RPGR-210ENST00000494841 POLR3DP05423 398 aaPredicted RBP9.27□□□□□ -0.93
RPGR-210ENST00000494841 YBX3P16989 372 aaKnown RBP eCLIP9.27□□□□□ -0.93
RPGR-210ENST00000494841 IGHMBP2P38935 993 aaKnown RBP9.27□□□□□ -0.93
RPGR-210ENST00000494841 MTX1Q13505 466 aa9.27□□□□□ -0.93
RPGR-210ENST00000494841 LRRC24Q50LG9 513 aa9.27□□□□□ -0.93
RPGR-210ENST00000494841 LDHAL6AQ6ZMR3 332 aa9.27□□□□□ -0.93
RPGR-210ENST00000494841 NCAPG2Q86XI2 1143 aa9.27□□□□□ -0.93
RPGR-210ENST00000494841 NPAS4Q8IUM7 802 aa9.27□□□□□ -0.93
RPGR-210ENST00000494841 CEP120Q8N960 986 aa9.27□□□□□ -0.93
RPGR-210ENST00000494841 SSH3Q8TE77 659 aa9.27□□□□□ -0.93
RPGR-210ENST00000494841 CDC5LQ99459 802 aaKnown RBP9.27□□□□□ -0.93
RPGR-210ENST00000494841 MPHOSPH8Q99549 860 aa9.27□□□□□ -0.93
RPGR-210ENST00000494841 DNAJC25Q9H1X3 360 aa9.27□□□□□ -0.93
RPGR-210ENST00000494841 FRRS1LQ9P0K9 344 aa9.27□□□□□ -0.93
RPGR-210ENST00000494841 M0R082 166 aa9.26□□□□□ -0.93
RPGR-210ENST00000494841 P4HBP07237 508 aaKnown RBP9.26□□□□□ -0.93
RPGR-210ENST00000494841 ACPPP15309 386 aa9.26□□□□□ -0.93
RPGR-210ENST00000494841 SNRPNP63162 240 aaKnown RBP9.26□□□□□ -0.93
RPGR-210ENST00000494841 ATP11AP98196 1134 aa9.26□□□□□ -0.93
RPGR-210ENST00000494841 PLCB3Q01970 1234 aa9.26□□□□□ -0.93
RPGR-210ENST00000494841 ENOX2Q16206 610 aaKnown RBP9.26□□□□□ -0.93
RPGR-210ENST00000494841 GPR162Q16538 588 aa9.26□□□□□ -0.93
RPGR-210ENST00000494841 RPAP2Q8IXW5 612 aaPredicted RBP9.26□□□□□ -0.93
RPGR-210ENST00000494841 SP8Q8IXZ3 490 aa9.26□□□□□ -0.93
RPGR-210ENST00000494841 MICALL1Q8N3F8 863 aa9.26□□□□□ -0.93
RPGR-210ENST00000494841 ZNF417Q8TAU3 575 aa9.26□□□□□ -0.93
RPGR-210ENST00000494841 ZNF587Q96SQ5 575 aaPredicted RBP9.26□□□□□ -0.93
RPGR-210ENST00000494841 CNNM1Q9NRU3 951 aa9.26□□□□□ -0.93
RPGR-210ENST00000494841 BSDC1Q9NW68 430 aaPredicted RBP9.26□□□□□ -0.93
RPGR-210ENST00000494841 MINPP1Q9UNW1 487 aa9.26□□□□□ -0.93
RPGR-210ENST00000494841 ATP6V0A2Q9Y487 856 aa9.26□□□□□ -0.93
RPGR-210ENST00000494841 SNAP23O00161 211 aa9.25□□□□□ -0.93
RPGR-210ENST00000494841 TAF5LO75529 589 aa9.25□□□□□ -0.93
RPGR-210ENST00000494841 SURF6O75683 361 aaKnown RBP9.25□□□□□ -0.93
RPGR-210ENST00000494841 GHRHP01286 108 aa9.25□□□□□ -0.93
RPGR-210ENST00000494841 MFAP1P55081 439 aaKnown RBP9.25□□□□□ -0.93
RPGR-210ENST00000494841 GPSM2P81274 684 aa9.25□□□□□ -0.93
RPGR-210ENST00000494841 ELMSAN1Q6PJG2 1045 aa9.25□□□□□ -0.93
RPGR-210ENST00000494841 C8orf86Q6ZUL3 223 aa9.25□□□□□ -0.93
RPGR-210ENST00000494841 ARHGAP27Q6ZUM4 889 aa9.25□□□□□ -0.93
RPGR-210ENST00000494841 ATG9AQ7Z3C6 839 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms