RNA–Protein interactions for RNA: ENST00000494743.1

BRD3-206, Transcript of bromodomain containing 3, humanhuman

TSL 3

Gene BRD3, Length 507 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-206ENST00000494743 ERO1BQ86YB8 467 aa14.02□□□□□ -0.17
BRD3-206ENST00000494743 RGS22Q8NE09 1264 aa14.02□□□□□ -0.17
BRD3-206ENST00000494743 MTMR8Q96EF0 704 aa14.02□□□□□ -0.17
BRD3-206ENST00000494743 UBA5Q9GZZ9 404 aa14.02□□□□□ -0.17
BRD3-206ENST00000494743 GPCPD1Q9NPB8 672 aa14.02□□□□□ -0.17
BRD3-206ENST00000494743 EMILIN3Q9NT22 766 aa14.02□□□□□ -0.17
BRD3-206ENST00000494743 RBM27Q9P2N5 1060 aaKnown RBP14.02□□□□□ -0.17
BRD3-206ENST00000494743 ZDHHC9Q9Y397 364 aa14.02□□□□□ -0.17
BRD3-206ENST00000494743 KIF3AQ9Y496 699 aa14.02□□□□□ -0.17
BRD3-206ENST00000494743 V9GY48 417 aaPredicted RBP14.02□□□□□ -0.17
BRD3-206ENST00000494743 MYH4Q9Y623 1939 aa14.02□□□□□ -0.17
BRD3-206ENST00000494743 PHIPQ8WWQ0 1821 aa14.01□□□□□ -0.17
BRD3-206ENST00000494743 WDR46O15213 610 aaKnown RBP14.01□□□□□ -0.17
BRD3-206ENST00000494743 STX6O43752 255 aa14.01□□□□□ -0.17
BRD3-206ENST00000494743 RAD21O60216 631 aa14.01□□□□□ -0.17
BRD3-206ENST00000494743 PLA2G6O60733 806 aa14.01□□□□□ -0.17
BRD3-206ENST00000494743 VCAM1P19320 739 aa14.01□□□□□ -0.17
BRD3-206ENST00000494743 GRM1Q13255 1194 aa14.01□□□□□ -0.17
BRD3-206ENST00000494743 PFKFB3Q16875 520 aaPredicted RBP14.01□□□□□ -0.17
BRD3-206ENST00000494743 FAM83BQ5T0W9 1011 aa14.01□□□□□ -0.17
BRD3-206ENST00000494743 LARP1BQ659C4 914 aaKnown RBP14.01□□□□□ -0.17
BRD3-206ENST00000494743 SHISA4Q96DD7 197 aa14.01□□□□□ -0.17
BRD3-206ENST00000494743 CAPNS2Q96L46 248 aa14.01□□□□□ -0.17
BRD3-206ENST00000494743 AIFM3Q96NN9 605 aa14.01□□□□□ -0.17
BRD3-206ENST00000494743 ALG1Q9BT22 464 aa14.01□□□□□ -0.17
BRD3-206ENST00000494743 KCNH4Q9UQ05 1017 aa14.01□□□□□ -0.17
BRD3-206ENST00000494743 MTMR6Q9Y217 621 aa14.01□□□□□ -0.17
BRD3-206ENST00000494743 hCG_1642624A0A1W2PR95 340 aa14□□□□□ -0.17
BRD3-206ENST00000494743 C19orf81C9J6K1 198 aa14□□□□□ -0.17
BRD3-206ENST00000494743 PDIA4P13667 645 aaKnown RBP14□□□□□ -0.17
BRD3-206ENST00000494743 SLC16A2P36021 539 aa14□□□□□ -0.17
BRD3-206ENST00000494743 HMGCS2P54868 508 aa14□□□□□ -0.17
BRD3-206ENST00000494743 NUCB2P80303 420 aa14□□□□□ -0.17
BRD3-206ENST00000494743 PPIL2Q13356 520 aa14□□□□□ -0.17
BRD3-206ENST00000494743 ADGRF4Q8IZF3 695 aa14□□□□□ -0.17
BRD3-206ENST00000494743 C2orf69Q8N8R5 385 aa14□□□□□ -0.17
BRD3-206ENST00000494743 WASF1Q92558 559 aa14□□□□□ -0.17
BRD3-206ENST00000494743 OTUD5Q96G74 571 aa14□□□□□ -0.17
BRD3-206ENST00000494743 JMJD4Q9H9V9 463 aa14□□□□□ -0.17
BRD3-206ENST00000494743 A0A0G2JLL6 359 aaPredicted RBP13.99□□□□□ -0.17
BRD3-206ENST00000494743 TMEM232C9JQI7 657 aa13.99□□□□□ -0.17
BRD3-206ENST00000494743 CXCL11O14625 94 aa13.99□□□□□ -0.17
BRD3-206ENST00000494743 IRF6O14896 467 aa13.99□□□□□ -0.17
BRD3-206ENST00000494743 SCG2P13521 617 aa13.99□□□□□ -0.17
BRD3-206ENST00000494743 GJA5P36382 358 aa13.99□□□□□ -0.17
BRD3-206ENST00000494743 STAT2P52630 851 aa13.99□□□□□ -0.17
BRD3-206ENST00000494743 AKAP17AQ02040 695 aaKnown RBP13.99□□□□□ -0.17
BRD3-206ENST00000494743 SYDE2Q5VT97 1194 aa13.99□□□□□ -0.17
BRD3-206ENST00000494743 PRRT2Q7Z6L0 340 aaPredicted RBP13.99□□□□□ -0.17
BRD3-206ENST00000494743 FBXO18Q8NFZ0 1043 aa13.99□□□□□ -0.17
BRD3-206ENST00000494743 OPTNQ96CV9 577 aa13.99□□□□□ -0.17
BRD3-206ENST00000494743 C8orf76Q96K31 380 aa13.99□□□□□ -0.17
BRD3-206ENST00000494743 GJB4Q9NTQ9 266 aa13.99□□□□□ -0.17
BRD3-206ENST00000494743 SOX10P56693 466 aa13.98□□□□□ -0.17
BRD3-206ENST00000494743 CYP4F22Q6NT55 531 aa13.98□□□□□ -0.17
BRD3-206ENST00000494743 FAM160B2Q86V87 743 aa13.98□□□□□ -0.17
BRD3-206ENST00000494743 RRP36Q96EU6 259 aaKnown RBP13.98□□□□□ -0.17
BRD3-206ENST00000494743 PIGSQ96S52 555 aa13.98□□□□□ -0.17
BRD3-206ENST00000494743 FEM1BQ9UK73 627 aa13.98□□□□□ -0.17
BRD3-206ENST00000494743 PRR12Q9ULL5 1215 aa13.98□□□□□ -0.17
BRD3-206ENST00000494743 VPS37CA5D8V6 355 aaPredicted RBP13.97□□□□□ -0.17
BRD3-206ENST00000494743 STXBP3O00186 592 aa13.97□□□□□ -0.17
BRD3-206ENST00000494743 ZBTB5O15062 677 aa13.97□□□□□ -0.17
BRD3-206ENST00000494743 PPP1R11O60927 126 aaPredicted RBP13.97□□□□□ -0.17
BRD3-206ENST00000494743 ZSCAN22P10073 491 aaPredicted RBP13.97□□□□□ -0.17
BRD3-206ENST00000494743 MOGSQ13724 837 aa13.97□□□□□ -0.17
BRD3-206ENST00000494743 WWC2Q6AWC2 1192 aa13.97□□□□□ -0.17
BRD3-206ENST00000494743 OTUD7BQ6GQQ9 843 aa13.97□□□□□ -0.17
BRD3-206ENST00000494743 TYW1BQ6NUM6 668 aa13.97□□□□□ -0.17
BRD3-206ENST00000494743 HOMER1Q86YM7 354 aa13.97□□□□□ -0.17
BRD3-206ENST00000494743 FAM177A1Q8N128 213 aaPredicted RBP13.97□□□□□ -0.17
BRD3-206ENST00000494743 PROCA1Q8NCQ7 364 aaPredicted RBP13.97□□□□□ -0.17
BRD3-206ENST00000494743 CHURC1Q8WUH1 139 aa13.97□□□□□ -0.17
BRD3-206ENST00000494743 PIBF1Q8WXW3 757 aa13.97□□□□□ -0.17
BRD3-206ENST00000494743 SLC10A4Q96EP9 437 aa13.97□□□□□ -0.17
BRD3-206ENST00000494743 RANBP17Q9H2T7 1088 aaKnown RBP13.97□□□□□ -0.17
BRD3-206ENST00000494743 RPAP3Q9H6T3 665 aaPredicted RBP13.97□□□□□ -0.17
BRD3-206ENST00000494743 VAT1LQ9HCJ6 419 aa13.97□□□□□ -0.17
BRD3-206ENST00000494743 SH3GLB2Q9NR46 395 aa13.97□□□□□ -0.17
BRD3-206ENST00000494743 FBXO28Q9NVF7 368 aa13.97□□□□□ -0.17
BRD3-206ENST00000494743 BARHL2Q9NY43 387 aa13.97□□□□□ -0.17
BRD3-206ENST00000494743 TMOD4Q9NZQ9 345 aa13.97□□□□□ -0.17
BRD3-206ENST00000494743 SEC63Q9UGP8 760 aaKnown RBP13.97□□□□□ -0.17
BRD3-206ENST00000494743 ISY1Q9ULR0 285 aaKnown RBP13.97□□□□□ -0.17
BRD3-206ENST00000494743 TRPM7Q96QT4 1865 aa13.97□□□□□ -0.17
BRD3-206ENST00000494743 PNMA6FA0A0J9YX94 578 aa13.96□□□□□ -0.17
BRD3-206ENST00000494743 H3BQV1 296 aa13.96□□□□□ -0.17
BRD3-206ENST00000494743 hCG_1984214I3L0E3 225 aa13.96□□□□□ -0.17
BRD3-206ENST00000494743 FOSBP53539 338 aa13.96□□□□□ -0.17
BRD3-206ENST00000494743 NPY5RQ15761 445 aa13.96□□□□□ -0.17
BRD3-206ENST00000494743 CDC37Q16543 378 aaPredicted RBP13.96□□□□□ -0.17
BRD3-206ENST00000494743 QRICH1Q2TAL8 776 aa13.96□□□□□ -0.17
BRD3-206ENST00000494743 KRT40Q6A162 431 aa13.96□□□□□ -0.17
BRD3-206ENST00000494743 ZNF713Q8N859 430 aaPredicted RBP13.96□□□□□ -0.17
BRD3-206ENST00000494743 GPKOWQ92917 476 aaPredicted RBP eCLIP13.96□□□□□ -0.17
BRD3-206ENST00000494743 WNK4Q96J92 1243 aa13.96□□□□□ -0.17
BRD3-206ENST00000494743 SLF1Q9BQI6 1058 aa13.96□□□□□ -0.17
BRD3-206ENST00000494743 PHF20Q9BVI0 1012 aa13.96□□□□□ -0.17
BRD3-206ENST00000494743 VPS54Q9P1Q0 977 aa13.96□□□□□ -0.17
BRD3-206ENST00000494743 LOC285556D6RIA3 1793 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms