RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 DCAF4Q8WV16 495 aa13.01□□□□□ -0.33
APTX-230ENST00000494649 PIBF1Q8WXW3 757 aa13.01□□□□□ -0.33
APTX-230ENST00000494649 KCNB2Q92953 911 aa13.01□□□□□ -0.33
APTX-230ENST00000494649 CWC22Q9HCG8 908 aaKnown RBP13.01□□□□□ -0.33
APTX-230ENST00000494649 VAT1LQ9HCJ6 419 aa13.01□□□□□ -0.33
APTX-230ENST00000494649 HOMER2Q9NSB8 354 aa13.01□□□□□ -0.33
APTX-230ENST00000494649 FEM1BQ9UK73 627 aa13.01□□□□□ -0.33
APTX-230ENST00000494649 SYNPO2Q9UMS6 1093 aa13.01□□□□□ -0.33
APTX-230ENST00000494649 CTDP1Q9Y5B0 961 aaPredicted RBP13.01□□□□□ -0.33
APTX-230ENST00000494649 CCDC69A6NI79 296 aa13.01□□□□□ -0.33
APTX-230ENST00000494649 DHX16O60231 1041 aaKnown RBP13.01□□□□□ -0.33
APTX-230ENST00000494649 Q6ZUG5 572 aa13.01□□□□□ -0.33
APTX-230ENST00000494649 NCAPG2Q86XI2 1143 aa13.01□□□□□ -0.33
APTX-230ENST00000494649 CMTR1Q8N1G2 835 aaKnown RBP13.01□□□□□ -0.33
APTX-230ENST00000494649 ANKS1AQ92625 1134 aa13.01□□□□□ -0.33
APTX-230ENST00000494649 PRR12Q9ULL5 1215 aa13.01□□□□□ -0.33
APTX-230ENST00000494649 GABRQQ9UN88 632 aa13.01□□□□□ -0.33
APTX-230ENST00000494649 RABGAP1Q9Y3P9 1069 aa13.01□□□□□ -0.33
APTX-230ENST00000494649 PARP14Q460N5 1801 aa13.01□□□□□ -0.33
APTX-230ENST00000494649 COL11A1P12107 1806 aaPredicted RBP13□□□□□ -0.33
APTX-230ENST00000494649 MYCP01106 439 aaPredicted RBP13□□□□□ -0.33
APTX-230ENST00000494649 PARP1P09874 1014 aaKnown RBP13□□□□□ -0.33
APTX-230ENST00000494649 FCGRTP55899 365 aa13□□□□□ -0.33
APTX-230ENST00000494649 EXOSC10Q01780 885 aaKnown RBP13□□□□□ -0.33
APTX-230ENST00000494649 PRKCZQ05513 592 aa13□□□□□ -0.33
APTX-230ENST00000494649 MICU3Q86XE3 530 aa13□□□□□ -0.33
APTX-230ENST00000494649 ZNF654Q8IZM8 581 aa13□□□□□ -0.33
APTX-230ENST00000494649 MOV10L1Q9BXT6 1211 aaKnown RBP13□□□□□ -0.33
APTX-230ENST00000494649 SPATC1LQ9H0A9 340 aa13□□□□□ -0.33
APTX-230ENST00000494649 MORF4L1Q9UBU8 362 aa13□□□□□ -0.33
APTX-230ENST00000494649 RIPK3Q9Y572 518 aa13□□□□□ -0.33
APTX-230ENST00000494649 SNHG28P0DPA3 235 aa13□□□□□ -0.33
APTX-230ENST00000494649 ERCC3P19447 782 aa13□□□□□ -0.33
APTX-230ENST00000494649 RPS6KB1P23443 525 aa13□□□□□ -0.33
APTX-230ENST00000494649 NOM1Q5C9Z4 860 aaKnown RBP13□□□□□ -0.33
APTX-230ENST00000494649 SNRNP48Q6IEG0 339 aaKnown RBP13□□□□□ -0.33
APTX-230ENST00000494649 CTU1Q7Z7A3 348 aaKnown RBP13□□□□□ -0.33
APTX-230ENST00000494649 CATIPQ7Z7H3 387 aa13□□□□□ -0.33
APTX-230ENST00000494649 CCDC82Q8N4S0 544 aa13□□□□□ -0.33
APTX-230ENST00000494649 BRF1Q92994 677 aa13□□□□□ -0.33
APTX-230ENST00000494649 TMEM87BQ96K49 555 aa13□□□□□ -0.33
APTX-230ENST00000494649 AGBL1Q96MI9 1066 aa13□□□□□ -0.33
APTX-230ENST00000494649 ZNF214Q9UL59 606 aaPredicted RBP13□□□□□ -0.33
APTX-230ENST00000494649 BRPF3Q9ULD4 1205 aa13□□□□□ -0.33
APTX-230ENST00000494649 NT5C2P49902 561 aa12.99□□□□□ -0.33
APTX-230ENST00000494649 APOBRQ0VD83 1088 aa12.99□□□□□ -0.33
APTX-230ENST00000494649 TROAPQ12815 778 aa12.99□□□□□ -0.33
APTX-230ENST00000494649 SYDE2Q5VT97 1194 aa12.99□□□□□ -0.33
APTX-230ENST00000494649 NOL8Q76FK4 1167 aaKnown RBP12.99□□□□□ -0.33
APTX-230ENST00000494649 NBPF11Q86T75 865 aa12.99□□□□□ -0.33
APTX-230ENST00000494649 REPS2Q8NFH8 660 aa12.99□□□□□ -0.33
APTX-230ENST00000494649 CHURC1Q8WUH1 139 aa12.99□□□□□ -0.33
APTX-230ENST00000494649 MCOLN1Q9GZU1 580 aa12.99□□□□□ -0.33
APTX-230ENST00000494649 MAD2L2Q9UI95 211 aa12.99□□□□□ -0.33
APTX-230ENST00000494649 ADAMTS5Q9UNA0 930 aa12.99□□□□□ -0.33
APTX-230ENST00000494649 SLC12A7Q9Y666 1083 aa12.99□□□□□ -0.33
APTX-230ENST00000494649 ZBED4O75132 1171 aa12.98□□□□□ -0.33
APTX-230ENST00000494649 PPFIA3O75145 1194 aa12.98□□□□□ -0.33
APTX-230ENST00000494649 PSMA5P28066 241 aa12.98□□□□□ -0.33
APTX-230ENST00000494649 STAT3P40763 770 aa12.98□□□□□ -0.33
APTX-230ENST00000494649 RUFY3Q7L099 469 aa12.98□□□□□ -0.33
APTX-230ENST00000494649 GPR142Q7Z601 462 aa12.98□□□□□ -0.33
APTX-230ENST00000494649 FAM160B2Q86V87 743 aa12.98□□□□□ -0.33
APTX-230ENST00000494649 SLC38A10Q9HBR0 1119 aa12.98□□□□□ -0.33
APTX-230ENST00000494649 PTCH2Q9Y6C5 1203 aa12.98□□□□□ -0.33
APTX-230ENST00000494649 MYPNQ86TC9 1320 aa12.98□□□□□ -0.33
APTX-230ENST00000494649 KLF18A0A0U1RQI7 1052 aa12.98□□□□□ -0.33
APTX-230ENST00000494649 KLRF2D3W0D1 207 aa12.98□□□□□ -0.33
APTX-230ENST00000494649 HMGB1P09429 215 aaKnown RBP12.98□□□□□ -0.33
APTX-230ENST00000494649 FLT3LGP49771 235 aa12.98□□□□□ -0.33
APTX-230ENST00000494649 HOMER1Q86YM7 354 aa12.98□□□□□ -0.33
APTX-230ENST00000494649 ADGRF4Q8IZF3 695 aa12.98□□□□□ -0.33
APTX-230ENST00000494649 MB21D1Q8N884 522 aa12.98□□□□□ -0.33
APTX-230ENST00000494649 GTF3C2Q8WUA4 911 aaPredicted RBP12.98□□□□□ -0.33
APTX-230ENST00000494649 CYP46A1Q9Y6A2 500 aa12.98□□□□□ -0.33
APTX-230ENST00000494649 DOCK3Q8IZD9 2030 aa12.98□□□□□ -0.33
APTX-230ENST00000494649 A0A0G2JMZ2 1700 aa12.98□□□□□ -0.33
APTX-230ENST00000494649 ZNF536O15090 1300 aa12.97□□□□□ -0.33
APTX-230ENST00000494649 EPB41L2O43491 1005 aaKnown RBP12.97□□□□□ -0.33
APTX-230ENST00000494649 DTNBO60941 627 aa12.97□□□□□ -0.33
APTX-230ENST00000494649 PLEKHA8P1O95397 391 aa12.97□□□□□ -0.33
APTX-230ENST00000494649 CYP2B6P20813 491 aa12.97□□□□□ -0.33
APTX-230ENST00000494649 CCNA1P78396 465 aa12.97□□□□□ -0.33
APTX-230ENST00000494649 SLC35G1Q2M3R5 365 aa12.97□□□□□ -0.33
APTX-230ENST00000494649 USH1GQ495M9 461 aa12.97□□□□□ -0.33
APTX-230ENST00000494649 ASPRV1Q53RT3 343 aa12.97□□□□□ -0.33
APTX-230ENST00000494649 GPATCH4Q5T3I0 446 aaKnown RBP12.97□□□□□ -0.33
APTX-230ENST00000494649 COA7Q96BR5 231 aa12.97□□□□□ -0.33
APTX-230ENST00000494649 ZSWIM6Q9HCJ5 1215 aa12.97□□□□□ -0.33
APTX-230ENST00000494649 MGAMO43451 1857 aa12.97□□□□□ -0.33
APTX-230ENST00000494649 hCG_1642624A0A1W2PR95 340 aa12.97□□□□□ -0.33
APTX-230ENST00000494649 ALAS1P13196 640 aa12.97□□□□□ -0.33
APTX-230ENST00000494649 LIFRP42702 1097 aa12.97□□□□□ -0.33
APTX-230ENST00000494649 GRM4Q14833 912 aa12.97□□□□□ -0.33
APTX-230ENST00000494649 APOA5Q6Q788 366 aa12.97□□□□□ -0.33
APTX-230ENST00000494649 CTCFLQ8NI51 663 aaPredicted RBP12.97□□□□□ -0.33
APTX-230ENST00000494649 SH3TC2Q8TF17 1288 aa12.97□□□□□ -0.33
APTX-230ENST00000494649 TEX13BQ9BXU2 312 aa12.97□□□□□ -0.33
APTX-230ENST00000494649 SRRDQ9UH36 339 aa12.97□□□□□ -0.33
APTX-230ENST00000494649 PGK2P07205 417 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms