RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 APPP05067 770 aa15.12■□□□□ 0.01
SKA1-205ENST00000494518 TDO2P48775 406 aa15.12■□□□□ 0.01
SKA1-205ENST00000494518 SHHQ15465 462 aa15.12■□□□□ 0.01
SKA1-205ENST00000494518 ZNF792Q3KQV3 632 aa15.12■□□□□ 0.01
SKA1-205ENST00000494518 SBK1Q52WX2 424 aa15.12■□□□□ 0.01
SKA1-205ENST00000494518 CPXCR1Q8N123 301 aa15.12■□□□□ 0.01
SKA1-205ENST00000494518 LRRC47Q8N1G4 583 aaKnown RBP15.12■□□□□ 0.01
SKA1-205ENST00000494518 APPBP2Q92624 585 aa15.12■□□□□ 0.01
SKA1-205ENST00000494518 CLIP2Q9UDT6 1046 aa15.12■□□□□ 0.01
SKA1-205ENST00000494518 RIPK3Q9Y572 518 aa15.12■□□□□ 0.01
SKA1-205ENST00000494518 ROBO3Q96MS0 1386 aa15.11■□□□□ 0.01
SKA1-205ENST00000494518 MYO9BQ13459 2157 aa15.11■□□□□ 0.01
SKA1-205ENST00000494518 TRIM43BA6NCK2 446 aa15.11■□□□□ 0.01
SKA1-205ENST00000494518 F5H6K3 240 aa15.11■□□□□ 0.01
SKA1-205ENST00000494518 TLE2Q04725 743 aa15.11■□□□□ 0.01
SKA1-205ENST00000494518 KLRC3Q07444 240 aa15.11■□□□□ 0.01
SKA1-205ENST00000494518 MKRN4PQ13434 485 aaPredicted RBP15.11■□□□□ 0.01
SKA1-205ENST00000494518 SNX17Q15036 470 aa15.11■□□□□ 0.01
SKA1-205ENST00000494518 KIFC2Q96AC6 838 aa15.11■□□□□ 0.01
SKA1-205ENST00000494518 TRIM43Q96BQ3 446 aaPredicted RBP15.11■□□□□ 0.01
SKA1-205ENST00000494518 GPATCH3Q96I76 525 aa15.11■□□□□ 0.01
SKA1-205ENST00000494518 GUCD1Q96NT3 240 aa15.11■□□□□ 0.01
SKA1-205ENST00000494518 SEC62Q99442 399 aaKnown RBP15.11■□□□□ 0.01
SKA1-205ENST00000494518 ISY1Q9ULR0 285 aaKnown RBP15.11■□□□□ 0.01
SKA1-205ENST00000494518 PQBP1O60828 265 aaKnown RBP15.1■□□□□ 0.01
SKA1-205ENST00000494518 ZNF865P0CJ78 1059 aaPredicted RBP15.1■□□□□ 0.01
SKA1-205ENST00000494518 RNF180Q86T96 592 aa15.1■□□□□ 0.01
SKA1-205ENST00000494518 CEP95Q96GE4 821 aa15.1■□□□□ 0.01
SKA1-205ENST00000494518 TEX13BQ9BXU2 312 aa15.1■□□□□ 0.01
SKA1-205ENST00000494518 DCTPP1Q9H773 170 aa15.1■□□□□ 0.01
SKA1-205ENST00000494518 RAVER2Q9HCJ3 691 aaKnown RBP15.1■□□□□ 0.01
SKA1-205ENST00000494518 NYAP2Q9P242 653 aa15.1■□□□□ 0.01
SKA1-205ENST00000494518 ZHX1Q9UKY1 873 aaPredicted RBP15.1■□□□□ 0.01
SKA1-205ENST00000494518 PHF24Q9UPV7 400 aa15.1■□□□□ 0.01
SKA1-205ENST00000494518 CTDP1Q9Y5B0 961 aaPredicted RBP15.1■□□□□ 0.01
SKA1-205ENST00000494518 A0A1W2PQ45 241 aaPredicted RBP15.09■□□□□ 0.01
SKA1-205ENST00000494518 A0A1W2PQY0 241 aa15.09■□□□□ 0.01
SKA1-205ENST00000494518 POTEB2H3BUK9 544 aa15.09■□□□□ 0.01
SKA1-205ENST00000494518 AKR1A1P14550 325 aa15.09■□□□□ 0.01
SKA1-205ENST00000494518 ITGB8P26012 769 aa15.09■□□□□ 0.01
SKA1-205ENST00000494518 IRX5P78411 483 aaPredicted RBP15.09■□□□□ 0.01
SKA1-205ENST00000494518 ZNF444Q8N0Y2 327 aaPredicted RBP15.09■□□□□ 0.01
SKA1-205ENST00000494518 OTUD7AQ8TE49 926 aaPredicted RBP15.09■□□□□ 0.01
SKA1-205ENST00000494518 DDX11Q96FC9 970 aa15.09■□□□□ 0.01
SKA1-205ENST00000494518 CNPY2Q9Y2B0 182 aa15.09■□□□□ 0.01
SKA1-205ENST00000494518 DIS3Q9Y2L1 958 aaKnown RBP15.09■□□□□ 0.01
SKA1-205ENST00000494518 PRUNE2Q8WUY3 3088 aa15.08■□□□□ 0.01
SKA1-205ENST00000494518 IGKV6D-41A0A0C4DH26 115 aa15.08■□□□□ 0
SKA1-205ENST00000494518 MYADML2A6NDP7 307 aa15.08■□□□□ 0
SKA1-205ENST00000494518 COPB2P35606 906 aa15.08■□□□□ 0
SKA1-205ENST00000494518 ZNF697Q5TEC3 545 aa15.08■□□□□ 0
SKA1-205ENST00000494518 GIMAP6Q6P9H5 292 aa15.08■□□□□ 0
SKA1-205ENST00000494518 HOMER2Q9NSB8 354 aa15.08■□□□□ 0
SKA1-205ENST00000494518 NRBP1Q9UHY1 535 aa15.08■□□□□ 0
SKA1-205ENST00000494518 SYNRGQ9UMZ2 1314 aa15.08■□□□□ 0
SKA1-205ENST00000494518 ZBED4O75132 1171 aa15.07■□□□□ 0
SKA1-205ENST00000494518 ADAMTS4O75173 837 aa15.07■□□□□ 0
SKA1-205ENST00000494518 SNAI1O95863 264 aaPredicted RBP15.07■□□□□ 0
SKA1-205ENST00000494518 CLTBP09497 229 aa15.07■□□□□ 0
SKA1-205ENST00000494518 IFNL3Q8IZI9 196 aa15.07■□□□□ 0
SKA1-205ENST00000494518 PRPF38AQ8NAV1 312 aaKnown RBP15.07■□□□□ 0
SKA1-205ENST00000494518 FSD1Q9BTV5 496 aa15.07■□□□□ 0
SKA1-205ENST00000494518 MTMR4Q9NYA4 1195 aa15.07■□□□□ 0
SKA1-205ENST00000494518 VCANP13611 3396 aa15.07■□□□□ 0
SKA1-205ENST00000494518 PATL2C9JE40 543 aaKnown RBP15.06■□□□□ 0
SKA1-205ENST00000494518 ADCY6O43306 1168 aa15.06■□□□□ 0
SKA1-205ENST00000494518 ZFYP08048 801 aaPredicted RBP15.06■□□□□ 0
SKA1-205ENST00000494518 GNAT2P19087 354 aa15.06■□□□□ 0
SKA1-205ENST00000494518 EPHB4P54760 987 aa15.06■□□□□ 0
SKA1-205ENST00000494518 C1orf53Q5VUE5 145 aa15.06■□□□□ 0
SKA1-205ENST00000494518 SLFN13Q68D06 897 aa15.06■□□□□ 0
SKA1-205ENST00000494518 FAM109BQ6ICB4 259 aaPredicted RBP15.06■□□□□ 0
SKA1-205ENST00000494518 CCDC129Q6ZRS4 1044 aa15.06■□□□□ 0
SKA1-205ENST00000494518 ANKRD35Q8N283 1001 aa15.06■□□□□ 0
SKA1-205ENST00000494518 SLC38A10Q9HBR0 1119 aa15.06■□□□□ 0
SKA1-205ENST00000494518 PCDHB15Q9Y5E8 787 aa15.06■□□□□ 0
SKA1-205ENST00000494518 LRRC37A2A6NM11 1700 aa15.06■□□□□ 0
SKA1-205ENST00000494518 LCTP09848 1927 aa15.05■□□□□ 0
SKA1-205ENST00000494518 DNAJC25-GNG10A0A024R161 153 aa15.05■□□□□ -0
SKA1-205ENST00000494518 TTLL1O95922 423 aa15.05■□□□□ -0
SKA1-205ENST00000494518 TSPY3P0CV98 308 aa15.05■□□□□ -0
SKA1-205ENST00000494518 TSPY8P0CW00 308 aa15.05■□□□□ -0
SKA1-205ENST00000494518 RAG1P15918 1043 aa15.05■□□□□ -0
SKA1-205ENST00000494518 ACLYP53396 1101 aa15.05■□□□□ -0
SKA1-205ENST00000494518 KCNA10Q16322 511 aa15.05■□□□□ -0
SKA1-205ENST00000494518 RASGRP2Q7LDG7 609 aa15.05■□□□□ -0
SKA1-205ENST00000494518 PI4K2BQ8TCG2 481 aa15.05■□□□□ -0
SKA1-205ENST00000494518 FGD4Q96M96 766 aa15.05■□□□□ -0
SKA1-205ENST00000494518 NAPBQ9H115 298 aa15.05■□□□□ -0
SKA1-205ENST00000494518 INCENPQ9NQS7 918 aa15.05■□□□□ -0
SKA1-205ENST00000494518 STARD7Q9NQZ5 370 aa15.05■□□□□ -0
SKA1-205ENST00000494518 TMEM39AQ9NV64 488 aa15.05■□□□□ -0
SKA1-205ENST00000494518 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.05■□□□□ -0
SKA1-205ENST00000494518 FEM1BQ9UK73 627 aa15.05■□□□□ -0
SKA1-205ENST00000494518 FAM184BQ9ULE4 1060 aa15.05■□□□□ -0
SKA1-205ENST00000494518 MTMR7Q9Y216 660 aa15.05■□□□□ -0
SKA1-205ENST00000494518 TACC3Q9Y6A5 838 aa15.05■□□□□ -0
SKA1-205ENST00000494518 SYNGAP1Q96PV0 1343 aa15.05■□□□□ -0
SKA1-205ENST00000494518 TMEM232C9JQI7 657 aa15.04■□□□□ -0
SKA1-205ENST00000494518 C6orf222P0C671 652 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms