RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 DLGAP5Q15398 846 aa18.89■□□□□ 0.61
ATG4B-225ENST00000494465 PPP4R3BQ5MIZ7 849 aa18.89■□□□□ 0.61
ATG4B-225ENST00000494465 ELOA2Q8IYF1 753 aaPredicted RBP18.89■□□□□ 0.61
ATG4B-225ENST00000494465 C4orf32Q8N8J7 132 aa18.89■□□□□ 0.61
ATG4B-225ENST00000494465 AGBL3Q8NEM8 1001 aa18.89■□□□□ 0.61
ATG4B-225ENST00000494465 KANSL2Q9H9L4 492 aa18.89■□□□□ 0.61
ATG4B-225ENST00000494465 CNTNAP1P78357 1384 aa18.88■□□□□ 0.61
ATG4B-225ENST00000494465 CLRN2A0PK11 232 aa18.88■□□□□ 0.61
ATG4B-225ENST00000494465 NFKBIEO00221 500 aa18.88■□□□□ 0.61
ATG4B-225ENST00000494465 ATP2B2Q01814 1243 aa18.88■□□□□ 0.61
ATG4B-225ENST00000494465 RRP1BQ14684 758 aaKnown RBP18.88■□□□□ 0.61
ATG4B-225ENST00000494465 SEPT2Q15019 361 aa18.88■□□□□ 0.61
ATG4B-225ENST00000494465 SPDYE2Q495Y8 402 aa18.88■□□□□ 0.61
ATG4B-225ENST00000494465 TTBK2Q6IQ55 1244 aa18.88■□□□□ 0.61
ATG4B-225ENST00000494465 OGFOD1Q8N543 542 aa18.88■□□□□ 0.61
ATG4B-225ENST00000494465 CSRNP1Q96S65 589 aa18.88■□□□□ 0.61
ATG4B-225ENST00000494465 TCP10L2B9ZVM9 353 aa18.88■□□□□ 0.61
ATG4B-225ENST00000494465 POLR2DO15514 142 aaKnown RBP18.88■□□□□ 0.61
ATG4B-225ENST00000494465 MDM2Q00987 491 aaPredicted RBP18.88■□□□□ 0.61
ATG4B-225ENST00000494465 TMEM179Q6ZVK1 233 aa18.88■□□□□ 0.61
ATG4B-225ENST00000494465 MTMR14Q8NCE2 650 aa18.88■□□□□ 0.61
ATG4B-225ENST00000494465 CCDC12Q8WUD4 166 aaPredicted RBP18.88■□□□□ 0.61
ATG4B-225ENST00000494465 TRIM34Q9BYJ4 488 aa18.88■□□□□ 0.61
ATG4B-225ENST00000494465 TAOK3Q9H2K8 898 aa18.88■□□□□ 0.61
ATG4B-225ENST00000494465 JMJD4Q9H9V9 463 aa18.88■□□□□ 0.61
ATG4B-225ENST00000494465 SMCO2A6NFE2 343 aa18.87■□□□□ 0.61
ATG4B-225ENST00000494465 MCM7P33993 719 aa18.87■□□□□ 0.61
ATG4B-225ENST00000494465 PNOCQ13519 176 aa18.87■□□□□ 0.61
ATG4B-225ENST00000494465 IL17AQ16552 155 aa18.87■□□□□ 0.61
ATG4B-225ENST00000494465 DPCR1Q3MIW9 517 aa18.87■□□□□ 0.61
ATG4B-225ENST00000494465 GPATCH4Q5T3I0 446 aaKnown RBP18.87■□□□□ 0.61
ATG4B-225ENST00000494465 DHX40Q8IX18 779 aaKnown RBP18.87■□□□□ 0.61
ATG4B-225ENST00000494465 ADGRF4Q8IZF3 695 aa18.87■□□□□ 0.61
ATG4B-225ENST00000494465 CNNM3Q8NE01 707 aa18.87■□□□□ 0.61
ATG4B-225ENST00000494465 CCDC194A0A1B0GVG4 234 aa18.86■□□□□ 0.61
ATG4B-225ENST00000494465 ESYT2A0FGR8 921 aa18.86■□□□□ 0.61
ATG4B-225ENST00000494465 GDF11O95390 407 aa18.86■□□□□ 0.61
ATG4B-225ENST00000494465 ZBED3Q96IU2 234 aaPredicted RBP18.86■□□□□ 0.61
ATG4B-225ENST00000494465 EPSTI1Q96J88 318 aa18.86■□□□□ 0.61
ATG4B-225ENST00000494465 TMOD2Q9NZR1 351 aa18.86■□□□□ 0.61
ATG4B-225ENST00000494465 A0A087X0B3 334 aa18.86■□□□□ 0.61
ATG4B-225ENST00000494465 ESPNB1AK53 854 aa18.86■□□□□ 0.61
ATG4B-225ENST00000494465 hCG_1984214I3L0E3 225 aa18.86■□□□□ 0.61
ATG4B-225ENST00000494465 FOXN1O15353 648 aa18.86■□□□□ 0.61
ATG4B-225ENST00000494465 ACTN4O43707 911 aaKnown RBP18.86■□□□□ 0.61
ATG4B-225ENST00000494465 ABCB5Q2M3G0 1257 aa18.86■□□□□ 0.61
ATG4B-225ENST00000494465 KCTD1Q719H9 257 aa18.86■□□□□ 0.61
ATG4B-225ENST00000494465 ZNF713Q8N859 430 aaPredicted RBP18.86■□□□□ 0.61
ATG4B-225ENST00000494465 FAM151AQ8WW52 585 aa18.86■□□□□ 0.61
ATG4B-225ENST00000494465 MTMR8Q96EF0 704 aa18.86■□□□□ 0.61
ATG4B-225ENST00000494465 NLRP12P59046 1061 aa18.85■□□□□ 0.61
ATG4B-225ENST00000494465 INF2Q27J81 1249 aa18.85■□□□□ 0.61
ATG4B-225ENST00000494465 CEP57L1Q8IYX8 460 aa18.85■□□□□ 0.61
ATG4B-225ENST00000494465 C6orf50Q9HD87 102 aa18.85■□□□□ 0.61
ATG4B-225ENST00000494465 SERTAD1Q9UHV2 236 aa18.85■□□□□ 0.61
ATG4B-225ENST00000494465 BIN1O00499 593 aa18.85■□□□□ 0.61
ATG4B-225ENST00000494465 PPP1R11O60927 126 aaPredicted RBP18.85■□□□□ 0.61
ATG4B-225ENST00000494465 GNA11P29992 359 aa18.85■□□□□ 0.61
ATG4B-225ENST00000494465 PLCB2Q00722 1185 aa18.85■□□□□ 0.61
ATG4B-225ENST00000494465 ICA1Q05084 483 aa18.85■□□□□ 0.61
ATG4B-225ENST00000494465 SYMPKQ92797 1274 aaKnown RBP18.85■□□□□ 0.61
ATG4B-225ENST00000494465 PPP1R1BQ9UD71 204 aaPredicted RBP18.85■□□□□ 0.61
ATG4B-225ENST00000494465 HERC5Q9UII4 1024 aaKnown RBP18.85■□□□□ 0.61
ATG4B-225ENST00000494465 VWA3AA6NCI4 1184 aa18.84■□□□□ 0.61
ATG4B-225ENST00000494465 SLC16A2P36021 539 aa18.84■□□□□ 0.61
ATG4B-225ENST00000494465 CCDC96Q2M329 555 aa18.84■□□□□ 0.61
ATG4B-225ENST00000494465 FKBP1CQ5VVH2 108 aa18.84■□□□□ 0.61
ATG4B-225ENST00000494465 COA7Q96BR5 231 aa18.84■□□□□ 0.61
ATG4B-225ENST00000494465 RTN4Q9NQC3 1192 aaKnown RBP18.84■□□□□ 0.61
ATG4B-225ENST00000494465 CD2APQ9Y5K6 639 aa18.84■□□□□ 0.61
ATG4B-225ENST00000494465 PNMA6FA0A0J9YX94 578 aa18.84■□□□□ 0.61
ATG4B-225ENST00000494465 GH2P01242 217 aa18.84■□□□□ 0.61
ATG4B-225ENST00000494465 ARL6IP4Q66PJ3 421 aaKnown RBP18.84■□□□□ 0.61
ATG4B-225ENST00000494465 CIAPIN1Q6FI81 312 aa18.84■□□□□ 0.61
ATG4B-225ENST00000494465 PDILTQ8N807 584 aa18.84■□□□□ 0.61
ATG4B-225ENST00000494465 DCAF4Q8WV16 495 aa18.84■□□□□ 0.61
ATG4B-225ENST00000494465 BPIFA3Q9BQP9 254 aa18.84■□□□□ 0.61
ATG4B-225ENST00000494465 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.84■□□□□ 0.61
ATG4B-225ENST00000494465 SHTN1A0MZ66 631 aa18.83■□□□□ 0.61
ATG4B-225ENST00000494465 PRKCSHP14314 528 aaPredicted RBP18.83■□□□□ 0.61
ATG4B-225ENST00000494465 PTGER2P43116 358 aa18.83■□□□□ 0.61
ATG4B-225ENST00000494465 SLFN13Q68D06 897 aa18.83■□□□□ 0.61
ATG4B-225ENST00000494465 KRT25Q7Z3Z0 450 aa18.83■□□□□ 0.61
ATG4B-225ENST00000494465 CCDC39Q9UFE4 941 aa18.83■□□□□ 0.61
ATG4B-225ENST00000494465 PCDHA5Q9Y5H7 936 aa18.83■□□□□ 0.61
ATG4B-225ENST00000494465 USP17L10C9JJH3 530 aa18.83■□□□□ 0.6
ATG4B-225ENST00000494465 RBM26Q5T8P6 1007 aaKnown RBP18.83■□□□□ 0.6
ATG4B-225ENST00000494465 CDAN1Q8IWY9 1227 aa18.83■□□□□ 0.6
ATG4B-225ENST00000494465 NAT10Q9H0A0 1025 aaKnown RBP18.83■□□□□ 0.6
ATG4B-225ENST00000494465 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.83■□□□□ 0.6
ATG4B-225ENST00000494465 POSTNQ15063 836 aa18.82■□□□□ 0.6
ATG4B-225ENST00000494465 ZSCAN30Q86W11 494 aa18.82■□□□□ 0.6
ATG4B-225ENST00000494465 GMCL1P1Q8NEA9 526 aa18.82■□□□□ 0.6
ATG4B-225ENST00000494465 JDP2Q8WYK2 163 aa18.82■□□□□ 0.6
ATG4B-225ENST00000494465 TMEM60Q9H2L4 133 aa18.82■□□□□ 0.6
ATG4B-225ENST00000494465 PGAP2Q9UHJ9 254 aa18.82■□□□□ 0.6
ATG4B-225ENST00000494465 WNT10BO00744 389 aa18.82■□□□□ 0.6
ATG4B-225ENST00000494465 PRR29P0C7W0 189 aa18.82■□□□□ 0.6
ATG4B-225ENST00000494465 SLC1A4P43007 532 aa18.82■□□□□ 0.6
ATG4B-225ENST00000494465 NT5DC1Q5TFE4 455 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms