RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 SEMA6BQ9H3T3 888 aa5.67□□□□□ -1.5
CMSS1-207ENST00000494412 AKT3Q9Y243 479 aa5.67□□□□□ -1.5
CMSS1-207ENST00000494412 WASHC2CQ9Y4E1 1318 aa5.67□□□□□ -1.5
CMSS1-207ENST00000494412 CCDC194A0A1B0GVG4 234 aa5.66□□□□□ -1.5
CMSS1-207ENST00000494412 MEGF11A6BM72 1044 aa5.66□□□□□ -1.5
CMSS1-207ENST00000494412 OPA1O60313 960 aa5.66□□□□□ -1.5
CMSS1-207ENST00000494412 ALDH1L1O75891 902 aa5.66□□□□□ -1.5
CMSS1-207ENST00000494412 KCNH1O95259 989 aa5.66□□□□□ -1.5
CMSS1-207ENST00000494412 ITGB7P26010 798 aa5.66□□□□□ -1.5
CMSS1-207ENST00000494412 NEK4P51957 841 aa5.66□□□□□ -1.5
CMSS1-207ENST00000494412 RNF4P78317 190 aa5.66□□□□□ -1.5
CMSS1-207ENST00000494412 SOX4Q06945 474 aaPredicted RBP5.66□□□□□ -1.5
CMSS1-207ENST00000494412 AUHQ13825 339 aaKnown RBP5.66□□□□□ -1.5
CMSS1-207ENST00000494412 NBPF12Q5TAG4 269 aaPredicted RBP5.66□□□□□ -1.5
CMSS1-207ENST00000494412 POMZP3Q6PJE2 187 aa5.66□□□□□ -1.5
CMSS1-207ENST00000494412 ARMCX6Q7L4S7 300 aa5.66□□□□□ -1.5
CMSS1-207ENST00000494412 TRIM59Q8IWR1 403 aa5.66□□□□□ -1.5
CMSS1-207ENST00000494412 SMYD4Q8IYR2 804 aaPredicted RBP5.66□□□□□ -1.5
CMSS1-207ENST00000494412 AHI1Q8N157 1196 aa5.66□□□□□ -1.5
CMSS1-207ENST00000494412 ARMC10Q8N2F6 343 aa5.66□□□□□ -1.5
CMSS1-207ENST00000494412 CRACR2BQ8N4Y2 399 aaPredicted RBP5.66□□□□□ -1.5
CMSS1-207ENST00000494412 C12orf50Q8NA57 414 aaPredicted RBP5.66□□□□□ -1.5
CMSS1-207ENST00000494412 SMG8Q8ND04 991 aaKnown RBP5.66□□□□□ -1.5
CMSS1-207ENST00000494412 FAM46AQ96IP4 442 aaKnown RBP5.66□□□□□ -1.5
CMSS1-207ENST00000494412 MRGPRX3Q96LB0 322 aa5.66□□□□□ -1.5
CMSS1-207ENST00000494412 SLC52A2Q9HAB3 445 aa5.66□□□□□ -1.5
CMSS1-207ENST00000494412 TRIM39Q9HCM9 518 aa5.66□□□□□ -1.5
CMSS1-207ENST00000494412 GP6Q9HCN6 339 aa5.66□□□□□ -1.5
CMSS1-207ENST00000494412 FBXL21Q9UKT6 434 aa5.66□□□□□ -1.5
CMSS1-207ENST00000494412 BLACEA4D250 179 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 DYRK3O43781 588 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 DLX3O60479 287 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 KATNA1O75449 491 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 C6orf222P0C671 652 aaPredicted RBP5.65□□□□□ -1.5
CMSS1-207ENST00000494412 KCNJ6P48051 423 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 GABREP78334 506 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 ZNF460Q14592 562 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 PPP2R5DQ14738 602 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 TTF1Q15361 905 aaPredicted RBP5.65□□□□□ -1.5
CMSS1-207ENST00000494412 ANKRD39Q53RE8 183 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 TRIM61Q5EBN2 209 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 NOL9Q5SY16 702 aaKnown RBP5.65□□□□□ -1.5
CMSS1-207ENST00000494412 FDX2Q6P4F2 183 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 PKN3Q6P5Z2 889 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 CERS3Q8IU89 383 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 WDR75Q8IWA0 830 aaKnown RBP5.65□□□□□ -1.5
CMSS1-207ENST00000494412 CCDC146Q8IYE0 955 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 PPP1R13LQ8WUF5 828 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 BRF1Q92994 677 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 TSR2Q969E8 191 aaKnown RBP5.65□□□□□ -1.5
CMSS1-207ENST00000494412 KREMEN1Q96MU8 473 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 MIPEPQ99797 713 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 CEP41Q9BYV8 373 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 SUGCTQ9HAC7 445 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 CGGBP1Q9UFW8 167 aaPredicted RBP5.65□□□□□ -1.5
CMSS1-207ENST00000494412 CEP131Q9UPN4 1083 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 EMC9Q9Y3B6 208 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 TNPO3Q9Y5L0 923 aaKnown RBP5.65□□□□□ -1.5
CMSS1-207ENST00000494412 ACTL7BQ9Y614 415 aa5.65□□□□□ -1.5
CMSS1-207ENST00000494412 SHOXO15266 292 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 SART1O43290 800 aaKnown RBP5.64□□□□□ -1.51
CMSS1-207ENST00000494412 KPNA6O60684 536 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 EFCAB14O75071 495 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 ADAM23O75077 832 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 LRIG2O94898 1065 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 TIAF1O95411 115 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 CAPNS1P04632 268 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 EPHB1P54762 984 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 TBX4P57082 545 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 PCBP1Q15365 356 aaKnown RBP eCLIP5.64□□□□□ -1.51
CMSS1-207ENST00000494412 SF1Q15637 639 aaKnown RBP5.64□□□□□ -1.51
CMSS1-207ENST00000494412 ANKRD34AQ69YU3 496 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 GTF2IRD2BQ6EKJ0 949 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 PRR23CQ6ZRP0 262 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 FGD2Q7Z6J4 655 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 CDH24Q86UP0 819 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 GTF2IRD2Q86UP8 949 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 MFSD2AQ8NA29 543 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 WDR66Q8TBY9 1149 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 KCTD13Q8WZ19 329 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 UTP4Q969X6 686 aaKnown RBP5.64□□□□□ -1.51
CMSS1-207ENST00000494412 RCC1LQ96I51 464 aaKnown RBP5.64□□□□□ -1.51
CMSS1-207ENST00000494412 PSMD1Q99460 953 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 SMAD5Q99717 465 aaKnown RBP5.64□□□□□ -1.51
CMSS1-207ENST00000494412 NOL6Q9H6R4 1146 aaKnown RBP5.64□□□□□ -1.51
CMSS1-207ENST00000494412 FAM105AQ9NUU6 356 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 PCDHB12Q9Y5F1 795 aa5.64□□□□□ -1.51
CMSS1-207ENST00000494412 FAM83GA6ND36 823 aa5.63□□□□□ -1.51
CMSS1-207ENST00000494412 PRC1O43663 620 aa5.63□□□□□ -1.51
CMSS1-207ENST00000494412 PEX14O75381 377 aa5.63□□□□□ -1.51
CMSS1-207ENST00000494412 RASGRP1O95267 797 aa5.63□□□□□ -1.51
CMSS1-207ENST00000494412 EYA4O95677 639 aa5.63□□□□□ -1.51
CMSS1-207ENST00000494412 ASLP04424 464 aa5.63□□□□□ -1.51
CMSS1-207ENST00000494412 SNRPB2P08579 225 aaKnown RBP5.63□□□□□ -1.51
CMSS1-207ENST00000494412 RAB6AP20340 208 aa5.63□□□□□ -1.51
CMSS1-207ENST00000494412 ZNF445P59923 1031 aa5.63□□□□□ -1.51
CMSS1-207ENST00000494412 LETMD1Q6P1Q0 360 aa5.63□□□□□ -1.51
CMSS1-207ENST00000494412 ARHGEF39Q8N4T4 335 aa5.63□□□□□ -1.51
CMSS1-207ENST00000494412 C2CD4AQ8NCU7 369 aaPredicted RBP5.63□□□□□ -1.51
CMSS1-207ENST00000494412 GSTCDQ8NEC7 633 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms