RNA–Protein interactions for RNA: ENST00000494297.5

SRPRB-205, Transcript of SRP receptor subunit beta, humanhuman

TSL 2

Gene SRPRB, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-205ENST00000494297 SLC27A2O14975 620 aa6.33□□□□□ -1.4
SRPRB-205ENST00000494297 EIF5BO60841 1220 aaKnown RBP6.33□□□□□ -1.4
SRPRB-205ENST00000494297 REC8O95072 547 aa6.33□□□□□ -1.4
SRPRB-205ENST00000494297 NDUFB10O96000 172 aa6.33□□□□□ -1.4
SRPRB-205ENST00000494297 TOP1P11387 765 aaKnown RBP6.33□□□□□ -1.4
SRPRB-205ENST00000494297 PSEN2P49810 448 aa6.33□□□□□ -1.4
SRPRB-205ENST00000494297 LACTBP83111 547 aaPredicted RBP6.33□□□□□ -1.4
SRPRB-205ENST00000494297 KIF22Q14807 665 aa6.33□□□□□ -1.4
SRPRB-205ENST00000494297 Q3C1V9 767 aa6.33□□□□□ -1.4
SRPRB-205ENST00000494297 RNF20Q5VTR2 975 aa6.33□□□□□ -1.4
SRPRB-205ENST00000494297 SLFN13Q68D06 897 aa6.33□□□□□ -1.4
SRPRB-205ENST00000494297 CYB5R4Q7L1T6 521 aa6.33□□□□□ -1.4
SRPRB-205ENST00000494297 CTU1Q7Z7A3 348 aaKnown RBP6.33□□□□□ -1.4
SRPRB-205ENST00000494297 SPICE1Q8N0Z3 855 aa6.33□□□□□ -1.4
SRPRB-205ENST00000494297 ANKRD13CQ8N6S4 541 aa6.33□□□□□ -1.4
SRPRB-205ENST00000494297 GPRC5AQ8NFJ5 357 aa6.33□□□□□ -1.4
SRPRB-205ENST00000494297 ZSCAN10Q96SZ4 725 aaPredicted RBP6.33□□□□□ -1.4
SRPRB-205ENST00000494297 TMEM47Q9BQJ4 181 aa6.33□□□□□ -1.4
SRPRB-205ENST00000494297 GPHNQ9NQX3 736 aaPredicted RBP6.33□□□□□ -1.4
SRPRB-205ENST00000494297 TAF6LQ9Y6J9 622 aa6.33□□□□□ -1.4
SRPRB-205ENST00000494297 LOC285556D6RIA3 1793 aa6.33□□□□□ -1.4
SRPRB-205ENST00000494297 GREB1LQ9C091 1923 aaPredicted RBP6.33□□□□□ -1.4
SRPRB-205ENST00000494297 SPDYE16A6NNV3 312 aaPredicted RBP6.32□□□□□ -1.4
SRPRB-205ENST00000494297 CNMDO75829 334 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 FLOT1O75955 427 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 SNHG28P0DPA3 235 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 FDX1P10109 184 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 BMP3P12645 472 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 HOXD10P28358 340 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 CTGFP29279 349 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 HSPA4P34932 840 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 PRMT2P55345 433 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 ERVK-9P63128 1117 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 ERVK-24P63145 666 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 FOXK1P85037 733 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 CAP1Q01518 475 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 SEC23AQ15436 765 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 FAM83BQ5T0W9 1011 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 ADGRD1Q6QNK2 874 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 STOX1Q6ZVD7 989 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 OTOP1Q7RTM1 612 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 RALYLQ86SE5 291 aaKnown RBP6.32□□□□□ -1.4
SRPRB-205ENST00000494297 MB21D2Q8IYB1 491 aaPredicted RBP6.32□□□□□ -1.4
SRPRB-205ENST00000494297 LRRC47Q8N1G4 583 aaKnown RBP6.32□□□□□ -1.4
SRPRB-205ENST00000494297 TMTC2Q8N394 836 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 MB21D1Q8N884 522 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 ENAHQ8N8S7 591 aaPredicted RBP6.32□□□□□ -1.4
SRPRB-205ENST00000494297 PRPF38AQ8NAV1 312 aaKnown RBP6.32□□□□□ -1.4
SRPRB-205ENST00000494297 CD99L2Q8TCZ2 262 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 IGDCC4Q8TDY8 1250 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 CHURC1Q8WUH1 139 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 DCAF4Q8WV16 495 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 ZKSCAN3Q9BRR0 538 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 USP26Q9BXU7 913 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 TANGO6Q9C0B7 1094 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 TXNRD2Q9NNW7 524 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 BTBD7Q9P203 1132 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 FEM1BQ9UK73 627 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 PPP1R9AQ9ULJ8 1098 aa6.32□□□□□ -1.4
SRPRB-205ENST00000494297 TNKSO95271 1327 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 ERICH2A1L162 156 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 VWA5AO00534 786 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 ATP2A1O14983 1001 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 FMNL1O95466 1100 aaPredicted RBP6.31□□□□□ -1.4
SRPRB-205ENST00000494297 HMGB1P09429 215 aaKnown RBP6.31□□□□□ -1.4
SRPRB-205ENST00000494297 PDHBP11177 359 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 ZKSCAN1P17029 563 aaPredicted RBP6.31□□□□□ -1.4
SRPRB-205ENST00000494297 MCCP23508 829 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 MAPK4P31152 587 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 MCM5P33992 734 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 SLC1A4P43007 532 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 PSMC4P43686 418 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 STAT2P52630 851 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 FCGRTP55899 365 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 EXOSC10Q01780 885 aaKnown RBP6.31□□□□□ -1.4
SRPRB-205ENST00000494297 KRT32Q14532 448 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 SART3Q15020 963 aaKnown RBP6.31□□□□□ -1.4
SRPRB-205ENST00000494297 IFIT1BQ5T764 474 aaKnown RBP6.31□□□□□ -1.4
SRPRB-205ENST00000494297 BTNL9Q6UXG8 535 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 FAM160B2Q86V87 743 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 PNMA1Q8ND90 353 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 REPS2Q8NFH8 660 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 TMEM87BQ96K49 555 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 TRIM47Q96LD4 638 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 NEK1Q96PY6 1258 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 KCNK17Q96T54 332 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 NUP88Q99567 741 aaPredicted RBP6.31□□□□□ -1.4
SRPRB-205ENST00000494297 SLF1Q9BQI6 1058 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 UBAC1Q9BSL1 405 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 ARHGAP39Q9C0H5 1083 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 KAT14Q9H8E8 782 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 EFCC1Q9HA90 598 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 FBXO28Q9NVF7 368 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 GJD2Q9UKL4 321 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 PTPN22Q9Y2R2 807 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 TRIM17Q9Y577 477 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 PCNTO95613 3336 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 PTPRFP10586 1907 aa6.31□□□□□ -1.4
SRPRB-205ENST00000494297 WDR19Q8NEZ3 1342 aa6.3□□□□□ -1.4
SRPRB-205ENST00000494297 TMEM232C9JQI7 657 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms