RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-211	ENST00000493957	FCGRT	P55899	365 aa		13.73	□□□□□ -0.21
UBA3-211	ENST00000493957	PRKCZ	Q05513	592 aa		13.73	□□□□□ -0.21
UBA3-211	ENST00000493957	NECTIN1	Q15223	517 aa		13.73	□□□□□ -0.21
UBA3-211	ENST00000493957	CREB3L3	Q68CJ9	461 aa		13.73	□□□□□ -0.21
UBA3-211	ENST00000493957	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.73	□□□□□ -0.21
UBA3-211	ENST00000493957	CHST3	Q7LGC8	479 aa		13.73	□□□□□ -0.21
UBA3-211	ENST00000493957	ENAH	Q8N8S7	591 aa	Predicted RBP	13.73	□□□□□ -0.21
UBA3-211	ENST00000493957	GPRC5A	Q8NFJ5	357 aa		13.73	□□□□□ -0.21
UBA3-211	ENST00000493957	SRRD	Q9UH36	339 aa		13.73	□□□□□ -0.21
UBA3-211	ENST00000493957	PPP1R9A	Q9ULJ8	1098 aa		13.73	□□□□□ -0.21
UBA3-211	ENST00000493957	SYNPO2	Q9UMS6	1093 aa		13.73	□□□□□ -0.21
UBA3-211	ENST00000493957	RABGAP1	Q9Y3P9	1069 aa		13.73	□□□□□ -0.21
UBA3-211	ENST00000493957	ZNF236	Q9UL36	1845 aa		13.73	□□□□□ -0.21
UBA3-211	ENST00000493957	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.73	□□□□□ -0.21
UBA3-211	ENST00000493957	TNKS	O95271	1327 aa		13.72	□□□□□ -0.21
UBA3-211	ENST00000493957	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.72	□□□□□ -0.21
UBA3-211	ENST00000493957	MYPN	Q86TC9	1320 aa		13.72	□□□□□ -0.21
UBA3-211	ENST00000493957	TOP1	P11387	765 aa	Known RBP	13.72	□□□□□ -0.21
UBA3-211	ENST00000493957	ANTXR2	P58335	489 aa		13.72	□□□□□ -0.21
UBA3-211	ENST00000493957	CASC1	Q6TDU7	716 aa		13.72	□□□□□ -0.21
UBA3-211	ENST00000493957	KCTD1	Q719H9	257 aa		13.72	□□□□□ -0.21
UBA3-211	ENST00000493957	REPS2	Q8NFH8	660 aa		13.72	□□□□□ -0.21
UBA3-211	ENST00000493957	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.72	□□□□□ -0.21
UBA3-211	ENST00000493957	KRT23	Q9C075	422 aa		13.72	□□□□□ -0.21
UBA3-211	ENST00000493957	CNNM2	Q9H8M5	875 aa		13.72	□□□□□ -0.21
UBA3-211	ENST00000493957	SENP2	Q9HC62	589 aa		13.72	□□□□□ -0.21
UBA3-211	ENST00000493957	ISY1	Q9ULR0	285 aa	Known RBP	13.72	□□□□□ -0.21
UBA3-211	ENST00000493957	ADAMTS5	Q9UNA0	930 aa		13.72	□□□□□ -0.21
UBA3-211	ENST00000493957	BMP3	P12645	472 aa		13.71	□□□□□ -0.21
UBA3-211	ENST00000493957	SLC1A4	P43007	532 aa		13.71	□□□□□ -0.21
UBA3-211	ENST00000493957	SNAP25	P60880	206 aa		13.71	□□□□□ -0.21
UBA3-211	ENST00000493957	TMEM132B	Q14DG7	1078 aa		13.71	□□□□□ -0.21
UBA3-211	ENST00000493957	SEC23A	Q15436	765 aa		13.71	□□□□□ -0.21
UBA3-211	ENST00000493957	PKN2	Q16513	984 aa	Known RBP	13.71	□□□□□ -0.21
UBA3-211	ENST00000493957	TTBK2	Q6IQ55	1244 aa		13.71	□□□□□ -0.21
UBA3-211	ENST00000493957	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.71	□□□□□ -0.21
UBA3-211	ENST00000493957	GTF3C2	Q8WUA4	911 aa	Predicted RBP	13.71	□□□□□ -0.21
UBA3-211	ENST00000493957	KIFC2	Q96AC6	838 aa		13.71	□□□□□ -0.21
UBA3-211	ENST00000493957	GMCL1	Q96IK5	515 aa		13.71	□□□□□ -0.21
UBA3-211	ENST00000493957	SLF1	Q9BQI6	1058 aa		13.71	□□□□□ -0.21
UBA3-211	ENST00000493957	MOV10L1	Q9BXT6	1211 aa	Known RBP	13.71	□□□□□ -0.21
UBA3-211	ENST00000493957	GPHN	Q9NQX3	736 aa	Predicted RBP	13.71	□□□□□ -0.21
UBA3-211	ENST00000493957	HOXC10	Q9NYD6	342 aa		13.71	□□□□□ -0.21
UBA3-211	ENST00000493957	FRMPD3	Q5JV73	1810 aa		13.7	□□□□□ -0.22
UBA3-211	ENST00000493957	TMEM232	C9JQI7	657 aa		13.7	□□□□□ -0.22
UBA3-211	ENST00000493957	VWA5A	O00534	786 aa		13.7	□□□□□ -0.22
UBA3-211	ENST00000493957	TAL1	P17542	331 aa	Predicted RBP	13.7	□□□□□ -0.22
UBA3-211	ENST00000493957	FLT3LG	P49771	235 aa		13.7	□□□□□ -0.22
UBA3-211	ENST00000493957	PLS1	Q14651	629 aa		13.7	□□□□□ -0.22
UBA3-211	ENST00000493957	CCDC96	Q2M329	555 aa		13.7	□□□□□ -0.22
UBA3-211	ENST00000493957	PPP4R3B	Q5MIZ7	849 aa		13.7	□□□□□ -0.22
UBA3-211	ENST00000493957	IQCA1	Q86XH1	822 aa		13.7	□□□□□ -0.22
UBA3-211	ENST00000493957	NCOA7	Q8NI08	942 aa		13.7	□□□□□ -0.22
UBA3-211	ENST00000493957	SH3TC2	Q8TF17	1288 aa		13.7	□□□□□ -0.22
UBA3-211	ENST00000493957	SPATC1L	Q9H0A9	340 aa		13.7	□□□□□ -0.22
UBA3-211	ENST00000493957	GPCPD1	Q9NPB8	672 aa		13.7	□□□□□ -0.22
UBA3-211	ENST00000493957	FEM1B	Q9UK73	627 aa		13.7	□□□□□ -0.22
UBA3-211	ENST00000493957	GJD2	Q9UKL4	321 aa		13.7	□□□□□ -0.22
UBA3-211	ENST00000493957	POTEB3	A0JP26	581 aa		13.69	□□□□□ -0.22
UBA3-211	ENST00000493957	GNRH1	P01148	92 aa		13.69	□□□□□ -0.22
UBA3-211	ENST00000493957	PDHB	P11177	359 aa		13.69	□□□□□ -0.22
UBA3-211	ENST00000493957	SLC16A2	P36021	539 aa		13.69	□□□□□ -0.22
UBA3-211	ENST00000493957	TRDN	Q13061	729 aa		13.69	□□□□□ -0.22
UBA3-211	ENST00000493957	ARHGEF6	Q15052	776 aa		13.69	□□□□□ -0.22
UBA3-211	ENST00000493957	WDR78	Q5VTH9	848 aa		13.69	□□□□□ -0.22
UBA3-211	ENST00000493957	POTEB	Q6S5H4	581 aa		13.69	□□□□□ -0.22
UBA3-211	ENST00000493957	GPR142	Q7Z601	462 aa		13.69	□□□□□ -0.22
UBA3-211	ENST00000493957	RALYL	Q86SE5	291 aa	Known RBP	13.69	□□□□□ -0.22
UBA3-211	ENST00000493957	DGKH	Q86XP1	1220 aa		13.69	□□□□□ -0.22
UBA3-211	ENST00000493957	PNMA1	Q8ND90	353 aa		13.69	□□□□□ -0.22
UBA3-211	ENST00000493957	DCAF4	Q8WV16	495 aa		13.69	□□□□□ -0.22
UBA3-211	ENST00000493957	ANKS1A	Q92625	1134 aa		13.69	□□□□□ -0.22
UBA3-211	ENST00000493957	TTC14	Q96N46	770 aa		13.69	□□□□□ -0.22
UBA3-211	ENST00000493957	UBAC1	Q9BSL1	405 aa		13.69	□□□□□ -0.22
UBA3-211	ENST00000493957	CPVL	Q9H3G5	476 aa		13.69	□□□□□ -0.22
UBA3-211	ENST00000493957	ZNF214	Q9UL59	606 aa	Predicted RBP	13.69	□□□□□ -0.22
UBA3-211	ENST00000493957	CCDC85C	A6NKD9	419 aa		13.68	□□□□□ -0.22
UBA3-211	ENST00000493957	MYC	P01106	439 aa	Predicted RBP	13.68	□□□□□ -0.22
UBA3-211	ENST00000493957	GOLGA8H	P0CJ92	632 aa		13.68	□□□□□ -0.22
UBA3-211	ENST00000493957	SNHG28	P0DPA3	235 aa		13.68	□□□□□ -0.22
UBA3-211	ENST00000493957	ELN	P15502	786 aa		13.68	□□□□□ -0.22
UBA3-211	ENST00000493957	ERCC3	P19447	782 aa		13.68	□□□□□ -0.22
UBA3-211	ENST00000493957	MAPK4	P31152	587 aa		13.68	□□□□□ -0.22
UBA3-211	ENST00000493957	STAT2	P52630	851 aa		13.68	□□□□□ -0.22
UBA3-211	ENST00000493957	IK	Q13123	557 aa	Predicted RBP	13.68	□□□□□ -0.22
UBA3-211	ENST00000493957	ADCK5	Q3MIX3	580 aa		13.68	□□□□□ -0.22
UBA3-211	ENST00000493957	PLEKHH3	Q7Z736	793 aa		13.68	□□□□□ -0.22
UBA3-211	ENST00000493957	MB21D1	Q8N884	522 aa		13.68	□□□□□ -0.22
UBA3-211	ENST00000493957	PRPF38A	Q8NAV1	312 aa	Known RBP	13.68	□□□□□ -0.22
UBA3-211	ENST00000493957	RAET1E	Q8TD07	263 aa		13.68	□□□□□ -0.22
UBA3-211	ENST00000493957	COA7	Q96BR5	231 aa		13.68	□□□□□ -0.22
UBA3-211	ENST00000493957	HS3ST6	Q96QI5	342 aa		13.68	□□□□□ -0.22
UBA3-211	ENST00000493957	RAVER2	Q9HCJ3	691 aa	Known RBP	13.68	□□□□□ -0.22
UBA3-211	ENST00000493957	RIPK3	Q9Y572	518 aa		13.68	□□□□□ -0.22
UBA3-211	ENST00000493957	IFIT3	O14879	490 aa	Known RBP	13.67	□□□□□ -0.22
UBA3-211	ENST00000493957	HOXD10	P28358	340 aa		13.67	□□□□□ -0.22
UBA3-211	ENST00000493957	ZNF543	Q08ER8	600 aa		13.67	□□□□□ -0.22
UBA3-211	ENST00000493957	MORN1	Q5T089	497 aa		13.67	□□□□□ -0.22
UBA3-211	ENST00000493957	IFIT1B	Q5T764	474 aa	Known RBP	13.67	□□□□□ -0.22
UBA3-211	ENST00000493957	NCAPG2	Q86XI2	1143 aa		13.67	□□□□□ -0.22

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