RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ZDHHC14Q8IZN3 488 aa7.69□□□□□ -1.18
SMC4-223ENST00000493695 LINC00116Q8NCU8 138 aa7.69□□□□□ -1.18
SMC4-223ENST00000493695 KCNC2Q96PR1 638 aa7.69□□□□□ -1.18
SMC4-223ENST00000493695 PLCD4Q9BRC7 762 aa7.69□□□□□ -1.18
SMC4-223ENST00000493695 KRTAP17-1Q9BYP8 105 aa7.69□□□□□ -1.18
SMC4-223ENST00000493695 PRDM14Q9GZV8 571 aa7.69□□□□□ -1.18
SMC4-223ENST00000493695 COPRSQ9NQ92 184 aa7.69□□□□□ -1.18
SMC4-223ENST00000493695 A0A1W2PQ27 194 aa7.68□□□□□ -1.18
SMC4-223ENST00000493695 A0A1W2PQ64 194 aa7.68□□□□□ -1.18
SMC4-223ENST00000493695 A0A1W2PQC6 194 aa7.68□□□□□ -1.18
SMC4-223ENST00000493695 A0A1W2PQD8 194 aa7.68□□□□□ -1.18
SMC4-223ENST00000493695 NUDT19A8MXV4 375 aa7.68□□□□□ -1.18
SMC4-223ENST00000493695 N4BP3O15049 544 aa7.68□□□□□ -1.18
SMC4-223ENST00000493695 SYN1P17600 705 aa7.68□□□□□ -1.18
SMC4-223ENST00000493695 EIF4A3P38919 411 aaKnown RBP7.68□□□□□ -1.18
SMC4-223ENST00000493695 RAD51AP2Q09MP3 1159 aa7.68□□□□□ -1.18
SMC4-223ENST00000493695 KIR3DS1Q14943 382 aa7.68□□□□□ -1.18
SMC4-223ENST00000493695 RAB3GAP1Q15042 981 aa7.68□□□□□ -1.18
SMC4-223ENST00000493695 GALNT18Q6P9A2 607 aa7.68□□□□□ -1.18
SMC4-223ENST00000493695 GK5Q6ZS86 529 aa7.68□□□□□ -1.18
SMC4-223ENST00000493695 CNTD2Q9H8S5 307 aa7.68□□□□□ -1.18
SMC4-223ENST00000493695 CHST7Q9NS84 486 aa7.68□□□□□ -1.18
SMC4-223ENST00000493695 GPR55Q9Y2T6 319 aaPredicted RBP7.68□□□□□ -1.18
SMC4-223ENST00000493695 ZNF281Q9Y2X9 895 aa7.68□□□□□ -1.18
SMC4-223ENST00000493695 ABLIM1O14639 778 aa7.67□□□□□ -1.18
SMC4-223ENST00000493695 SIGLEC6O43699 453 aa7.67□□□□□ -1.18
SMC4-223ENST00000493695 PRKCAP17252 672 aa7.67□□□□□ -1.18
SMC4-223ENST00000493695 BBS9Q3SYG4 887 aa7.67□□□□□ -1.18
SMC4-223ENST00000493695 SEZ6Q53EL9 994 aa7.67□□□□□ -1.18
SMC4-223ENST00000493695 LCE5AQ5TCM9 118 aa7.67□□□□□ -1.18
SMC4-223ENST00000493695 CNKSR3Q6P9H4 555 aa7.67□□□□□ -1.18
SMC4-223ENST00000493695 TMC6Q7Z403 805 aa7.67□□□□□ -1.18
SMC4-223ENST00000493695 FCRL2Q96LA5 508 aaPredicted RBP7.67□□□□□ -1.18
SMC4-223ENST00000493695 TNFRSF10DQ9UBN6 386 aa7.67□□□□□ -1.18
SMC4-223ENST00000493695 FAM86C2PA6NEL3 165 aa7.66□□□□□ -1.18
SMC4-223ENST00000493695 WTIPA6NIX2 430 aaPredicted RBP7.66□□□□□ -1.18
SMC4-223ENST00000493695 CYP4F8P98187 520 aa7.66□□□□□ -1.18
SMC4-223ENST00000493695 DNAJC14Q6Y2X3 702 aaPredicted RBP7.66□□□□□ -1.18
SMC4-223ENST00000493695 NLRC3Q7RTR2 1065 aa7.66□□□□□ -1.18
SMC4-223ENST00000493695 FBXO33Q7Z6M2 555 aa7.66□□□□□ -1.18
SMC4-223ENST00000493695 NUP43Q8NFH3 380 aa7.66□□□□□ -1.18
SMC4-223ENST00000493695 FEZF2Q8TBJ5 459 aa7.66□□□□□ -1.18
SMC4-223ENST00000493695 MZB1Q8WU39 189 aa7.66□□□□□ -1.18
SMC4-223ENST00000493695 GFOD1Q9NXC2 390 aa7.66□□□□□ -1.18
SMC4-223ENST00000493695 ROBO2Q9HCK4 1378 aa7.66□□□□□ -1.18
SMC4-223ENST00000493695 OTOL1A6NHN0 477 aaPredicted RBP7.65□□□□□ -1.18
SMC4-223ENST00000493695 HRKO00198 91 aa7.65□□□□□ -1.18
SMC4-223ENST00000493695 GARTP22102 1010 aa7.65□□□□□ -1.18
SMC4-223ENST00000493695 HSF5Q4G112 596 aaPredicted RBP7.65□□□□□ -1.18
SMC4-223ENST00000493695 ERICH6BQ5W0A0 696 aa7.65□□□□□ -1.18
SMC4-223ENST00000493695 NAT16Q8N8M0 369 aa7.65□□□□□ -1.18
SMC4-223ENST00000493695 ZNF296Q8WUU4 475 aaPredicted RBP7.65□□□□□ -1.18
SMC4-223ENST00000493695 ATG4CQ96DT6 458 aa7.65□□□□□ -1.18
SMC4-223ENST00000493695 DSCC1Q9BVC3 393 aa7.65□□□□□ -1.18
SMC4-223ENST00000493695 PCDHB12Q9Y5F1 795 aa7.65□□□□□ -1.18
SMC4-223ENST00000493695 PDIA4P13667 645 aaKnown RBP7.64□□□□□ -1.19
SMC4-223ENST00000493695 CDR1P51861 262 aa7.64□□□□□ -1.19
SMC4-223ENST00000493695 NCKAP1LP55160 1127 aa7.64□□□□□ -1.19
SMC4-223ENST00000493695 TMEM62Q0P6H9 643 aa7.64□□□□□ -1.19
SMC4-223ENST00000493695 APOBRQ0VD83 1088 aa7.64□□□□□ -1.19
SMC4-223ENST00000493695 DACT3Q96B18 629 aaPredicted RBP7.64□□□□□ -1.19
SMC4-223ENST00000493695 GGT7Q9UJ14 662 aa7.64□□□□□ -1.19
SMC4-223ENST00000493695 A0A1W2PQJ5 194 aa7.63□□□□□ -1.19
SMC4-223ENST00000493695 FADS2P1A8MWK0 482 aa7.63□□□□□ -1.19
SMC4-223ENST00000493695 ENDOUP21128 410 aaKnown RBP7.63□□□□□ -1.19
SMC4-223ENST00000493695 CLCQ05315 142 aa7.63□□□□□ -1.19
SMC4-223ENST00000493695 LAPTM5Q13571 262 aa7.63□□□□□ -1.19
SMC4-223ENST00000493695 CDCP2Q5VXM1 449 aa7.63□□□□□ -1.19
SMC4-223ENST00000493695 PWWP2AQ96N64 755 aa7.63□□□□□ -1.19
SMC4-223ENST00000493695 SLC6A18Q96N87 628 aa7.63□□□□□ -1.19
SMC4-223ENST00000493695 CNNM2Q9H8M5 875 aa7.63□□□□□ -1.19
SMC4-223ENST00000493695 UBP1Q9NZI7 540 aa7.63□□□□□ -1.19
SMC4-223ENST00000493695 ATE1O95260 518 aa7.62□□□□□ -1.19
SMC4-223ENST00000493695 CRKP46108 304 aa7.62□□□□□ -1.19
SMC4-223ENST00000493695 ERVFRD-1P60508 538 aa7.62□□□□□ -1.19
SMC4-223ENST00000493695 YBX1P67809 324 aaKnown RBP7.62□□□□□ -1.19
SMC4-223ENST00000493695 SYT8Q8NBV8 401 aa7.62□□□□□ -1.19
SMC4-223ENST00000493695 ANTXR1Q9H6X2 564 aa7.62□□□□□ -1.19
SMC4-223ENST00000493695 AP5S1Q9NUS5 200 aa7.62□□□□□ -1.19
SMC4-223ENST00000493695 ERVK13-1Q9NX77 482 aa7.62□□□□□ -1.19
SMC4-223ENST00000493695 KLHL14Q9P2G3 628 aa7.62□□□□□ -1.19
SMC4-223ENST00000493695 ZNF165P49910 485 aa7.61□□□□□ -1.19
SMC4-223ENST00000493695 CRTC3Q6UUV7 619 aa7.61□□□□□ -1.19
SMC4-223ENST00000493695 HS2ST1Q7LGA3 356 aa7.61□□□□□ -1.19
SMC4-223ENST00000493695 ERMP1Q7Z2K6 904 aa7.61□□□□□ -1.19
SMC4-223ENST00000493695 PRRT2Q7Z6L0 340 aaPredicted RBP7.61□□□□□ -1.19
SMC4-223ENST00000493695 LDHDQ86WU2 507 aa7.61□□□□□ -1.19
SMC4-223ENST00000493695 JAMLQ86YT9 394 aa7.61□□□□□ -1.19
SMC4-223ENST00000493695 SP8Q8IXZ3 490 aa7.61□□□□□ -1.19
SMC4-223ENST00000493695 LRRC3Q9BY71 257 aa7.61□□□□□ -1.19
SMC4-223ENST00000493695 XYLT2Q9H1B5 865 aa7.61□□□□□ -1.19
SMC4-223ENST00000493695 RTEL1Q9NZ71 1219 aa7.61□□□□□ -1.19
SMC4-223ENST00000493695 IMPACTQ9P2X3 320 aa7.61□□□□□ -1.19
SMC4-223ENST00000493695 A0A1W2PQ45 241 aaPredicted RBP7.6□□□□□ -1.19
SMC4-223ENST00000493695 A0A1W2PQY0 241 aa7.6□□□□□ -1.19
SMC4-223ENST00000493695 BUB1BO60566 1050 aaPredicted RBP7.6□□□□□ -1.19
SMC4-223ENST00000493695 CELA3BP08861 270 aa7.6□□□□□ -1.19
SMC4-223ENST00000493695 CCNFP41002 786 aa7.6□□□□□ -1.19
SMC4-223ENST00000493695 CWF19L1Q69YN2 538 aaKnown RBP7.6□□□□□ -1.19
SMC4-223ENST00000493695 FAM129CQ86XR2 697 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms