RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 H2AFVQ71UI9 128 aa22.1■■□□□ 1.13
RNF40-203ENST00000493683 FANCBQ8NB91 859 aa22.1■■□□□ 1.13
RNF40-203ENST00000493683 RFC1P35251 1148 aaPredicted RBP22.09■■□□□ 1.13
RNF40-203ENST00000493683 AOC3Q16853 763 aa22.09■■□□□ 1.13
RNF40-203ENST00000493683 MIER3Q7Z3K6 550 aa22.09■■□□□ 1.13
RNF40-203ENST00000493683 RIOK1Q9BRS2 568 aaKnown RBP22.09■■□□□ 1.13
RNF40-203ENST00000493683 BTG4Q9NY30 223 aa22.09■■□□□ 1.13
RNF40-203ENST00000493683 ERBB4Q15303 1308 aa22.09■■□□□ 1.13
RNF40-203ENST00000493683 ADCY8P40145 1251 aa22.09■■□□□ 1.13
RNF40-203ENST00000493683 SATB1Q01826 763 aa22.09■■□□□ 1.13
RNF40-203ENST00000493683 DPP8Q6V1X1 898 aaPredicted RBP22.09■■□□□ 1.13
RNF40-203ENST00000493683 NEK8Q86SG6 692 aa22.09■■□□□ 1.13
RNF40-203ENST00000493683 HAUS8Q9BT25 410 aa22.09■■□□□ 1.13
RNF40-203ENST00000493683 GUCY2FP51841 1108 aa22.09■■□□□ 1.13
RNF40-203ENST00000493683 LMNB2Q03252 620 aa22.09■■□□□ 1.13
RNF40-203ENST00000493683 GNPTABQ3T906 1256 aa22.09■■□□□ 1.13
RNF40-203ENST00000493683 GSDMBQ8TAX9 411 aa22.09■■□□□ 1.13
RNF40-203ENST00000493683 DEPTORQ8TB45 409 aa22.09■■□□□ 1.13
RNF40-203ENST00000493683 CACYBPQ9HB71 228 aaKnown RBP22.09■■□□□ 1.13
RNF40-203ENST00000493683 COL4A3BPQ9Y5P4 624 aa22.09■■□□□ 1.13
RNF40-203ENST00000493683 MED23Q9ULK4 1368 aa22.09■■□□□ 1.13
RNF40-203ENST00000493683 ZNF608Q9ULD9 1512 aaPredicted RBP22.09■■□□□ 1.13
RNF40-203ENST00000493683 CFBP00751 764 aa22.08■■□□□ 1.13
RNF40-203ENST00000493683 CTAGE3PQ8IX95 158 aa22.08■■□□□ 1.13
RNF40-203ENST00000493683 PDE6CP51160 858 aa22.08■■□□□ 1.13
RNF40-203ENST00000493683 ARHGAP4P98171 946 aa22.08■■□□□ 1.13
RNF40-203ENST00000493683 SLC17A8Q8NDX2 589 aa22.08■■□□□ 1.13
RNF40-203ENST00000493683 C1orf112Q9NSG2 853 aa22.08■■□□□ 1.13
RNF40-203ENST00000493683 PASKQ96RG2 1323 aa22.08■■□□□ 1.13
RNF40-203ENST00000493683 EIF3CLB5ME19 914 aaKnown RBP22.08■■□□□ 1.13
RNF40-203ENST00000493683 KRT19P08727 400 aa22.08■■□□□ 1.13
RNF40-203ENST00000493683 EIF3CQ99613 913 aaKnown RBP22.08■■□□□ 1.13
RNF40-203ENST00000493683 LARSQ9P2J5 1176 aaKnown RBP22.08■■□□□ 1.13
RNF40-203ENST00000493683 RNASELQ05823 741 aaKnown RBP22.08■■□□□ 1.12
RNF40-203ENST00000493683 GABPAQ06546 454 aa22.08■■□□□ 1.12
RNF40-203ENST00000493683 GOLGA8QA0A0J9YX86 632 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 GOLGA8OA6NCC3 632 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 GOLGA8NF8WBI6 632 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 DDX39AO00148 427 aaKnown RBP22.07■■□□□ 1.12
RNF40-203ENST00000493683 TRAPPC10P48553 1259 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 TPH2Q8IWU9 490 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 RETREG2Q8NC44 543 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 TDRD7Q8NHU6 1098 aaKnown RBP22.07■■□□□ 1.12
RNF40-203ENST00000493683 ZNF215Q9UL58 517 aaPredicted RBP22.07■■□□□ 1.12
RNF40-203ENST00000493683 CCDC170Q8IYT3 715 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 GSDMAQ96QA5 445 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 EPN1Q9Y6I3 576 aaPredicted RBP22.07■■□□□ 1.12
RNF40-203ENST00000493683 ERVV-2B6SEH9 535 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 SCG2P13521 617 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 KCNA6P17658 529 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 POLR2BP30876 1174 aaKnown RBP22.07■■□□□ 1.12
RNF40-203ENST00000493683 TCIRG1Q13488 830 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 MAEAQ7L5Y9 396 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 RABEP2Q9H5N1 569 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 SOS2Q07890 1332 aaPredicted RBP22.07■■□□□ 1.12
RNF40-203ENST00000493683 STAM2O75886 525 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 RPN1P04843 607 aaKnown RBP22.07■■□□□ 1.12
RNF40-203ENST00000493683 RTEL1Q9NZ71 1219 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 CDC23Q9UJX2 597 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 M0QZ92 97 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 PPP1R2P3Q6NXS1 205 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 IFNL3Q8IZI9 196 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 PANK4Q9NVE7 773 aa22.07■■□□□ 1.12
RNF40-203ENST00000493683 PPP6R2O75170 966 aa22.06■■□□□ 1.12
RNF40-203ENST00000493683 TAF5LO75529 589 aa22.06■■□□□ 1.12
RNF40-203ENST00000493683 CUL4BQ13620 913 aa22.06■■□□□ 1.12
RNF40-203ENST00000493683 RPS6KA2Q15349 733 aa22.06■■□□□ 1.12
RNF40-203ENST00000493683 MAPKAPK5Q8IW41 473 aa22.06■■□□□ 1.12
RNF40-203ENST00000493683 BCAS4Q8TDM0 211 aa22.06■■□□□ 1.12
RNF40-203ENST00000493683 KRT81Q14533 505 aa22.06■■□□□ 1.12
RNF40-203ENST00000493683 TGFBRAP1Q8WUH2 860 aa22.06■■□□□ 1.12
RNF40-203ENST00000493683 STAMQ92783 540 aa22.06■■□□□ 1.12
RNF40-203ENST00000493683 ZNF277Q9NRM2 450 aaPredicted RBP22.06■■□□□ 1.12
RNF40-203ENST00000493683 BIN2Q9UBW5 565 aaPredicted RBP22.06■■□□□ 1.12
RNF40-203ENST00000493683 PCDHA12Q9UN75 941 aa22.06■■□□□ 1.12
RNF40-203ENST00000493683 THAP12O43422 761 aa22.06■■□□□ 1.12
RNF40-203ENST00000493683 USH1GQ495M9 461 aa22.06■■□□□ 1.12
RNF40-203ENST00000493683 KRT26Q7Z3Y9 468 aa22.06■■□□□ 1.12
RNF40-203ENST00000493683 SPZ1Q9BXG8 430 aa22.06■■□□□ 1.12
RNF40-203ENST00000493683 PCDHA7Q9UN72 937 aa22.06■■□□□ 1.12
RNF40-203ENST00000493683 IKBKBO14920 756 aa22.06■■□□□ 1.12
RNF40-203ENST00000493683 ZBTB8OSQ8IWT0 167 aa22.06■■□□□ 1.12
RNF40-203ENST00000493683 MGARPQ8TDB4 240 aa22.06■■□□□ 1.12
RNF40-203ENST00000493683 ADCY9O60503 1353 aa22.06■■□□□ 1.12
RNF40-203ENST00000493683 CTTNBP2Q8WZ74 1663 aa22.05■■□□□ 1.12
RNF40-203ENST00000493683 PFDN6O15212 129 aa22.05■■□□□ 1.12
RNF40-203ENST00000493683 GSPT1P15170 499 aaKnown RBP22.05■■□□□ 1.12
RNF40-203ENST00000493683 ATF2P15336 505 aa22.05■■□□□ 1.12
RNF40-203ENST00000493683 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.05■■□□□ 1.12
RNF40-203ENST00000493683 HGSO14964 777 aaPredicted RBP22.05■■□□□ 1.12
RNF40-203ENST00000493683 STMN1P16949 149 aa22.05■■□□□ 1.12
RNF40-203ENST00000493683 BPIFB4P59827 614 aa22.05■■□□□ 1.12
RNF40-203ENST00000493683 TPCN1Q9ULQ1 816 aa22.05■■□□□ 1.12
RNF40-203ENST00000493683 CTSWP56202 376 aa22.05■■□□□ 1.12
RNF40-203ENST00000493683 NSMFQ6X4W1 530 aa22.05■■□□□ 1.12
RNF40-203ENST00000493683 PROCA1Q8NCQ7 364 aaPredicted RBP22.05■■□□□ 1.12
RNF40-203ENST00000493683 CSRNP1Q96S65 589 aa22.05■■□□□ 1.12
RNF40-203ENST00000493683 LGR6Q9HBX8 967 aa22.05■■□□□ 1.12
RNF40-203ENST00000493683 MRPL11Q9Y3B7 192 aaKnown RBP22.05■■□□□ 1.12
RNF40-203ENST00000493683 EEF1GP26641 437 aaKnown RBP22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms