RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 NAP1L5Q96NT1 182 aaPredicted RBP12.28□□□□□ -0.44
PHACTR4-204ENST00000493669 COL2A1P02458 1487 aaPredicted RBP12.28□□□□□ -0.44
PHACTR4-204ENST00000493669 FOXN1O15353 648 aa12.27□□□□□ -0.44
PHACTR4-204ENST00000493669 PDILTQ8N807 584 aa12.27□□□□□ -0.44
PHACTR4-204ENST00000493669 GSDMAQ96QA5 445 aa12.27□□□□□ -0.44
PHACTR4-204ENST00000493669 ERCC5P28715 1186 aaPredicted RBP12.27□□□□□ -0.45
PHACTR4-204ENST00000493669 EZH2Q15910 746 aaKnown RBP12.27□□□□□ -0.45
PHACTR4-204ENST00000493669 GPATCH4Q5T3I0 446 aaKnown RBP12.27□□□□□ -0.45
PHACTR4-204ENST00000493669 NRBP1Q9UHY1 535 aa12.27□□□□□ -0.45
PHACTR4-204ENST00000493669 A0A087X0B3 334 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 USP17L5A8MUK1 530 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 PRR29P0C7W0 189 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 SCN9AQ15858 1988 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 ENOX1Q8TC92 643 aaKnown RBP12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 PAGE5Q96GU1 130 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 PYCARDQ9ULZ3 195 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 BMP6P22004 513 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 CHRNA5P30532 468 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 NONOQ15233 471 aaKnown RBP eCLIP12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 E2F4Q16254 413 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 CCDC144BQ3MJ40 725 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 HSD3B7Q9H2F3 369 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 PI4KBQ9UBF8 816 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 MTMR7Q9Y216 660 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 SMCO2A6NFE2 343 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 ADAMTS3O15072 1205 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 TPM2P07951 284 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 FANCCQ00597 558 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 ZNF543Q08ER8 600 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 ISM2Q6H9L7 571 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 DTHD1Q6ZMT9 781 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 KIAA0825Q8IV33 1275 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 LRRC8AQ8IWT6 810 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 XPO4Q9C0E2 1151 aaKnown RBP12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 IFNKQ9P0W0 207 aa12.26□□□□□ -0.45
PHACTR4-204ENST00000493669 PSME4Q14997 1843 aa12.25□□□□□ -0.45
PHACTR4-204ENST00000493669 NFIAQ12857 509 aa12.25□□□□□ -0.45
PHACTR4-204ENST00000493669 DPYDQ12882 1025 aa12.25□□□□□ -0.45
PHACTR4-204ENST00000493669 SEMA3FQ13275 785 aa12.25□□□□□ -0.45
PHACTR4-204ENST00000493669 CCDC150Q8NCX0 1101 aa12.25□□□□□ -0.45
PHACTR4-204ENST00000493669 PIGSQ96S52 555 aa12.25□□□□□ -0.45
PHACTR4-204ENST00000493669 RGS17Q9UGC6 210 aaPredicted RBP12.25□□□□□ -0.45
PHACTR4-204ENST00000493669 ENTPD3O75355 529 aa12.25□□□□□ -0.45
PHACTR4-204ENST00000493669 EN1Q05925 392 aaPredicted RBP12.25□□□□□ -0.45
PHACTR4-204ENST00000493669 IL17AQ16552 155 aa12.25□□□□□ -0.45
PHACTR4-204ENST00000493669 INF2Q27J81 1249 aa12.25□□□□□ -0.45
PHACTR4-204ENST00000493669 RASGRP4Q8TDF6 673 aa12.25□□□□□ -0.45
PHACTR4-204ENST00000493669 CACTINQ8WUQ7 758 aaKnown RBP12.25□□□□□ -0.45
PHACTR4-204ENST00000493669 AK8Q96MA6 479 aa12.25□□□□□ -0.45
PHACTR4-204ENST00000493669 SIPA1L1O43166 1804 aa12.25□□□□□ -0.45
PHACTR4-204ENST00000493669 ATRNL1Q5VV63 1379 aa12.25□□□□□ -0.45
PHACTR4-204ENST00000493669 GTPBP6O43824 516 aaPredicted RBP12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 LMOD1P29536 600 aaPredicted RBP12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 HOMER1Q86YM7 354 aa12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 LRRC47Q8N1G4 583 aaKnown RBP12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 MKL1Q969V6 931 aa12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 KCNQ5Q9NR82 932 aa12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 MYL1P05976 194 aa12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 AOC3Q16853 763 aa12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 PDXDC2PQ6P474 469 aa12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 RASGRP2Q7LDG7 609 aa12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 NEK8Q86SG6 692 aa12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 GRAMD1CQ8IYS0 662 aa12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 RTKN2Q8IZC4 609 aa12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 REXO1Q8N1G1 1221 aaKnown RBP12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 CCSER1Q9C0I3 900 aa12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 NYAP2Q9P242 653 aa12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 FAM198AQ9UFP1 575 aa12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 PNMA6FA0A0J9YX94 578 aa12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 TATDN1Q6P1N9 297 aa12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 POTEAQ6S8J7 498 aa12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 PSMD1Q99460 953 aa12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 VPS33BQ9H267 617 aa12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 KANSL2Q9H9L4 492 aa12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 MAGEF1Q9HAY2 307 aa12.24□□□□□ -0.45
PHACTR4-204ENST00000493669 ADCY7P51828 1080 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 RBM5P52756 815 aaKnown RBP eCLIP12.23□□□□□ -0.456e-12■■■□□ 16.5
PHACTR4-204ENST00000493669 LRMPQ12912 555 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 CCDC93Q567U6 631 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 UBA5Q9GZZ9 404 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 CPVLQ9H3G5 476 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 CUEDC2Q9H467 287 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 RMND1Q9NWS8 449 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 MYH4Q9Y623 1939 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 FRMPD2Q68DX3 1309 aaPredicted RBP12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 PPIP5K2O43314 1243 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 SERPINC1P01008 464 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 OR52Z1P0C646 297 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 ZNF18P17022 549 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 UBASH3AP57075 661 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 FILIP1Q7Z7B0 1213 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 SLC16A10Q8TF71 515 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 DCAF4Q8WV16 495 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 MTMR8Q96EF0 704 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 PRIMPOLQ96LW4 560 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 TRIM34Q9BYJ4 488 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 GLT8D2Q9H1C3 349 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 DNAJC18Q9H819 358 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 DISC1Q9NRI5 854 aa12.23□□□□□ -0.45
PHACTR4-204ENST00000493669 FANCLQ9NW38 375 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms