RNA–Protein interactions for RNA: ENST00000493660.5

SMARCE1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-211ENST00000493660 L3MBTL3Q96JM7 780 aaPredicted RBP8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 GINM1Q9NU53 330 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 SYNPO2Q9UMS6 1093 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 NMT2O60551 498 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 FMNL1O95466 1100 aaPredicted RBP8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 ZSCAN22P10073 491 aaPredicted RBP8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 CDC27P30260 824 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 BIRC2Q13490 618 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 GRM4Q14833 912 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 CERKLQ49MI3 558 aaPredicted RBP8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 TMEM179Q6ZVK1 233 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 SRLQ86TD4 932 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 PNMA1Q8ND90 353 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 CTCFLQ8NI51 663 aaPredicted RBP8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 WASF1Q92558 559 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 CEP95Q96GE4 821 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 PAIP2Q9BPZ3 127 aaKnown RBP8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 TACO1Q9BSH4 297 aaKnown RBP8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 ADARB2Q9NS39 739 aaKnown RBP8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 MTMR4Q9NYA4 1195 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 ZDHHC9Q9Y397 364 aa8.26□□□□□ -1.09
SMARCE1-211ENST00000493660 CTAGE5O15320 804 aa8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 TTLL1O95922 423 aa8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 ADD1P35611 737 aaKnown RBP8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 MAP2K2P36507 400 aa8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 MAGEA9P43362 315 aa8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 SSRP1Q08945 709 aaKnown RBP8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 TBC1D10BQ4KMP7 808 aaPredicted RBP8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 DPY19L2Q6NUT2 758 aa8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 SAMD7Q7Z3H4 446 aa8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 TRIM22Q8IYM9 498 aa8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 ANKRD20A12PQ8NF67 263 aa8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 NUP133Q8WUM0 1156 aa8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 TMEM47Q9BQJ4 181 aa8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 LZTS2Q9BRK4 669 aa8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 MYL10Q9BUA6 226 aa8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 RNF26Q9BY78 433 aaPredicted RBP8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.25□□□□□ -1.092e-6■■■■■ 27.2
SMARCE1-211ENST00000493660 NYAP2Q9P242 653 aa8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 RBM27Q9P2N5 1060 aaKnown RBP8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 ORC3Q9UBD5 711 aaPredicted RBP8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 HACL1Q9UJ83 578 aa8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 MTMR6Q9Y217 621 aa8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 ATP6V1DQ9Y5K8 247 aa8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 POLR2AP24928 1970 aaKnown RBP8.25□□□□□ -1.09
SMARCE1-211ENST00000493660 H0YHG0 523 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 FDPSP14324 419 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 SMARCA1P28370 1054 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 SARNPP82979 210 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 MTA1Q13330 715 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 RASA3Q14644 834 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 ABCB5Q2M3G0 1257 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 MAP9Q49MG5 647 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 RBM26Q5T8P6 1007 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 TMTC3Q6ZXV5 915 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 MKL1Q969V6 931 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 KANSL2Q9H9L4 492 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 CABP5Q9NP86 173 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 TCHHQ07283 1943 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 PAPPA2Q9BXP8 1791 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 DEXIO95424 95 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 F13A1P00488 732 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 EGFRP00533 1210 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 TNNT1P13805 278 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 RXRAP19793 462 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 GPS2Q13227 327 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 PKP1Q13835 747 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 BMS1Q14692 1282 aaKnown RBP8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 KRBA2Q6ZNG9 492 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 RAB11FIP4Q86YS3 637 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 IQUBQ8NA54 791 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 TRPM4Q8TD43 1214 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 DDX11Q96FC9 970 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 TEPSINQ96N21 525 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 TMEM39BQ9GZU3 492 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 STX8Q9UNK0 236 aa8.24□□□□□ -1.09
SMARCE1-211ENST00000493660 H3BQV1 296 aa8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 TRIM66O15016 1216 aa8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 PRPF3O43395 683 aaKnown RBP8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 DDNO94850 711 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 SNHG28P0DPA3 235 aa8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 TPM4P67936 248 aa8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 FUT2Q10981 343 aa8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 ASPRV1Q53RT3 343 aa8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 DCAF15Q66K64 600 aa8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 CCDC144CPQ8IYA2 1237 aa8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 FAM177A1Q8N128 213 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 ZNF513Q8N8E2 541 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 ZSCAN16Q9H4T2 348 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 LMBRD1Q9NUN5 540 aa8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 RRP15Q9Y3B9 282 aaKnown RBP8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 CNTNAP5Q8WYK1 1306 aa8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 VPS37CA5D8V6 355 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 ANKRD33BA6NCL7 494 aa8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 PALM3A6NDB9 673 aaPredicted RBP8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 GLTPD2A6NH11 291 aa8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 EPS15P42566 896 aa8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 AKAP17AQ02040 695 aaKnown RBP8.23□□□□□ -1.09
SMARCE1-211ENST00000493660 PPP2R5AQ15172 486 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms