RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 TXNRD2Q9NNW7 524 aa15.69■□□□□ 0.1
MSH6-208ENST00000493177 MTMR4Q9NYA4 1195 aa15.69■□□□□ 0.1
MSH6-208ENST00000493177 RABGAP1Q9Y3P9 1069 aa15.69■□□□□ 0.1
MSH6-208ENST00000493177 RBM19Q9Y4C8 960 aaKnown RBP15.69■□□□□ 0.1
MSH6-208ENST00000493177 PLXNB2O15031 1838 aa15.68■□□□□ 0.1
MSH6-208ENST00000493177 IGKV6D-41A0A0C4DH26 115 aa15.68■□□□□ 0.1
MSH6-208ENST00000493177 TTLL1O95922 423 aa15.68■□□□□ 0.1
MSH6-208ENST00000493177 INHAP05111 366 aa15.68■□□□□ 0.1
MSH6-208ENST00000493177 CCL5P13501 91 aa15.68■□□□□ 0.1
MSH6-208ENST00000493177 EEF2P13639 858 aaKnown RBP15.68■□□□□ 0.1
MSH6-208ENST00000493177 CYP2B6P20813 491 aa15.68■□□□□ 0.1
MSH6-208ENST00000493177 APOBRQ0VD83 1088 aa15.68■□□□□ 0.1
MSH6-208ENST00000493177 TOB2Q14106 344 aaPredicted RBP15.68■□□□□ 0.1
MSH6-208ENST00000493177 COG2Q14746 738 aa15.68■□□□□ 0.1
MSH6-208ENST00000493177 SEC23AQ15436 765 aa15.68■□□□□ 0.1
MSH6-208ENST00000493177 SYNE3Q6ZMZ3 975 aa15.68■□□□□ 0.1
MSH6-208ENST00000493177 DGKHQ86XP1 1220 aa15.68■□□□□ 0.1
MSH6-208ENST00000493177 HSCBQ8IWL3 235 aa15.68■□□□□ 0.1
MSH6-208ENST00000493177 TMTC2Q8N394 836 aa15.68■□□□□ 0.1
MSH6-208ENST00000493177 PXYLP1Q8TE99 480 aa15.68■□□□□ 0.1
MSH6-208ENST00000493177 SOCS4Q8WXH5 440 aa15.68■□□□□ 0.1
MSH6-208ENST00000493177 ALDH8A1Q9H2A2 487 aaPredicted RBP15.68■□□□□ 0.1
MSH6-208ENST00000493177 VCPKMTQ9H867 229 aa15.68■□□□□ 0.1
MSH6-208ENST00000493177 RBPJLQ9UBG7 517 aa15.68■□□□□ 0.1
MSH6-208ENST00000493177 CLIP2Q9UDT6 1046 aa15.68■□□□□ 0.1
MSH6-208ENST00000493177 TMX2Q9Y320 296 aa15.68■□□□□ 0.1
MSH6-208ENST00000493177 IVNS1ABPQ9Y6Y0 642 aa15.68■□□□□ 0.1
MSH6-208ENST00000493177 GREB1LQ9C091 1923 aaPredicted RBP15.68■□□□□ 0.1
MSH6-208ENST00000493177 COL11A1P12107 1806 aaPredicted RBP15.67■□□□□ 0.1
MSH6-208ENST00000493177 PARP14Q460N5 1801 aa15.67■□□□□ 0.1
MSH6-208ENST00000493177 KLF18A0A0U1RQI7 1052 aa15.67■□□□□ 0.1
MSH6-208ENST00000493177 FLOT1O75955 427 aa15.67■□□□□ 0.1
MSH6-208ENST00000493177 LIFRP42702 1097 aa15.67■□□□□ 0.1
MSH6-208ENST00000493177 MCM2P49736 904 aa15.67■□□□□ 0.1
MSH6-208ENST00000493177 PLS1Q14651 629 aa15.67■□□□□ 0.1
MSH6-208ENST00000493177 Q3C1V9 767 aa15.67■□□□□ 0.1
MSH6-208ENST00000493177 LRRC47Q8N1G4 583 aaKnown RBP15.67■□□□□ 0.1
MSH6-208ENST00000493177 SENP2Q9HC62 589 aa15.67■□□□□ 0.1
MSH6-208ENST00000493177 HOXC10Q9NYD6 342 aa15.67■□□□□ 0.1
MSH6-208ENST00000493177 ISY1Q9ULR0 285 aaKnown RBP15.67■□□□□ 0.1
MSH6-208ENST00000493177 MTMR7Q9Y216 660 aa15.67■□□□□ 0.1
MSH6-208ENST00000493177 SPDYE16A6NNV3 312 aaPredicted RBP15.66■□□□□ 0.1
MSH6-208ENST00000493177 WDR46O15213 610 aaKnown RBP15.66■□□□□ 0.1
MSH6-208ENST00000493177 TOP1P11387 765 aaKnown RBP15.66■□□□□ 0.1
MSH6-208ENST00000493177 GPR142Q7Z601 462 aa15.66■□□□□ 0.1
MSH6-208ENST00000493177 PLEKHH3Q7Z736 793 aa15.66■□□□□ 0.1
MSH6-208ENST00000493177 CATIPQ7Z7H3 387 aa15.66■□□□□ 0.1
MSH6-208ENST00000493177 RAB11FIP4Q86YS3 637 aa15.66■□□□□ 0.1
MSH6-208ENST00000493177 TMEM47Q9BQJ4 181 aa15.66■□□□□ 0.1
MSH6-208ENST00000493177 PORCNQ9H237 461 aa15.66■□□□□ 0.1
MSH6-208ENST00000493177 NYAP2Q9P242 653 aa15.66■□□□□ 0.1
MSH6-208ENST00000493177 SLC12A7Q9Y666 1083 aa15.66■□□□□ 0.1
MSH6-208ENST00000493177 GOLGA8BA8MQT2 603 aa15.65■□□□□ 0.1
MSH6-208ENST00000493177 CD2BP2O95400 341 aaKnown RBP15.65■□□□□ 0.1
MSH6-208ENST00000493177 HMGCRP04035 888 aa15.65■□□□□ 0.1
MSH6-208ENST00000493177 RGS2P41220 211 aa15.65■□□□□ 0.1
MSH6-208ENST00000493177 STK3Q13188 491 aa15.65■□□□□ 0.1
MSH6-208ENST00000493177 RCSD1Q6JBY9 416 aa15.65■□□□□ 0.1
MSH6-208ENST00000493177 SGMS1Q86VZ5 419 aa15.65■□□□□ 0.1
MSH6-208ENST00000493177 FBXL16Q8N461 479 aa15.65■□□□□ 0.1
MSH6-208ENST00000493177 PNMA1Q8ND90 353 aa15.65■□□□□ 0.1
MSH6-208ENST00000493177 NUP133Q8WUM0 1156 aa15.65■□□□□ 0.1
MSH6-208ENST00000493177 ANKS1AQ92625 1134 aa15.65■□□□□ 0.1
MSH6-208ENST00000493177 CHMP4CQ96CF2 233 aa15.65■□□□□ 0.1
MSH6-208ENST00000493177 AGXT2Q9BYV1 514 aa15.65■□□□□ 0.1
MSH6-208ENST00000493177 UNC93B1Q9H1C4 597 aa15.65■□□□□ 0.1
MSH6-208ENST00000493177 TPCN1Q9ULQ1 816 aa15.65■□□□□ 0.1
MSH6-208ENST00000493177 LIMCH1Q9UPQ0 1083 aa15.65■□□□□ 0.1
MSH6-208ENST00000493177 KIAA0100Q14667 2235 aaKnown RBP15.65■□□□□ 0.1
MSH6-208ENST00000493177 A0A0G2JMZ2 1700 aa15.65■□□□□ 0.1
MSH6-208ENST00000493177 ZBTB43O43298 467 aa15.64■□□□□ 0.09
MSH6-208ENST00000493177 BECN1Q14457 450 aa15.64■□□□□ 0.09
MSH6-208ENST00000493177 LBX2Q6XYB7 198 aa15.64■□□□□ 0.09
MSH6-208ENST00000493177 MICU3Q86XE3 530 aa15.64■□□□□ 0.09
MSH6-208ENST00000493177 ZNF654Q8IZM8 581 aa15.64■□□□□ 0.09
MSH6-208ENST00000493177 SNX21Q969T3 373 aa15.64■□□□□ 0.09
MSH6-208ENST00000493177 MYL10Q9BUA6 226 aa15.64■□□□□ 0.09
MSH6-208ENST00000493177 BTBD7Q9P203 1132 aa15.64■□□□□ 0.09
MSH6-208ENST00000493177 BRPF3Q9ULD4 1205 aa15.64■□□□□ 0.09
MSH6-208ENST00000493177 CTDP1Q9Y5B0 961 aaPredicted RBP15.64■□□□□ 0.09
MSH6-208ENST00000493177 RLFQ13129 1914 aa15.63■□□□□ 0.09
MSH6-208ENST00000493177 GOLGA8AA7E2F4 631 aa15.63■□□□□ 0.09
MSH6-208ENST00000493177 CNMDO75829 334 aa15.63■□□□□ 0.09
MSH6-208ENST00000493177 GJB1P08034 283 aa15.63■□□□□ 0.09
MSH6-208ENST00000493177 RXRAP19793 462 aa15.63■□□□□ 0.09
MSH6-208ENST00000493177 DSG3P32926 999 aa15.63■□□□□ 0.09
MSH6-208ENST00000493177 NOVP48745 357 aa15.63■□□□□ 0.09
MSH6-208ENST00000493177 KIAA1755Q5JYT7 1200 aa15.63■□□□□ 0.09
MSH6-208ENST00000493177 FAM83BQ5T0W9 1011 aa15.63■□□□□ 0.09
MSH6-208ENST00000493177 NCAPG2Q86XI2 1143 aa15.63■□□□□ 0.09
MSH6-208ENST00000493177 CCDC144CPQ8IYA2 1237 aa15.63■□□□□ 0.09
MSH6-208ENST00000493177 TRMT44Q8IYL2 757 aaKnown RBP15.63■□□□□ 0.09
MSH6-208ENST00000493177 MB21D1Q8N884 522 aa15.63■□□□□ 0.09
MSH6-208ENST00000493177 ZSCAN31Q96LW9 406 aaPredicted RBP15.63■□□□□ 0.09
MSH6-208ENST00000493177 SLKQ9H2G2 1235 aaPredicted RBP15.63■□□□□ 0.09
MSH6-208ENST00000493177 GJD2Q9UKL4 321 aa15.63■□□□□ 0.09
MSH6-208ENST00000493177 K7ELQ4 463 aaPredicted RBP15.62■□□□□ 0.09
MSH6-208ENST00000493177 DDAH1O94760 285 aa15.62■□□□□ 0.09
MSH6-208ENST00000493177 TFRCP02786 760 aaKnown RBP15.62■□□□□ 0.09
MSH6-208ENST00000493177 CALM1P0DP23 149 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms