RNA–Protein interactions for RNA: ENST00000493075.1

LRTM1-202, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

TSL 1 (best) BASIC

Gene LRTM1, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-202ENST00000493075 GMCL1Q96IK5 515 aa13.63□□□□□ -0.23
LRTM1-202ENST00000493075 MMP19Q99542 508 aa13.63□□□□□ -0.23
LRTM1-202ENST00000493075 DDX20Q9UHI6 824 aaKnown RBP13.63□□□□□ -0.23
LRTM1-202ENST00000493075 COLQQ9Y215 455 aaPredicted RBP13.63□□□□□ -0.23
LRTM1-202ENST00000493075 PCP11498 1178 aaKnown RBP13.62□□□□□ -0.23
LRTM1-202ENST00000493075 BMP3P12645 472 aa13.62□□□□□ -0.23
LRTM1-202ENST00000493075 CYBAP13498 195 aa13.62□□□□□ -0.23
LRTM1-202ENST00000493075 OAZ1P54368 228 aa13.62□□□□□ -0.23
LRTM1-202ENST00000493075 ZNF792Q3KQV3 632 aa13.62□□□□□ -0.23
LRTM1-202ENST00000493075 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.62□□□□□ -0.23
LRTM1-202ENST00000493075 LRRC47Q8N1G4 583 aaKnown RBP13.62□□□□□ -0.23
LRTM1-202ENST00000493075 MAML3Q96JK9 1138 aa13.62□□□□□ -0.23
LRTM1-202ENST00000493075 SLC38A10Q9HBR0 1119 aa13.62□□□□□ -0.23
LRTM1-202ENST00000493075 INCENPQ9NQS7 918 aa13.62□□□□□ -0.23
LRTM1-202ENST00000493075 IL17RBQ9NRM6 502 aa13.62□□□□□ -0.23
LRTM1-202ENST00000493075 TCP11L1Q9NUJ3 509 aa13.62□□□□□ -0.23
LRTM1-202ENST00000493075 NRBP1Q9UHY1 535 aa13.62□□□□□ -0.23
LRTM1-202ENST00000493075 CCDC171Q6TFL3 1326 aa13.61□□□□□ -0.23
LRTM1-202ENST00000493075 RLFQ13129 1914 aa13.61□□□□□ -0.23
LRTM1-202ENST00000493075 HIP1O00291 1037 aa13.61□□□□□ -0.23
LRTM1-202ENST00000493075 RANBP6O60518 1105 aaKnown RBP13.61□□□□□ -0.23
LRTM1-202ENST00000493075 CNGA1P29973 690 aa13.61□□□□□ -0.23
LRTM1-202ENST00000493075 ZNF589Q86UQ0 364 aaPredicted RBP13.61□□□□□ -0.23
LRTM1-202ENST00000493075 FAM160B2Q86V87 743 aa13.61□□□□□ -0.23
LRTM1-202ENST00000493075 TRPV1Q8NER1 839 aa13.61□□□□□ -0.23
LRTM1-202ENST00000493075 CHURC1Q8WUH1 139 aa13.61□□□□□ -0.23
LRTM1-202ENST00000493075 STX8Q9UNK0 236 aa13.61□□□□□ -0.23
LRTM1-202ENST00000493075 CTDP1Q9Y5B0 961 aaPredicted RBP13.61□□□□□ -0.23
LRTM1-202ENST00000493075 TACC3Q9Y6A5 838 aa13.61□□□□□ -0.23
LRTM1-202ENST00000493075 GREB1LQ9C091 1923 aaPredicted RBP13.6□□□□□ -0.23
LRTM1-202ENST00000493075 A0A0G2JMZ2 1700 aa13.6□□□□□ -0.23
LRTM1-202ENST00000493075 SEPT4O43236 478 aa13.6□□□□□ -0.23
LRTM1-202ENST00000493075 NT5C2P49902 561 aa13.6□□□□□ -0.23
LRTM1-202ENST00000493075 SNRNP48Q6IEG0 339 aaKnown RBP13.6□□□□□ -0.23
LRTM1-202ENST00000493075 RCSD1Q6JBY9 416 aa13.6□□□□□ -0.23
LRTM1-202ENST00000493075 MSL3Q8N5Y2 521 aaKnown RBP13.6□□□□□ -0.23
LRTM1-202ENST00000493075 STAG1Q8WVM7 1258 aa13.6□□□□□ -0.23
LRTM1-202ENST00000493075 KIFC2Q96AC6 838 aa13.6□□□□□ -0.23
LRTM1-202ENST00000493075 TINF2Q9BSI4 451 aa13.6□□□□□ -0.23
LRTM1-202ENST00000493075 PRO3102Q9H379 93 aa13.6□□□□□ -0.23
LRTM1-202ENST00000493075 FBXO40Q9UH90 709 aa13.6□□□□□ -0.23
LRTM1-202ENST00000493075 RIPK3Q9Y572 518 aa13.6□□□□□ -0.23
LRTM1-202ENST00000493075 TMEM232C9JQI7 657 aa13.59□□□□□ -0.23
LRTM1-202ENST00000493075 MCCP23508 829 aa13.59□□□□□ -0.23
LRTM1-202ENST00000493075 SLC1A4P43007 532 aa13.59□□□□□ -0.23
LRTM1-202ENST00000493075 STAT2P52630 851 aa13.59□□□□□ -0.23
LRTM1-202ENST00000493075 CPXCR1Q8N123 301 aa13.59□□□□□ -0.23
LRTM1-202ENST00000493075 ARRDC4Q8NCT1 418 aa13.59□□□□□ -0.23
LRTM1-202ENST00000493075 CHST13Q8NET6 341 aa13.59□□□□□ -0.23
LRTM1-202ENST00000493075 TTC14Q96N46 770 aa13.59□□□□□ -0.23
LRTM1-202ENST00000493075 PFASO15067 1338 aa13.58□□□□□ -0.23
LRTM1-202ENST00000493075 ZNF236Q9UL36 1845 aa13.58□□□□□ -0.24
LRTM1-202ENST00000493075 DNAJC25-GNG10A0A024R161 153 aa13.58□□□□□ -0.24
LRTM1-202ENST00000493075 DNM1LO00429 736 aa13.58□□□□□ -0.24
LRTM1-202ENST00000493075 PGK2P07205 417 aa13.58□□□□□ -0.24
LRTM1-202ENST00000493075 PRAMEF19Q5SWL8 479 aa13.58□□□□□ -0.24
LRTM1-202ENST00000493075 AKNAD1Q5T1N1 836 aa13.58□□□□□ -0.24
LRTM1-202ENST00000493075 MAMDC4Q6UXC1 1216 aa13.58□□□□□ -0.24
LRTM1-202ENST00000493075 CHRDL2Q6WN34 429 aa13.58□□□□□ -0.24
LRTM1-202ENST00000493075 MFSD6Q6ZSS7 791 aa13.58□□□□□ -0.24
LRTM1-202ENST00000493075 ZNF467Q7Z7K2 595 aaPredicted RBP13.58□□□□□ -0.24
LRTM1-202ENST00000493075 DDX11Q96FC9 970 aa13.58□□□□□ -0.24
LRTM1-202ENST00000493075 RNF41Q9H4P4 317 aaPredicted RBP13.58□□□□□ -0.24
LRTM1-202ENST00000493075 RAVER2Q9HCJ3 691 aaKnown RBP13.58□□□□□ -0.24
LRTM1-202ENST00000493075 DIAPH3Q9NSV4 1193 aa13.58□□□□□ -0.24
LRTM1-202ENST00000493075 A0A1W2PPC1 479 aa13.57□□□□□ -0.24
LRTM1-202ENST00000493075 ZNF213O14771 459 aa13.57□□□□□ -0.24
LRTM1-202ENST00000493075 NMT2O60551 498 aa13.57□□□□□ -0.24
LRTM1-202ENST00000493075 TOP1P11387 765 aaKnown RBP13.57□□□□□ -0.24
LRTM1-202ENST00000493075 TKFCQ3LXA3 575 aa13.57□□□□□ -0.24
LRTM1-202ENST00000493075 CWC27Q6UX04 472 aaKnown RBP13.57□□□□□ -0.24
LRTM1-202ENST00000493075 DCAF4Q8WV16 495 aa13.57□□□□□ -0.24
LRTM1-202ENST00000493075 TOMM22Q9NS69 142 aa13.57□□□□□ -0.24
LRTM1-202ENST00000493075 RBM27Q9P2N5 1060 aaKnown RBP13.57□□□□□ -0.24
LRTM1-202ENST00000493075 MYH8P13535 1937 aa13.56□□□□□ -0.24
LRTM1-202ENST00000493075 BMP8BP34820 402 aa13.56□□□□□ -0.24
LRTM1-202ENST00000493075 HAND2P61296 217 aa13.56□□□□□ -0.24
LRTM1-202ENST00000493075 RRP12Q5JTH9 1297 aaKnown RBP13.56□□□□□ -0.24
LRTM1-202ENST00000493075 BTNL9Q6UXG8 535 aa13.56□□□□□ -0.24
LRTM1-202ENST00000493075 KCTD1Q719H9 257 aa13.56□□□□□ -0.24
LRTM1-202ENST00000493075 C7orf61Q8IZ16 206 aa13.56□□□□□ -0.24
LRTM1-202ENST00000493075 ANKRD35Q8N283 1001 aa13.56□□□□□ -0.24
LRTM1-202ENST00000493075 TMEM47Q9BQJ4 181 aa13.56□□□□□ -0.24
LRTM1-202ENST00000493075 DSCC1Q9BVC3 393 aa13.56□□□□□ -0.24
LRTM1-202ENST00000493075 SENP6Q9GZR1 1112 aaPredicted RBP13.56□□□□□ -0.24
LRTM1-202ENST00000493075 SYNGAP1Q96PV0 1343 aa13.56□□□□□ -0.24
LRTM1-202ENST00000493075 ZNF865P0CJ78 1059 aaPredicted RBP13.55□□□□□ -0.24
LRTM1-202ENST00000493075 PDE4AP27815 886 aa13.55□□□□□ -0.24
LRTM1-202ENST00000493075 SLC4A3P48751 1232 aa13.55□□□□□ -0.24
LRTM1-202ENST00000493075 FXR1P51114 621 aaKnown RBP eCLIP13.55□□□□□ -0.24
LRTM1-202ENST00000493075 IKQ13123 557 aaPredicted RBP13.55□□□□□ -0.24
LRTM1-202ENST00000493075 LRRC26Q2I0M4 334 aa13.55□□□□□ -0.24
LRTM1-202ENST00000493075 CCDC178Q5BJE1 867 aa13.55□□□□□ -0.24
LRTM1-202ENST00000493075 ESR2Q92731 530 aa13.55□□□□□ -0.24
LRTM1-202ENST00000493075 GDF15Q99988 308 aa13.55□□□□□ -0.24
LRTM1-202ENST00000493075 CTNNA3Q9UI47 895 aa13.55□□□□□ -0.24
LRTM1-202ENST00000493075 PRR12Q9ULL5 1215 aa13.55□□□□□ -0.24
LRTM1-202ENST00000493075 CNPY2Q9Y2B0 182 aa13.55□□□□□ -0.24
LRTM1-202ENST00000493075 ZNF536O15090 1300 aa13.55□□□□□ -0.24
LRTM1-202ENST00000493075 SNAI1O95863 264 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms