RNA–Protein interactions for RNA: ENST00000492979.2

SSC4D-202, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

TSL 5

Gene SSC4D, Length 1,224 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-202ENST00000492979 CEP290O15078 2479 aa22.33■■□□□ 1.16
SSC4D-202ENST00000492979 NECAB2Q7Z6G3 386 aa22.32■■□□□ 1.16
SSC4D-202ENST00000492979 MSL3Q8N5Y2 521 aaKnown RBP22.32■■□□□ 1.16
SSC4D-202ENST00000492979 NUP88Q99567 741 aaPredicted RBP22.32■■□□□ 1.16
SSC4D-202ENST00000492979 INCENPQ9NQS7 918 aa22.32■■□□□ 1.16
SSC4D-202ENST00000492979 COL11A1P12107 1806 aaPredicted RBP22.31■■□□□ 1.16
SSC4D-202ENST00000492979 RANBP6O60518 1105 aaKnown RBP22.31■■□□□ 1.16
SSC4D-202ENST00000492979 ZBED4O75132 1171 aa22.31■■□□□ 1.16
SSC4D-202ENST00000492979 PLS1Q14651 629 aa22.31■■□□□ 1.16
SSC4D-202ENST00000492979 CWC27Q6UX04 472 aaKnown RBP22.31■■□□□ 1.16
SSC4D-202ENST00000492979 NBPF3Q9H094 633 aa22.31■■□□□ 1.16
SSC4D-202ENST00000492979 ZNFX1Q9P2E3 1918 aaKnown RBP22.3■■□□□ 1.16
SSC4D-202ENST00000492979 CYBAP13498 195 aa22.3■■□□□ 1.16
SSC4D-202ENST00000492979 GSPT1P15170 499 aaKnown RBP22.3■■□□□ 1.16
SSC4D-202ENST00000492979 STAT2P52630 851 aa22.3■■□□□ 1.16
SSC4D-202ENST00000492979 ZNF792Q3KQV3 632 aa22.3■■□□□ 1.16
SSC4D-202ENST00000492979 BTNL9Q6UXG8 535 aa22.3■■□□□ 1.16
SSC4D-202ENST00000492979 MFSD6Q6ZSS7 791 aa22.3■■□□□ 1.16
SSC4D-202ENST00000492979 LRRC47Q8N1G4 583 aaKnown RBP22.3■■□□□ 1.16
SSC4D-202ENST00000492979 MAML3Q96JK9 1138 aa22.3■■□□□ 1.16
SSC4D-202ENST00000492979 FBXO40Q9UH90 709 aa22.3■■□□□ 1.16
SSC4D-202ENST00000492979 CTNNA3Q9UI47 895 aa22.3■■□□□ 1.16
SSC4D-202ENST00000492979 STX8Q9UNK0 236 aa22.3■■□□□ 1.16
SSC4D-202ENST00000492979 RAD50Q92878 1312 aa22.3■■□□□ 1.16
SSC4D-202ENST00000492979 DNAJC25-GNG10A0A024R161 153 aa22.29■■□□□ 1.16
SSC4D-202ENST00000492979 ZNF213O14771 459 aa22.29■■□□□ 1.16
SSC4D-202ENST00000492979 TOP1P11387 765 aaKnown RBP22.29■■□□□ 1.16
SSC4D-202ENST00000492979 COL6A1P12109 1028 aa22.29■■□□□ 1.16
SSC4D-202ENST00000492979 CCND3P30281 292 aaPredicted RBP22.29■■□□□ 1.16
SSC4D-202ENST00000492979 SLC1A4P43007 532 aa22.29■■□□□ 1.16
SSC4D-202ENST00000492979 KCTD2Q14681 263 aa22.29■■□□□ 1.16
SSC4D-202ENST00000492979 CHST13Q8NET6 341 aa22.29■■□□□ 1.16
SSC4D-202ENST00000492979 DCAF4Q8WV16 495 aa22.29■■□□□ 1.16
SSC4D-202ENST00000492979 PAWRQ96IZ0 340 aaKnown RBP22.29■■□□□ 1.16
SSC4D-202ENST00000492979 RAD21O60216 631 aa22.28■■□□□ 1.16
SSC4D-202ENST00000492979 CCDC178Q5BJE1 867 aa22.28■■□□□ 1.16
SSC4D-202ENST00000492979 ZNF467Q7Z7K2 595 aaPredicted RBP22.28■■□□□ 1.16
SSC4D-202ENST00000492979 DGKHQ86XP1 1220 aa22.28■■□□□ 1.16
SSC4D-202ENST00000492979 ANKS1AQ92625 1134 aa22.28■■□□□ 1.16
SSC4D-202ENST00000492979 MMP19Q99542 508 aa22.28■■□□□ 1.16
SSC4D-202ENST00000492979 DDX20Q9UHI6 824 aaKnown RBP22.28■■□□□ 1.16
SSC4D-202ENST00000492979 TMEM232C9JQI7 657 aa22.27■■□□□ 1.16
SSC4D-202ENST00000492979 NMT2O60551 498 aa22.27■■□□□ 1.16
SSC4D-202ENST00000492979 TKFCQ3LXA3 575 aa22.27■■□□□ 1.16
SSC4D-202ENST00000492979 SNRNP48Q6IEG0 339 aaKnown RBP22.27■■□□□ 1.16
SSC4D-202ENST00000492979 MAMDC4Q6UXC1 1216 aa22.27■■□□□ 1.16
SSC4D-202ENST00000492979 ESR2Q92731 530 aa22.27■■□□□ 1.16
SSC4D-202ENST00000492979 RIPK3Q9Y572 518 aa22.27■■□□□ 1.16
SSC4D-202ENST00000492979 NR2E3Q9Y5X4 410 aa22.27■■□□□ 1.16
SSC4D-202ENST00000492979 SEPT4O43236 478 aa22.26■■□□□ 1.15
SSC4D-202ENST00000492979 SNHG28P0DPA3 235 aa22.26■■□□□ 1.15
SSC4D-202ENST00000492979 MCCP23508 829 aa22.26■■□□□ 1.15
SSC4D-202ENST00000492979 CYP2C19P33261 490 aa22.26■■□□□ 1.15
SSC4D-202ENST00000492979 TRPV1Q8NER1 839 aa22.26■■□□□ 1.15
SSC4D-202ENST00000492979 KIFC2Q96AC6 838 aa22.26■■□□□ 1.15
SSC4D-202ENST00000492979 TMEM47Q9BQJ4 181 aa22.26■■□□□ 1.15
SSC4D-202ENST00000492979 TINF2Q9BSI4 451 aa22.26■■□□□ 1.15
SSC4D-202ENST00000492979 TBC1D10CQ8IV04 446 aa22.25■■□□□ 1.15
SSC4D-202ENST00000492979 RUFY2Q8WXA3 655 aa22.25■■□□□ 1.15
SSC4D-202ENST00000492979 DPF3Q92784 378 aa22.25■■□□□ 1.15
SSC4D-202ENST00000492979 PNMA2Q9UL42 364 aa22.25■■□□□ 1.15
SSC4D-202ENST00000492979 ZNF536O15090 1300 aa22.25■■□□□ 1.15
SSC4D-202ENST00000492979 CHMLP26374 656 aa22.24■■□□□ 1.15
SSC4D-202ENST00000492979 HAND2P61296 217 aa22.24■■□□□ 1.15
SSC4D-202ENST00000492979 IRX6P78412 446 aaPredicted RBP22.24■■□□□ 1.15
SSC4D-202ENST00000492979 IMMTQ16891 758 aaKnown RBP22.24■■□□□ 1.15
SSC4D-202ENST00000492979 SYNGAP1Q96PV0 1343 aa22.24■■□□□ 1.15
SSC4D-202ENST00000492979 SAMD1Q6SPF0 538 aaPredicted RBP22.23■■□□□ 1.15
SSC4D-202ENST00000492979 DIS3LQ8TF46 1054 aaKnown RBP22.23■■□□□ 1.15
SSC4D-202ENST00000492979 C11orf49Q9H6J7 331 aa22.23■■□□□ 1.15
SSC4D-202ENST00000492979 CNNM2Q9H8M5 875 aa22.23■■□□□ 1.15
SSC4D-202ENST00000492979 CTDP1Q9Y5B0 961 aaPredicted RBP22.23■■□□□ 1.15
SSC4D-202ENST00000492979 LAMA4Q16363 1823 aa22.22■■□□□ 1.15
SSC4D-202ENST00000492979 H0YGN5 161 aa22.22■■□□□ 1.15
SSC4D-202ENST00000492979 IQCA1Q86XH1 822 aa22.22■■□□□ 1.15
SSC4D-202ENST00000492979 MAF1Q9H063 256 aa22.22■■□□□ 1.15
SSC4D-202ENST00000492979 IL25Q9H293 177 aa22.22■■□□□ 1.15
SSC4D-202ENST00000492979 RAVER2Q9HCJ3 691 aaKnown RBP22.22■■□□□ 1.15
SSC4D-202ENST00000492979 TOMM22Q9NS69 142 aa22.22■■□□□ 1.15
SSC4D-202ENST00000492979 PRR12Q9ULL5 1215 aa22.22■■□□□ 1.15
SSC4D-202ENST00000492979 RANBP2P49792 3224 aaKnown RBP22.22■■□□□ 1.15
SSC4D-202ENST00000492979 DNM1LO00429 736 aa22.21■■□□□ 1.15
SSC4D-202ENST00000492979 PDHBP11177 359 aa22.21■■□□□ 1.15
SSC4D-202ENST00000492979 RRP12Q5JTH9 1297 aaKnown RBP22.21■■□□□ 1.15
SSC4D-202ENST00000492979 CPXCR1Q8N123 301 aa22.21■■□□□ 1.15
SSC4D-202ENST00000492979 ARRDC4Q8NCT1 418 aa22.21■■□□□ 1.15
SSC4D-202ENST00000492979 DDX11Q96FC9 970 aa22.21■■□□□ 1.15
SSC4D-202ENST00000492979 KRT23Q9C075 422 aa22.21■■□□□ 1.15
SSC4D-202ENST00000492979 RANBP17Q9H2T7 1088 aaKnown RBP22.21■■□□□ 1.15
SSC4D-202ENST00000492979 PRO3102Q9H379 93 aa22.21■■□□□ 1.15
SSC4D-202ENST00000492979 PFASO15067 1338 aa22.21■■□□□ 1.15
SSC4D-202ENST00000492979 EVI5O60447 810 aa22.2■■□□□ 1.14
SSC4D-202ENST00000492979 PGK2P07205 417 aa22.2■■□□□ 1.14
SSC4D-202ENST00000492979 GPATCH4Q5T3I0 446 aaKnown RBP22.2■■□□□ 1.14
SSC4D-202ENST00000492979 KCTD1Q719H9 257 aa22.2■■□□□ 1.14
SSC4D-202ENST00000492979 ACAD9Q9H845 621 aa22.2■■□□□ 1.14
SSC4D-202ENST00000492979 ZSWIM5Q9P217 1185 aa22.2■■□□□ 1.14
SSC4D-202ENST00000492979 NEDD4P46934 1319 aa22.2■■□□□ 1.14
SSC4D-202ENST00000492979 DNAH12Q6ZR08 3092 aa22.2■■□□□ 1.14
SSC4D-202ENST00000492979 PLXNA1Q9UIW2 1896 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms