RNA–Protein interactions for RNA: ENST00000492512.1

GPNMB-213, Transcript of glycoprotein nmb, humanhuman

TSL 3

Gene GPNMB, Length 447 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-213ENST00000492512 ATXN2LQ8WWM7 1075 aaKnown RBP16.52■□□□□ 0.24
GPNMB-213ENST00000492512 DDX11Q96FC9 970 aa16.52■□□□□ 0.24
GPNMB-213ENST00000492512 PBX4Q9BYU1 374 aa16.52■□□□□ 0.24
GPNMB-213ENST00000492512 PRDM12Q9H4Q4 367 aa16.52■□□□□ 0.24
GPNMB-213ENST00000492512 ZHX1Q9UKY1 873 aaPredicted RBP16.52■□□□□ 0.24
GPNMB-213ENST00000492512 ELP1O95163 1332 aa16.51■□□□□ 0.23
GPNMB-213ENST00000492512 CYP2D7A0A087X1C5 515 aa16.51■□□□□ 0.23
GPNMB-213ENST00000492512 DUSP11O75319 330 aaKnown RBP16.51■□□□□ 0.23
GPNMB-213ENST00000492512 MBD4O95243 580 aa16.51■□□□□ 0.23
GPNMB-213ENST00000492512 C6orf222P0C671 652 aaPredicted RBP16.51■□□□□ 0.23
GPNMB-213ENST00000492512 PBX2P40425 430 aa16.51■□□□□ 0.23
GPNMB-213ENST00000492512 TMEM240Q5SV17 173 aa16.51■□□□□ 0.23
GPNMB-213ENST00000492512 CCSAPQ6IQ19 270 aaPredicted RBP16.51■□□□□ 0.23
GPNMB-213ENST00000492512 C16orf86Q6ZW13 317 aa16.51■□□□□ 0.23
GPNMB-213ENST00000492512 REPS2Q8NFH8 660 aa16.51■□□□□ 0.23
GPNMB-213ENST00000492512 RHPN1Q8TCX5 695 aa16.51■□□□□ 0.23
GPNMB-213ENST00000492512 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.51■□□□□ 0.23
GPNMB-213ENST00000492512 VTI1AQ96AJ9 217 aa16.51■□□□□ 0.23
GPNMB-213ENST00000492512 DDRGK1Q96HY6 314 aa16.51■□□□□ 0.23
GPNMB-213ENST00000492512 TEX13BQ9BXU2 312 aa16.51■□□□□ 0.23
GPNMB-213ENST00000492512 THEGQ9P2T0 379 aa16.51■□□□□ 0.23
GPNMB-213ENST00000492512 MYADML2A6NDP7 307 aa16.5■□□□□ 0.23
GPNMB-213ENST00000492512 GRXCR1A8MXD5 290 aa16.5■□□□□ 0.23
GPNMB-213ENST00000492512 USP17L12C9JPN9 530 aa16.5■□□□□ 0.23
GPNMB-213ENST00000492512 USP17L21D6R901 530 aa16.5■□□□□ 0.23
GPNMB-213ENST00000492512 SMIM22K7EJ46 135 aa16.5■□□□□ 0.23
GPNMB-213ENST00000492512 SNAI1O95863 264 aaPredicted RBP16.5■□□□□ 0.23
GPNMB-213ENST00000492512 RLBP1P12271 317 aa16.5■□□□□ 0.23
GPNMB-213ENST00000492512 CSF2RAP15509 400 aa16.5■□□□□ 0.23
GPNMB-213ENST00000492512 AKNAD1Q5T1N1 836 aa16.5■□□□□ 0.23
GPNMB-213ENST00000492512 SNRNP48Q6IEG0 339 aaKnown RBP16.5■□□□□ 0.23
GPNMB-213ENST00000492512 C16orf59Q7L2K0 433 aa16.5■□□□□ 0.23
GPNMB-213ENST00000492512 CLASRPQ8N2M8 674 aaKnown RBP16.5■□□□□ 0.23
GPNMB-213ENST00000492512 TMEM199Q8N511 208 aa16.5■□□□□ 0.23
GPNMB-213ENST00000492512 PCSK9Q8NBP7 692 aaKnown RBP16.5■□□□□ 0.23
GPNMB-213ENST00000492512 SPC25Q9HBM1 224 aa16.5■□□□□ 0.23
GPNMB-213ENST00000492512 APBB1O00213 710 aa16.49■□□□□ 0.23
GPNMB-213ENST00000492512 ASGR1P07306 291 aa16.49■□□□□ 0.23
GPNMB-213ENST00000492512 IFIT2P09913 472 aaKnown RBP16.49■□□□□ 0.23
GPNMB-213ENST00000492512 CST5P28325 142 aaPredicted RBP16.49■□□□□ 0.23
GPNMB-213ENST00000492512 CDK7P50613 346 aa16.49■□□□□ 0.23
GPNMB-213ENST00000492512 RASIP1Q5U651 963 aa16.49■□□□□ 0.23
GPNMB-213ENST00000492512 PSRC1Q6PGN9 363 aaPredicted RBP16.49■□□□□ 0.23
GPNMB-213ENST00000492512 MAMDC4Q6UXC1 1216 aa16.49■□□□□ 0.23
GPNMB-213ENST00000492512 ZNF365Q70YC5 407 aa16.49■□□□□ 0.23
GPNMB-213ENST00000492512 ASB2Q96Q27 587 aa16.49■□□□□ 0.23
GPNMB-213ENST00000492512 SLF1Q9BQI6 1058 aa16.49■□□□□ 0.23
GPNMB-213ENST00000492512 PPP1R12CQ9BZL4 782 aa16.49■□□□□ 0.23
GPNMB-213ENST00000492512 BCL11AQ9H165 835 aa16.49■□□□□ 0.23
GPNMB-213ENST00000492512 MSRAQ9UJ68 235 aa16.49■□□□□ 0.23
GPNMB-213ENST00000492512 MYH7P12883 1935 aa16.49■□□□□ 0.23
GPNMB-213ENST00000492512 GBF1Q92538 1859 aa16.48■□□□□ 0.23
GPNMB-213ENST00000492512 A0A0U1RQG5 324 aaPredicted RBP16.48■□□□□ 0.23
GPNMB-213ENST00000492512 TLR3O15455 904 aaKnown RBP16.48■□□□□ 0.23
GPNMB-213ENST00000492512 ACRP10323 421 aa16.48■□□□□ 0.23
GPNMB-213ENST00000492512 ADD2P35612 726 aa16.48■□□□□ 0.23
GPNMB-213ENST00000492512 SLC4A3P48751 1232 aa16.48■□□□□ 0.23
GPNMB-213ENST00000492512 IRX5P78411 483 aaPredicted RBP16.48■□□□□ 0.23
GPNMB-213ENST00000492512 MRPS5P82675 430 aaKnown RBP16.48■□□□□ 0.23
GPNMB-213ENST00000492512 ACVR2BQ13705 512 aa16.48■□□□□ 0.23
GPNMB-213ENST00000492512 CCDC85BQ15834 202 aaPredicted RBP16.48■□□□□ 0.23
GPNMB-213ENST00000492512 SLFNL1Q499Z3 407 aa16.48■□□□□ 0.23
GPNMB-213ENST00000492512 IL27Q8NEV9 243 aa16.48■□□□□ 0.23
GPNMB-213ENST00000492512 ADAMTS19Q8TE59 1207 aa16.48■□□□□ 0.23
GPNMB-213ENST00000492512 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.48■□□□□ 0.23
GPNMB-213ENST00000492512 PAG1Q9NWQ8 432 aa16.48■□□□□ 0.23
GPNMB-213ENST00000492512 CHD7Q9P2D1 2997 aa16.47■□□□□ 0.23
GPNMB-213ENST00000492512 DNAJC25-GNG10A0A024R161 153 aa16.47■□□□□ 0.23
GPNMB-213ENST00000492512 ARVCFO00192 962 aa16.47■□□□□ 0.23
GPNMB-213ENST00000492512 IGFBP4P22692 258 aa16.47■□□□□ 0.23
GPNMB-213ENST00000492512 RAB30Q15771 203 aa16.47■□□□□ 0.23
GPNMB-213ENST00000492512 CCDC144BQ3MJ40 725 aa16.47■□□□□ 0.23
GPNMB-213ENST00000492512 GNASQ5JWF2 1037 aa16.47■□□□□ 0.23
GPNMB-213ENST00000492512 ZNF467Q7Z7K2 595 aaPredicted RBP16.47■□□□□ 0.23
GPNMB-213ENST00000492512 KIF1BPQ96EK5 621 aa16.47■□□□□ 0.23
GPNMB-213ENST00000492512 NUP88Q99567 741 aaPredicted RBP16.47■□□□□ 0.23
GPNMB-213ENST00000492512 ABHD16BQ9H3Z7 469 aa16.47■□□□□ 0.23
GPNMB-213ENST00000492512 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.47■□□□□ 0.23
GPNMB-213ENST00000492512 RAPGEFL1Q9UHV5 662 aa16.47■□□□□ 0.23
GPNMB-213ENST00000492512 RIPK3Q9Y572 518 aa16.47■□□□□ 0.23
GPNMB-213ENST00000492512 CTDP1Q9Y5B0 961 aaPredicted RBP16.47■□□□□ 0.23
GPNMB-213ENST00000492512 SLC4A4Q9Y6R1 1079 aa16.47■□□□□ 0.23
GPNMB-213ENST00000492512 GJA9P57773 515 aa16.46■□□□□ 0.23
GPNMB-213ENST00000492512 ADGRE1Q14246 886 aa16.46■□□□□ 0.23
GPNMB-213ENST00000492512 FAM126BQ8IXS8 530 aa16.46■□□□□ 0.23
GPNMB-213ENST00000492512 CPXCR1Q8N123 301 aa16.46■□□□□ 0.23
GPNMB-213ENST00000492512 PRPF38AQ8NAV1 312 aaKnown RBP16.46■□□□□ 0.23
GPNMB-213ENST00000492512 UHRF1Q96T88 793 aaPredicted RBP16.46■□□□□ 0.23
GPNMB-213ENST00000492512 UPF3AQ9H1J1 476 aaKnown RBP16.46■□□□□ 0.23
GPNMB-213ENST00000492512 MTIF3Q9H2K0 278 aaKnown RBP16.46■□□□□ 0.23
GPNMB-213ENST00000492512 BOLA2Q9H3K6 86 aa16.46■□□□□ 0.23
GPNMB-213ENST00000492512 GREB1LQ9C091 1923 aaPredicted RBP16.46■□□□□ 0.23
GPNMB-213ENST00000492512 TCF20Q9UGU0 1960 aaKnown RBP16.46■□□□□ 0.22
GPNMB-213ENST00000492512 MYH4Q9Y623 1939 aa16.45■□□□□ 0.22
GPNMB-213ENST00000492512 CCER2I3L3R5 266 aa16.45■□□□□ 0.22
GPNMB-213ENST00000492512 ADCY6O43306 1168 aa16.45■□□□□ 0.22
GPNMB-213ENST00000492512 ZBED4O75132 1171 aa16.45■□□□□ 0.22
GPNMB-213ENST00000492512 CYP2C18P33260 490 aa16.45■□□□□ 0.22
GPNMB-213ENST00000492512 CTR9Q6PD62 1173 aa16.45■□□□□ 0.22
GPNMB-213ENST00000492512 ANKRD35Q8N283 1001 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms