RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 SNAP25P60880 206 aa8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 MAP2K5Q13163 448 aa8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 NECTIN1Q15223 517 aa8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 SEC23AQ15436 765 aa8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 HABP4Q5JVS0 413 aaKnown RBP8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 MAP3K21Q5TCX8 1036 aa8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 WDR78Q5VTH9 848 aa8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 BTNL9Q6UXG8 535 aa8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 NCAPG2Q86XI2 1143 aa8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 DGKHQ86XP1 1220 aa8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 CCAR1Q8IX12 1150 aaKnown RBP8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 ENAHQ8N8S7 591 aaPredicted RBP8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 SHISA4Q96DD7 197 aa8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 ZSCAN10Q96SZ4 725 aaPredicted RBP8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 TMEM106CQ9BVX2 250 aa8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 KRT23Q9C075 422 aa8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 MROH8Q9H579 483 aa8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 RAVER2Q9HCJ3 691 aaKnown RBP8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 BIN2Q9UBW5 565 aaPredicted RBP8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 MTMR7Q9Y216 660 aa8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 ZNF536O15090 1300 aa8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 PLXNB2O15031 1838 aa8.47□□□□□ -1.05
PDLIM1-204ENST00000492511 MYH8P13535 1937 aa8.46□□□□□ -1.05
PDLIM1-204ENST00000492511 STRNO43815 780 aa8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 ZBED4O75132 1171 aa8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 SLC25A27O95847 323 aa8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 HMGCRP04035 888 aa8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 PDHBP11177 359 aa8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 ADORA2AP29274 412 aa8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 SLC16A2P36021 539 aa8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 RGS2P41220 211 aa8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 NT5C2P49902 561 aa8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 STAT2P52630 851 aa8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 UBXN2AP68543 259 aa8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 CACNB2Q08289 660 aaPredicted RBP8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 FAM160B2Q86V87 743 aa8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 ABRAQ8N0Z2 381 aa8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 CHURC1Q8WUH1 139 aa8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 DCAF4Q8WV16 495 aa8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 RNF208Q9H0X6 261 aa8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 CNNM2Q9H8M5 875 aa8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 SENP2Q9HC62 589 aa8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 PAK6Q9NQU5 681 aaPredicted RBP8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 PRR12Q9ULL5 1215 aa8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 MGAMO43451 1857 aa8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 KIAA0100Q14667 2235 aaKnown RBP8.46□□□□□ -1.06
PDLIM1-204ENST00000492511 SLC27A2O14975 620 aa8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 CDC45O75419 566 aa8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 GJB1P08034 283 aa8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 TAL1P17542 331 aaPredicted RBP8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 GJA8P48165 433 aa8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 ANTXR2P58335 489 aa8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 ZNF543Q08ER8 600 aa8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 ZNF792Q3KQV3 632 aa8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 CCDC178Q5BJE1 867 aa8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 CREB3L3Q68CJ9 461 aa8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 SNRNP48Q6IEG0 339 aaKnown RBP8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 CHST3Q7LGC8 479 aa8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 IQCA1Q86XH1 822 aa8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 MB21D2Q8IYB1 491 aaPredicted RBP8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 CPXCR1Q8N123 301 aa8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 TRPV1Q8NER1 839 aa8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 AGBL1Q96MI9 1066 aa8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 APBA2Q99767 749 aa8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 TEX13BQ9BXU2 312 aa8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 CWC22Q9HCG8 908 aaKnown RBP8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 GPCPD1Q9NPB8 672 aa8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 IVNS1ABPQ9Y6Y0 642 aa8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 TNKSO95271 1327 aa8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 FRMPD2Q68DX3 1309 aaPredicted RBP8.45□□□□□ -1.06
PDLIM1-204ENST00000492511 DNAJC25-GNG10A0A024R161 153 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 SGPL1O95470 568 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 PGK2P07205 417 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 GOLGA8HP0CJ92 632 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 FDX1P10109 184 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 FCER1AP12319 257 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 PRKAR2AP13861 404 aaKnown RBP8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 ZKSCAN1P17029 563 aaPredicted RBP8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 CCND3P30281 292 aaPredicted RBP8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 CYP2C19P33261 490 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 OAZ1P54368 228 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 CCDC96Q2M329 555 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 SYDE2Q5VT97 1194 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 OLFML2BQ68BL8 750 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 KIAA1211Q6ZU35 1233 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 UBE2Q1Q7Z7E8 422 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 DPP9Q86TI2 863 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 TRMT44Q8IYL2 757 aaKnown RBP8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 PNMA1Q8ND90 353 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 IGDCC4Q8TDY8 1250 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 U2AF1L4Q8WU68 220 aaKnown RBP8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 MAML3Q96JK9 1138 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 FGD4Q96M96 766 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 DEFB118Q96PH6 123 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 MMP19Q99542 508 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 UBA5Q9GZZ9 404 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 CRISPLD2Q9H0B8 497 aa8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.44□□□□□ -1.06
PDLIM1-204ENST00000492511 RANBP17Q9H2T7 1088 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms