RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 TEKQ02763 1124 aa4.77□□□□□ -1.65
HMGB1P30-201ENST00000492455 DIEXFQ68CQ4 756 aaKnown RBP4.77□□□□□ -1.65
HMGB1P30-201ENST00000492455 NLGN1Q8N2Q7 840 aa4.77□□□□□ -1.65
HMGB1P30-201ENST00000492455 LINC01599Q8WXQ3 324 aa4.77□□□□□ -1.65
HMGB1P30-201ENST00000492455 TINF2Q9BSI4 451 aa4.77□□□□□ -1.65
HMGB1P30-201ENST00000492455 ASCC2Q9H1I8 757 aaPredicted RBP4.77□□□□□ -1.65
HMGB1P30-201ENST00000492455 OVOL3O00110 214 aa4.76□□□□□ -1.65
HMGB1P30-201ENST00000492455 GREM1O60565 184 aa4.76□□□□□ -1.65
HMGB1P30-201ENST00000492455 USP2O75604 605 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P30-201ENST00000492455 PF4P02776 101 aa4.76□□□□□ -1.65
HMGB1P30-201ENST00000492455 RPL10P27635 214 aaKnown RBP4.76□□□□□ -1.65
HMGB1P30-201ENST00000492455 KRTAP1-1Q07627 177 aa4.76□□□□□ -1.65
HMGB1P30-201ENST00000492455 CAMK2GQ13555 558 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P30-201ENST00000492455 FBXL19Q6PCT2 694 aa4.76□□□□□ -1.65
HMGB1P30-201ENST00000492455 CEP128Q6ZU80 1094 aa4.76□□□□□ -1.65
HMGB1P30-201ENST00000492455 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P30-201ENST00000492455 SSU72P8A0A1W2PR75 194 aa4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 MINDY4BA8MYZ0 360 aa4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 NRDCO43847 1150 aa4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 PRICKLE3O43900 615 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 MPOP05164 745 aa4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 PNLIPP16233 465 aa4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 GBP2P32456 591 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 ARL4AP40617 200 aa4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 MAGEA10P43363 369 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 KIR2DL1P43626 348 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 KIR2DL2P43627 348 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 RANGAP1P46060 587 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 CRKP46108 304 aa4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 CDK8P49336 464 aa4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 CHMP4BP1P59074 171 aa4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 YBX1P67809 324 aaKnown RBP4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 LMNB2Q03252 620 aa4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 FAM160A1Q05DH4 1040 aa4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 SEPT6Q14141 434 aa4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 ZFYVE27Q5T4F4 411 aa4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 BNC2Q6ZN30 1099 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 RNF111Q6ZNA4 994 aa4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 MCATQ8IVS2 390 aaKnown RBP4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 TMEFF1Q8IYR6 380 aa4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 ZNF654Q8IZM8 581 aa4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 CYB5D2Q8WUJ1 264 aa4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 RNF141Q8WVD5 230 aa4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 EAF1Q96JC9 268 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 C8orf37Q96NL8 207 aa4.75□□□□□ -1.65
HMGB1P30-201ENST00000492455 FAM221AA4D161 298 aa4.74□□□□□ -1.65
HMGB1P30-201ENST00000492455 FSHBP01225 129 aa4.74□□□□□ -1.65
HMGB1P30-201ENST00000492455 RLBP1P12271 317 aa4.74□□□□□ -1.65
HMGB1P30-201ENST00000492455 TNFRSF1AP19438 455 aa4.74□□□□□ -1.65
HMGB1P30-201ENST00000492455 EIF4A3P38919 411 aaKnown RBP4.74□□□□□ -1.65
HMGB1P30-201ENST00000492455 GJA8P48165 433 aa4.74□□□□□ -1.65
HMGB1P30-201ENST00000492455 YARSP54577 528 aaKnown RBP4.74□□□□□ -1.65
HMGB1P30-201ENST00000492455 ZC3H6P61129 1189 aaKnown RBP4.74□□□□□ -1.65
HMGB1P30-201ENST00000492455 PAK2Q13177 524 aa4.74□□□□□ -1.65
HMGB1P30-201ENST00000492455 PWP1Q13610 501 aa4.74□□□□□ -1.65
HMGB1P30-201ENST00000492455 TMC6Q7Z403 805 aa4.74□□□□□ -1.65
HMGB1P30-201ENST00000492455 WAPLQ7Z5K2 1190 aa4.74□□□□□ -1.65
HMGB1P30-201ENST00000492455 RELL1Q8IUW5 271 aa4.74□□□□□ -1.65
HMGB1P30-201ENST00000492455 FBXO27Q8NI29 283 aa4.74□□□□□ -1.65
HMGB1P30-201ENST00000492455 ZNF296Q8WUU4 475 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P30-201ENST00000492455 EBF1Q9UH73 591 aa4.74□□□□□ -1.65
HMGB1P30-201ENST00000492455 ADAM30Q9UKF2 790 aa4.74□□□□□ -1.65
HMGB1P30-201ENST00000492455 RBAK-RBAKDNI3L0D1 243 aa4.73□□□□□ -1.65
HMGB1P30-201ENST00000492455 GFRA2O00451 464 aa4.73□□□□□ -1.65
HMGB1P30-201ENST00000492455 BUB1BO60566 1050 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P30-201ENST00000492455 F13A1P00488 732 aa4.73□□□□□ -1.65
HMGB1P30-201ENST00000492455 SDHBP21912 280 aa4.73□□□□□ -1.65
HMGB1P30-201ENST00000492455 HMGA2P52926 109 aa4.73□□□□□ -1.65
HMGB1P30-201ENST00000492455 NAALADL2Q58DX5 795 aa4.73□□□□□ -1.65
HMGB1P30-201ENST00000492455 LDHDQ86WU2 507 aa4.73□□□□□ -1.65
HMGB1P30-201ENST00000492455 IGDCC3Q8IVU1 814 aa4.73□□□□□ -1.65
HMGB1P30-201ENST00000492455 SLC16A11Q8NCK7 471 aa4.73□□□□□ -1.65
HMGB1P30-201ENST00000492455 MAP6Q96JE9 813 aa4.73□□□□□ -1.65
HMGB1P30-201ENST00000492455 CCSER2Q9H7U1 834 aa4.73□□□□□ -1.65
HMGB1P30-201ENST00000492455 NOTOA8MTQ0 251 aa4.72□□□□□ -1.65
HMGB1P30-201ENST00000492455 SLURP1P55000 103 aa4.72□□□□□ -1.65
HMGB1P30-201ENST00000492455 ERVFRD-1P60508 538 aa4.72□□□□□ -1.65
HMGB1P30-201ENST00000492455 FAM196AQ6ZSG2 479 aa4.72□□□□□ -1.65
HMGB1P30-201ENST00000492455 CCDC84Q86UT8 332 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P30-201ENST00000492455 KIAA0825Q8IV33 1275 aa4.72□□□□□ -1.65
HMGB1P30-201ENST00000492455 GOLM1Q8NBJ4 401 aa4.72□□□□□ -1.65
HMGB1P30-201ENST00000492455 FAM13CQ8NE31 585 aa4.72□□□□□ -1.65
HMGB1P30-201ENST00000492455 RASGRP4Q8TDF6 673 aa4.72□□□□□ -1.65
HMGB1P30-201ENST00000492455 GATAD2BQ8WXI9 593 aa4.72□□□□□ -1.65
HMGB1P30-201ENST00000492455 SORCS2Q96PQ0 1159 aa4.72□□□□□ -1.65
HMGB1P30-201ENST00000492455 SPON2Q9BUD6 331 aa4.72□□□□□ -1.65
HMGB1P30-201ENST00000492455 G6PC3Q9BUM1 346 aa4.72□□□□□ -1.65
HMGB1P30-201ENST00000492455 NT5C1AQ9BXI3 368 aa4.72□□□□□ -1.65
HMGB1P30-201ENST00000492455 ASPNQ9BXN1 380 aa4.72□□□□□ -1.65
HMGB1P30-201ENST00000492455 LRRC3Q9BY71 257 aa4.72□□□□□ -1.65
HMGB1P30-201ENST00000492455 SMPD4Q9NXE4 827 aa4.72□□□□□ -1.65
HMGB1P30-201ENST00000492455 UBP1Q9NZI7 540 aa4.72□□□□□ -1.65
HMGB1P30-201ENST00000492455 TAF6LQ9Y6J9 622 aa4.72□□□□□ -1.65
HMGB1P30-201ENST00000492455 LRRN2O75325 713 aa4.71□□□□□ -1.66
HMGB1P30-201ENST00000492455 PFKLP17858 780 aa4.71□□□□□ -1.66
HMGB1P30-201ENST00000492455 CAP1Q01518 475 aa4.71□□□□□ -1.66
HMGB1P30-201ENST00000492455 RAB3GAP1Q15042 981 aa4.71□□□□□ -1.66
HMGB1P30-201ENST00000492455 SNAP47Q5SQN1 464 aa4.71□□□□□ -1.66
HMGB1P30-201ENST00000492455 SLC43A3Q8NBI5 491 aa4.71□□□□□ -1.66
HMGB1P30-201ENST00000492455 TP53I13Q8NBR0 393 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms