RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 FBXO38Q6PIJ6 1188 aa14.1□□□□□ -0.15
HMGN1-220ENST00000492280 DGKHQ86XP1 1220 aa14.1□□□□□ -0.15
HMGN1-220ENST00000492280 AMOTL1Q8IY63 956 aa14.1□□□□□ -0.15
HMGN1-220ENST00000492280 PIGSQ96S52 555 aa14.1□□□□□ -0.15
HMGN1-220ENST00000492280 MRPL44Q9H9J2 332 aaKnown RBP14.1□□□□□ -0.15
HMGN1-220ENST00000492280 TMEM260Q9NX78 707 aa14.1□□□□□ -0.15
HMGN1-220ENST00000492280 MYH1P12882 1939 aa14.1□□□□□ -0.15
HMGN1-220ENST00000492280 ADAMTSL1Q8N6G6 1762 aa14.1□□□□□ -0.15
HMGN1-220ENST00000492280 USP17L5A8MUK1 530 aa14.1□□□□□ -0.15
HMGN1-220ENST00000492280 RNF225M0QZC1 329 aaPredicted RBP14.1□□□□□ -0.15
HMGN1-220ENST00000492280 PES1O00541 588 aaKnown RBP14.1□□□□□ -0.15
HMGN1-220ENST00000492280 TFRCP02786 760 aaKnown RBP14.1□□□□□ -0.15
HMGN1-220ENST00000492280 PMS1P54277 932 aaKnown RBP14.1□□□□□ -0.15
HMGN1-220ENST00000492280 NR1I3Q14994 352 aa14.1□□□□□ -0.15
HMGN1-220ENST00000492280 DOK7Q18PE1 504 aa14.1□□□□□ -0.15
HMGN1-220ENST00000492280 SHROOM1Q2M3G4 852 aaPredicted RBP14.1□□□□□ -0.15
HMGN1-220ENST00000492280 NAALADL2Q58DX5 795 aa14.1□□□□□ -0.15
HMGN1-220ENST00000492280 JAKMIP3Q5VZ66 844 aa14.1□□□□□ -0.15
HMGN1-220ENST00000492280 MTERF4Q7Z6M4 381 aaKnown RBP14.1□□□□□ -0.15
HMGN1-220ENST00000492280 GPIHBP1Q8IV16 184 aa14.1□□□□□ -0.15
HMGN1-220ENST00000492280 IGSF22Q8N9C0 903 aa14.1□□□□□ -0.15
HMGN1-220ENST00000492280 TRIML1Q8N9V2 468 aa14.1□□□□□ -0.15
HMGN1-220ENST00000492280 IQUBQ8NA54 791 aa14.1□□□□□ -0.15
HMGN1-220ENST00000492280 TBC1D16Q8TBP0 767 aa14.1□□□□□ -0.15
HMGN1-220ENST00000492280 LZTFL1Q9NQ48 299 aa14.1□□□□□ -0.15
HMGN1-220ENST00000492280 A0A1B0GTH6 734 aa14.09□□□□□ -0.15
HMGN1-220ENST00000492280 FAM196BA6NMK8 535 aa14.09□□□□□ -0.15
HMGN1-220ENST00000492280 RAD21O60216 631 aa14.09□□□□□ -0.15
HMGN1-220ENST00000492280 SLU7O95391 586 aaKnown RBP14.09□□□□□ -0.15
HMGN1-220ENST00000492280 CASP14P31944 242 aa14.09□□□□□ -0.15
HMGN1-220ENST00000492280 RHBDL3P58872 404 aa14.09□□□□□ -0.15
HMGN1-220ENST00000492280 HPS3Q969F9 1004 aa14.09□□□□□ -0.15
HMGN1-220ENST00000492280 GJA10Q969M2 543 aa14.09□□□□□ -0.15
HMGN1-220ENST00000492280 ZNF219Q9P2Y4 722 aaPredicted RBP14.09□□□□□ -0.15
HMGN1-220ENST00000492280 BIN2Q9UBW5 565 aaPredicted RBP14.09□□□□□ -0.15
HMGN1-220ENST00000492280 PCDHAC2Q9Y5I4 1007 aa14.09□□□□□ -0.15
HMGN1-220ENST00000492280 ETF1P62495 437 aaKnown RBP14.09□□□□□ -0.15
HMGN1-220ENST00000492280 ST5P78524 1137 aa14.09□□□□□ -0.15
HMGN1-220ENST00000492280 SPATA1Q5VX52 437 aa14.09□□□□□ -0.15
HMGN1-220ENST00000492280 UBR3Q6ZT12 1888 aa14.09□□□□□ -0.15
HMGN1-220ENST00000492280 CCNT1O60563 726 aaKnown RBP14.08□□□□□ -0.15
HMGN1-220ENST00000492280 ABL1P00519 1130 aa14.08□□□□□ -0.15
HMGN1-220ENST00000492280 ERCC3P19447 782 aa14.08□□□□□ -0.15
HMGN1-220ENST00000492280 FXR1P51114 621 aaKnown RBP eCLIP14.08□□□□□ -0.15
HMGN1-220ENST00000492280 CACNB3P54284 484 aa14.08□□□□□ -0.15
HMGN1-220ENST00000492280 GNG11P61952 73 aa14.08□□□□□ -0.15
HMGN1-220ENST00000492280 ATP2B2Q01814 1243 aa14.08□□□□□ -0.15
HMGN1-220ENST00000492280 KRT31Q15323 416 aa14.08□□□□□ -0.15
HMGN1-220ENST00000492280 RAD9BQ6WBX8 426 aa14.08□□□□□ -0.15
HMGN1-220ENST00000492280 NELFBQ8WX92 580 aa14.08□□□□□ -0.15
HMGN1-220ENST00000492280 COA7Q96BR5 231 aa14.08□□□□□ -0.15
HMGN1-220ENST00000492280 QTRT2Q9H974 415 aaKnown RBP14.08□□□□□ -0.15
HMGN1-220ENST00000492280 DDX4Q9NQI0 724 aaKnown RBP14.08□□□□□ -0.15
HMGN1-220ENST00000492280 NKRFO15226 690 aaKnown RBP eCLIP14.08□□□□□ -0.16
HMGN1-220ENST00000492280 RPN1P04843 607 aaKnown RBP14.08□□□□□ -0.16
HMGN1-220ENST00000492280 PRCPP42785 496 aa14.08□□□□□ -0.16
HMGN1-220ENST00000492280 SPATA31A6Q5VVP1 1343 aa14.08□□□□□ -0.16
HMGN1-220ENST00000492280 GSDMAQ96QA5 445 aa14.08□□□□□ -0.16
HMGN1-220ENST00000492280 ZSWIM4Q9H7M6 989 aa14.08□□□□□ -0.16
HMGN1-220ENST00000492280 KCNQ5Q9NR82 932 aa14.08□□□□□ -0.16
HMGN1-220ENST00000492280 ADD3Q9UEY8 706 aaKnown RBP14.08□□□□□ -0.16
HMGN1-220ENST00000492280 DAGLAQ9Y4D2 1042 aa14.08□□□□□ -0.16
HMGN1-220ENST00000492280 ROBO3Q96MS0 1386 aa14.07□□□□□ -0.16
HMGN1-220ENST00000492280 PALM3A6NDB9 673 aaPredicted RBP14.07□□□□□ -0.16
HMGN1-220ENST00000492280 M0R2N6 131 aa14.07□□□□□ -0.16
HMGN1-220ENST00000492280 ARHGAP6O43182 974 aa14.07□□□□□ -0.16
HMGN1-220ENST00000492280 ERCC5P28715 1186 aaPredicted RBP14.07□□□□□ -0.16
HMGN1-220ENST00000492280 GSTO1P78417 241 aa14.07□□□□□ -0.16
HMGN1-220ENST00000492280 CDKAL1Q5VV42 579 aa14.07□□□□□ -0.16
HMGN1-220ENST00000492280 ELOA2Q8IYF1 753 aaPredicted RBP14.07□□□□□ -0.16
HMGN1-220ENST00000492280 GPCPD1Q9NPB8 672 aa14.07□□□□□ -0.16
HMGN1-220ENST00000492280 DISC1Q9NRI5 854 aa14.07□□□□□ -0.16
HMGN1-220ENST00000492280 BARHL2Q9NY43 387 aa14.07□□□□□ -0.16
HMGN1-220ENST00000492280 BMP15O95972 392 aa14.07□□□□□ -0.16
HMGN1-220ENST00000492280 AKR1B1P15121 316 aa14.07□□□□□ -0.16
HMGN1-220ENST00000492280 CALML3P27482 149 aa14.07□□□□□ -0.16
HMGN1-220ENST00000492280 CRY2Q49AN0 593 aa14.07□□□□□ -0.16
HMGN1-220ENST00000492280 MSL1Q68DK7 614 aa14.07□□□□□ -0.16
HMGN1-220ENST00000492280 DTHD1Q6ZMT9 781 aa14.07□□□□□ -0.16
HMGN1-220ENST00000492280 CERS5Q8N5B7 392 aa14.07□□□□□ -0.16
HMGN1-220ENST00000492280 CARD6Q9BX69 1037 aa14.07□□□□□ -0.16
HMGN1-220ENST00000492280 GPR75-ASB3A0A0A6YYF3 556 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 SMCO2A6NFE2 343 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 GYPCP04921 128 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 PARP1P09874 1014 aaKnown RBP14.06□□□□□ -0.16
HMGN1-220ENST00000492280 PPP4CP60510 307 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 C16orf86Q6ZW13 317 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 POTEDQ86YR6 584 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 ACRBPQ8NEB7 543 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 ZMYND15Q9H091 742 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 KCND1Q9NSA2 647 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.06□□□□□ -0.161e-14■■■□□ 15.4
HMGN1-220ENST00000492280 N4BP3O15049 544 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 UBA7P41226 1012 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 TECP42680 631 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 PAK1Q13153 545 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 TXNRD1Q16881 649 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 DPP8Q6V1X1 898 aaPredicted RBP14.06□□□□□ -0.16
HMGN1-220ENST00000492280 ERO1AQ96HE7 468 aa14.06□□□□□ -0.16
HMGN1-220ENST00000492280 CCDC34Q96HJ3 373 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms