RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 SLC4A3P48751 1232 aa17.76■□□□□ 0.43
TOM1-215ENST00000491987 HAND2P61296 217 aa17.76■□□□□ 0.43
TOM1-215ENST00000491987 KCTD2Q14681 263 aa17.76■□□□□ 0.43
TOM1-215ENST00000491987 RRP12Q5JTH9 1297 aaKnown RBP17.76■□□□□ 0.43
TOM1-215ENST00000491987 PPP4R3BQ5MIZ7 849 aa17.76■□□□□ 0.43
TOM1-215ENST00000491987 CPXCR1Q8N123 301 aa17.76■□□□□ 0.43
TOM1-215ENST00000491987 TRPV1Q8NER1 839 aa17.76■□□□□ 0.43
TOM1-215ENST00000491987 NBPF3Q9H094 633 aa17.76■□□□□ 0.43
TOM1-215ENST00000491987 C11orf49Q9H6J7 331 aa17.76■□□□□ 0.43
TOM1-215ENST00000491987 FEM1BQ9UK73 627 aa17.76■□□□□ 0.43
TOM1-215ENST00000491987 EVI5O60447 810 aa17.75■□□□□ 0.43
TOM1-215ENST00000491987 FGRP09769 529 aa17.75■□□□□ 0.43
TOM1-215ENST00000491987 CYBAP13498 195 aa17.75■□□□□ 0.43
TOM1-215ENST00000491987 MFAP1P55081 439 aaKnown RBP17.75■□□□□ 0.43
TOM1-215ENST00000491987 CWC27Q6UX04 472 aaKnown RBP17.75■□□□□ 0.43
TOM1-215ENST00000491987 MAML3Q96JK9 1138 aa17.75■□□□□ 0.43
TOM1-215ENST00000491987 DDX20Q9UHI6 824 aaKnown RBP17.75■□□□□ 0.43
TOM1-215ENST00000491987 NR2E3Q9Y5X4 410 aa17.75■□□□□ 0.43
TOM1-215ENST00000491987 FRMPD3Q5JV73 1810 aa17.75■□□□□ 0.43
TOM1-215ENST00000491987 TMEM232C9JQI7 657 aa17.74■□□□□ 0.43
TOM1-215ENST00000491987 IKQ13123 557 aaPredicted RBP17.74■□□□□ 0.43
TOM1-215ENST00000491987 HABP4Q5JVS0 413 aaKnown RBP17.74■□□□□ 0.43
TOM1-215ENST00000491987 RASGRP2Q7LDG7 609 aa17.74■□□□□ 0.43
TOM1-215ENST00000491987 GMCL1Q96IK5 515 aa17.74■□□□□ 0.43
TOM1-215ENST00000491987 RAVER2Q9HCJ3 691 aaKnown RBP17.74■□□□□ 0.43
TOM1-215ENST00000491987 COLQQ9Y215 455 aaPredicted RBP17.74■□□□□ 0.43
TOM1-215ENST00000491987 MTMR7Q9Y216 660 aa17.74■□□□□ 0.43
TOM1-215ENST00000491987 RIPK3Q9Y572 518 aa17.74■□□□□ 0.43
TOM1-215ENST00000491987 HIP1O00291 1037 aa17.73■□□□□ 0.43
TOM1-215ENST00000491987 ATP2A1O14983 1001 aa17.73■□□□□ 0.43
TOM1-215ENST00000491987 SLC34A2O95436 690 aa17.73■□□□□ 0.43
TOM1-215ENST00000491987 MCCP23508 829 aa17.73■□□□□ 0.43
TOM1-215ENST00000491987 SLC1A4P43007 532 aa17.73■□□□□ 0.43
TOM1-215ENST00000491987 STAT2P52630 851 aa17.73■□□□□ 0.43
TOM1-215ENST00000491987 ZNF792Q3KQV3 632 aa17.73■□□□□ 0.43
TOM1-215ENST00000491987 PRAMEF19Q5SWL8 479 aa17.73■□□□□ 0.43
TOM1-215ENST00000491987 KCTD1Q719H9 257 aa17.73■□□□□ 0.43
TOM1-215ENST00000491987 TBC1D10CQ8IV04 446 aa17.73■□□□□ 0.43
TOM1-215ENST00000491987 SLC38A10Q9HBR0 1119 aa17.73■□□□□ 0.43
TOM1-215ENST00000491987 PFASO15067 1338 aa17.72■□□□□ 0.43
TOM1-215ENST00000491987 ALPK3Q96L96 1907 aa17.72■□□□□ 0.43
TOM1-215ENST00000491987 MSCO60682 206 aa17.72■□□□□ 0.43
TOM1-215ENST00000491987 ANO1Q5XXA6 986 aa17.72■□□□□ 0.43
TOM1-215ENST00000491987 CHRDL2Q6WN34 429 aa17.72■□□□□ 0.43
TOM1-215ENST00000491987 FAM160B2Q86V87 743 aa17.72■□□□□ 0.43
TOM1-215ENST00000491987 COL6A1P12109 1028 aa17.71■□□□□ 0.43
TOM1-215ENST00000491987 GSPT1P15170 499 aaKnown RBP17.71■□□□□ 0.43
TOM1-215ENST00000491987 NOVP48745 357 aa17.71■□□□□ 0.43
TOM1-215ENST00000491987 AKNAD1Q5T1N1 836 aa17.71■□□□□ 0.43
TOM1-215ENST00000491987 TTC22Q5TAA0 569 aa17.71■□□□□ 0.43
TOM1-215ENST00000491987 MFSD6Q6ZSS7 791 aa17.71■□□□□ 0.43
TOM1-215ENST00000491987 C7orf61Q8IZ16 206 aa17.71■□□□□ 0.43
TOM1-215ENST00000491987 CHURC1Q8WUH1 139 aa17.71■□□□□ 0.43
TOM1-215ENST00000491987 STAG1Q8WVM7 1258 aa17.71■□□□□ 0.43
TOM1-215ENST00000491987 DDX11Q96FC9 970 aa17.71■□□□□ 0.43
TOM1-215ENST00000491987 ZNF213O14771 459 aa17.7■□□□□ 0.42
TOM1-215ENST00000491987 SEPT4O43236 478 aa17.7■□□□□ 0.42
TOM1-215ENST00000491987 OAZ1P54368 228 aa17.7■□□□□ 0.42
TOM1-215ENST00000491987 CCDC96Q2M329 555 aa17.7■□□□□ 0.42
TOM1-215ENST00000491987 RCSD1Q6JBY9 416 aa17.7■□□□□ 0.42
TOM1-215ENST00000491987 TINF2Q9BSI4 451 aa17.7■□□□□ 0.42
TOM1-215ENST00000491987 RNF41Q9H4P4 317 aaPredicted RBP17.7■□□□□ 0.42
TOM1-215ENST00000491987 TCP11L1Q9NUJ3 509 aa17.7■□□□□ 0.42
TOM1-215ENST00000491987 DIS3Q9Y2L1 958 aaKnown RBP17.7■□□□□ 0.42
TOM1-215ENST00000491987 LAMA4Q16363 1823 aa17.7■□□□□ 0.42
TOM1-215ENST00000491987 NEDD4P46934 1319 aa17.7■□□□□ 0.42
TOM1-215ENST00000491987 PLXNA1Q9UIW2 1896 aa17.69■□□□□ 0.42
TOM1-215ENST00000491987 ZNFX1Q9P2E3 1918 aaKnown RBP17.69■□□□□ 0.42
TOM1-215ENST00000491987 FDX1P10109 184 aa17.69■□□□□ 0.42
TOM1-215ENST00000491987 TOP1P11387 765 aaKnown RBP17.69■□□□□ 0.42
TOM1-215ENST00000491987 PCP11498 1178 aaKnown RBP17.69■□□□□ 0.42
TOM1-215ENST00000491987 SNAP25P60880 206 aa17.69■□□□□ 0.42
TOM1-215ENST00000491987 DCAF4Q8WV16 495 aa17.69■□□□□ 0.42
TOM1-215ENST00000491987 TMEM47Q9BQJ4 181 aa17.69■□□□□ 0.42
TOM1-215ENST00000491987 HOMER2Q9NSB8 354 aa17.69■□□□□ 0.42
TOM1-215ENST00000491987 FBXO40Q9UH90 709 aa17.69■□□□□ 0.42
TOM1-215ENST00000491987 DNAJC25-GNG10A0A024R161 153 aa17.68■□□□□ 0.42
TOM1-215ENST00000491987 PLA2G6O60733 806 aa17.68■□□□□ 0.42
TOM1-215ENST00000491987 GJC2Q5T442 439 aaPredicted RBP17.68■□□□□ 0.42
TOM1-215ENST00000491987 CCDC174Q6PII3 467 aa17.68■□□□□ 0.42
TOM1-215ENST00000491987 ANKRD35Q8N283 1001 aa17.68■□□□□ 0.42
TOM1-215ENST00000491987 CHST13Q8NET6 341 aa17.68■□□□□ 0.42
TOM1-215ENST00000491987 AGBL1Q96MI9 1066 aa17.68■□□□□ 0.42
TOM1-215ENST00000491987 DSCC1Q9BVC3 393 aa17.68■□□□□ 0.42
TOM1-215ENST00000491987 IL25Q9H293 177 aa17.68■□□□□ 0.42
TOM1-215ENST00000491987 PRR12Q9ULL5 1215 aa17.68■□□□□ 0.42
TOM1-215ENST00000491987 ZMYND8Q9ULU4 1186 aaPredicted RBP17.68■□□□□ 0.42
TOM1-215ENST00000491987 ZNF536O15090 1300 aa17.68■□□□□ 0.42
TOM1-215ENST00000491987 DNM1LO00429 736 aa17.67■□□□□ 0.42
TOM1-215ENST00000491987 MYCNP04198 464 aaPredicted RBP17.67■□□□□ 0.42
TOM1-215ENST00000491987 TAL1P17542 331 aaPredicted RBP17.67■□□□□ 0.42
TOM1-215ENST00000491987 LRRC26Q2I0M4 334 aa17.67■□□□□ 0.42
TOM1-215ENST00000491987 TTBK2Q6IQ55 1244 aa17.67■□□□□ 0.42
TOM1-215ENST00000491987 ESR2Q92731 530 aa17.67■□□□□ 0.42
TOM1-215ENST00000491987 ZKSCAN3Q9BRR0 538 aa17.67■□□□□ 0.42
TOM1-215ENST00000491987 SENP6Q9GZR1 1112 aaPredicted RBP17.67■□□□□ 0.42
TOM1-215ENST00000491987 RNF146Q9NTX7 359 aa17.67■□□□□ 0.42
TOM1-215ENST00000491987 NRBP1Q9UHY1 535 aa17.67■□□□□ 0.42
TOM1-215ENST00000491987 FRMPD2Q68DX3 1309 aaPredicted RBP17.67■□□□□ 0.42
TOM1-215ENST00000491987 SYN1P17600 705 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms