RNA–Protein interactions for RNA: ENST00000491142.1

HPS4-215, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-215ENST00000491142 C1orf53Q5VUE5 145 aa10.23□□□□□ -0.77
HPS4-215ENST00000491142 TSHZ3Q63HK5 1081 aa10.23□□□□□ -0.77
HPS4-215ENST00000491142 MIGA1Q8NAN2 632 aa10.23□□□□□ -0.77
HPS4-215ENST00000491142 RILPL2Q969X0 211 aa10.23□□□□□ -0.77
HPS4-215ENST00000491142 GPATCH3Q96I76 525 aa10.23□□□□□ -0.77
HPS4-215ENST00000491142 RNPC3Q96LT9 517 aaKnown RBP10.23□□□□□ -0.77
HPS4-215ENST00000491142 DBNDD2Q9BQY9 259 aa10.23□□□□□ -0.77
HPS4-215ENST00000491142 SERPINB13Q9UIV8 391 aa10.23□□□□□ -0.77
HPS4-215ENST00000491142 FOCADQ5VW36 1801 aa10.22□□□□□ -0.77
HPS4-215ENST00000491142 TMEM265A0A087WTH1 108 aa10.22□□□□□ -0.77
HPS4-215ENST00000491142 RIOK3O14730 519 aaKnown RBP10.22□□□□□ -0.77
HPS4-215ENST00000491142 STRNO43815 780 aa10.22□□□□□ -0.77
HPS4-215ENST00000491142 ST18O60284 1047 aa10.22□□□□□ -0.77
HPS4-215ENST00000491142 ERCC3P19447 782 aa10.22□□□□□ -0.77
HPS4-215ENST00000491142 GUCY1A2P33402 732 aa10.22□□□□□ -0.77
HPS4-215ENST00000491142 SHMT1P34896 483 aa10.22□□□□□ -0.77
HPS4-215ENST00000491142 USP5P45974 858 aa10.22□□□□□ -0.77
HPS4-215ENST00000491142 COG2Q14746 738 aa10.22□□□□□ -0.77
HPS4-215ENST00000491142 TNNI3KQ59H18 835 aa10.22□□□□□ -0.77
HPS4-215ENST00000491142 CCDC158Q5M9N0 1113 aa10.22□□□□□ -0.77
HPS4-215ENST00000491142 SPATC1LQ9H0A9 340 aa10.22□□□□□ -0.77
HPS4-215ENST00000491142 BCL11AQ9H165 835 aa10.22□□□□□ -0.77
HPS4-215ENST00000491142 EHD4Q9H223 541 aa10.22□□□□□ -0.77
HPS4-215ENST00000491142 TACC3Q9Y6A5 838 aa10.22□□□□□ -0.77
HPS4-215ENST00000491142 FPGT-TNNI3KV9GXZ4 949 aa10.22□□□□□ -0.77
HPS4-215ENST00000491142 XIRP2A4UGR9 3374 aa10.22□□□□□ -0.77
HPS4-215ENST00000491142 A0A1W2PRG0 241 aa10.21□□□□□ -0.77
HPS4-215ENST00000491142 CLTBP09497 229 aa10.21□□□□□ -0.77
HPS4-215ENST00000491142 DNAJB2P25686 324 aa10.21□□□□□ -0.77
HPS4-215ENST00000491142 MCM4P33991 863 aa10.21□□□□□ -0.77
HPS4-215ENST00000491142 MCM2P49736 904 aa10.21□□□□□ -0.77
HPS4-215ENST00000491142 PLCD1P51178 756 aa10.21□□□□□ -0.77
HPS4-215ENST00000491142 SEPT2Q15019 361 aa10.21□□□□□ -0.77
HPS4-215ENST00000491142 KIAA1755Q5JYT7 1200 aa10.21□□□□□ -0.77
HPS4-215ENST00000491142 SPRYD3Q8NCJ5 442 aa10.21□□□□□ -0.77
HPS4-215ENST00000491142 MAML3Q96JK9 1138 aa10.21□□□□□ -0.77
HPS4-215ENST00000491142 CABP5Q9NP86 173 aa10.21□□□□□ -0.77
HPS4-215ENST00000491142 ECHDC1Q9NTX5 307 aa10.21□□□□□ -0.77
HPS4-215ENST00000491142 HOXC10Q9NYD6 342 aa10.21□□□□□ -0.77
HPS4-215ENST00000491142 PHF24Q9UPV7 400 aa10.21□□□□□ -0.77
HPS4-215ENST00000491142 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.2□□□□□ -0.78
HPS4-215ENST00000491142 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.2□□□□□ -0.78
HPS4-215ENST00000491142 KIAA0355O15063 1070 aa10.2□□□□□ -0.78
HPS4-215ENST00000491142 SGSM2O43147 1006 aa10.2□□□□□ -0.78
HPS4-215ENST00000491142 PQBP1O60828 265 aaKnown RBP10.2□□□□□ -0.78
HPS4-215ENST00000491142 IDH1O75874 414 aaKnown RBP10.2□□□□□ -0.78
HPS4-215ENST00000491142 PGK1P00558 417 aa10.2□□□□□ -0.78
HPS4-215ENST00000491142 IFIT2P09913 472 aaKnown RBP10.2□□□□□ -0.78
HPS4-215ENST00000491142 RAG1P15918 1043 aa10.2□□□□□ -0.78
HPS4-215ENST00000491142 FPGSQ05932 587 aa10.2□□□□□ -0.78
HPS4-215ENST00000491142 PLS1Q14651 629 aa10.2□□□□□ -0.78
HPS4-215ENST00000491142 CHD9Q3L8U1 2897 aa10.2□□□□□ -0.78
HPS4-215ENST00000491142 CLEC17AQ6ZS10 378 aa10.2□□□□□ -0.78
HPS4-215ENST00000491142 TTC6Q86TZ1 520 aa10.2□□□□□ -0.78
HPS4-215ENST00000491142 NCAPG2Q86XI2 1143 aa10.2□□□□□ -0.78
HPS4-215ENST00000491142 MAGEB6Q8N7X4 407 aa10.2□□□□□ -0.78
HPS4-215ENST00000491142 SHCBP1Q8NEM2 672 aa10.2□□□□□ -0.78
HPS4-215ENST00000491142 PPM1EQ8WY54 764 aa10.2□□□□□ -0.78
HPS4-215ENST00000491142 ZNF512BQ96KM6 892 aaPredicted RBP10.2□□□□□ -0.78
HPS4-215ENST00000491142 TANGO6Q9C0B7 1094 aa10.2□□□□□ -0.78
HPS4-215ENST00000491142 ZNF576Q9H609 170 aa10.2□□□□□ -0.78
HPS4-215ENST00000491142 GPR108Q9NPR9 543 aa10.2□□□□□ -0.78
HPS4-215ENST00000491142 XPNPEP3Q9NQH7 507 aa10.2□□□□□ -0.78
HPS4-215ENST00000491142 TMEM39AQ9NV64 488 aa10.2□□□□□ -0.78
HPS4-215ENST00000491142 MYO5AQ9Y4I1 1855 aaKnown RBP10.2□□□□□ -0.78
HPS4-215ENST00000491142 RAD50Q92878 1312 aa10.19□□□□□ -0.78
HPS4-215ENST00000491142 A0A1W2PQ45 241 aaPredicted RBP10.19□□□□□ -0.78
HPS4-215ENST00000491142 A0A1W2PQY0 241 aa10.19□□□□□ -0.78
HPS4-215ENST00000491142 MPHOSPH10O00566 681 aaKnown RBP10.19□□□□□ -0.78
HPS4-215ENST00000491142 RARBP10826 455 aa10.19□□□□□ -0.78
HPS4-215ENST00000491142 TAL1P17542 331 aaPredicted RBP10.19□□□□□ -0.78
HPS4-215ENST00000491142 PTMSP20962 102 aa10.19□□□□□ -0.78
HPS4-215ENST00000491142 FAAP100Q0VG06 881 aa10.19□□□□□ -0.78
HPS4-215ENST00000491142 ABRAQ8N0Z2 381 aa10.19□□□□□ -0.78
HPS4-215ENST00000491142 TIFAQ96CG3 184 aa10.19□□□□□ -0.78
HPS4-215ENST00000491142 EVI5LQ96CN4 794 aa10.19□□□□□ -0.78
HPS4-215ENST00000491142 MROH8Q9H579 483 aa10.19□□□□□ -0.78
HPS4-215ENST00000491142 SLC5A4Q9NY91 659 aa10.19□□□□□ -0.78
HPS4-215ENST00000491142 TLR7Q9NYK1 1049 aaKnown RBP10.19□□□□□ -0.78
HPS4-215ENST00000491142 DBNLQ9UJU6 430 aaKnown RBP10.19□□□□□ -0.78
HPS4-215ENST00000491142 REV3LO60673 3130 aa10.19□□□□□ -0.78
HPS4-215ENST00000491142 MYH1P12882 1939 aa10.19□□□□□ -0.78
HPS4-215ENST00000491142 ZNF236Q9UL36 1845 aa10.19□□□□□ -0.78
HPS4-215ENST00000491142 DDX11L8A8MPP1 907 aa10.18□□□□□ -0.78
HPS4-215ENST00000491142 GRXCR1A8MXD5 290 aa10.18□□□□□ -0.78
HPS4-215ENST00000491142 HIP1O00291 1037 aa10.18□□□□□ -0.78
HPS4-215ENST00000491142 IGSF3O75054 1194 aa10.18□□□□□ -0.78
HPS4-215ENST00000491142 POLR3DP05423 398 aaPredicted RBP10.18□□□□□ -0.78
HPS4-215ENST00000491142 PGK2P07205 417 aa10.18□□□□□ -0.78
HPS4-215ENST00000491142 HSP90AA1P07900 732 aaKnown RBP10.18□□□□□ -0.78
HPS4-215ENST00000491142 FCER1AP12319 257 aa10.18□□□□□ -0.78
HPS4-215ENST00000491142 HSPA4P34932 840 aa10.18□□□□□ -0.78
HPS4-215ENST00000491142 PBX2P40425 430 aa10.18□□□□□ -0.78
HPS4-215ENST00000491142 GABPAQ06546 454 aa10.18□□□□□ -0.78
HPS4-215ENST00000491142 RNF180Q86T96 592 aa10.18□□□□□ -0.78
HPS4-215ENST00000491142 AACSQ86V21 672 aa10.18□□□□□ -0.78
HPS4-215ENST00000491142 RUFY2Q8WXA3 655 aa10.18□□□□□ -0.78
HPS4-215ENST00000491142 LENG1Q96BZ8 264 aaPredicted RBP10.18□□□□□ -0.78
HPS4-215ENST00000491142 ATG4CQ96DT6 458 aa10.18□□□□□ -0.78
HPS4-215ENST00000491142 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms