RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 RIOX1Q9H6W3 641 aa15.99■□□□□ 0.15
SMPD4-219ENST00000491128 BARHL2Q9NY43 387 aa15.99■□□□□ 0.15
SMPD4-219ENST00000491128 MYH8P13535 1937 aa15.99■□□□□ 0.15
SMPD4-219ENST00000491128 A0A087WWV3 80 aa15.99■□□□□ 0.15
SMPD4-219ENST00000491128 GOLGA6L3A6NEY3 463 aa15.99■□□□□ 0.15
SMPD4-219ENST00000491128 TMEM232C9JQI7 657 aa15.99■□□□□ 0.15
SMPD4-219ENST00000491128 FSIP1Q8NA03 581 aa15.99■□□□□ 0.15
SMPD4-219ENST00000491128 ZKSCAN4Q969J2 545 aaPredicted RBP15.99■□□□□ 0.15
SMPD4-219ENST00000491128 MKL1Q969V6 931 aa15.99■□□□□ 0.15
SMPD4-219ENST00000491128 SMCO2A6NFE2 343 aa15.98■□□□□ 0.15
SMPD4-219ENST00000491128 SLC39A14Q15043 492 aa15.98■□□□□ 0.15
SMPD4-219ENST00000491128 BLIDQ8IZY5 108 aa15.98■□□□□ 0.15
SMPD4-219ENST00000491128 RNF214Q8ND24 703 aa15.98■□□□□ 0.15
SMPD4-219ENST00000491128 TNFRSF25Q93038 417 aa15.98■□□□□ 0.15
SMPD4-219ENST00000491128 TMEM260Q9NX78 707 aa15.98■□□□□ 0.15
SMPD4-219ENST00000491128 PHF20L1A8MW92 1017 aa15.98■□□□□ 0.15
SMPD4-219ENST00000491128 TNFAIP1Q13829 316 aa15.98■□□□□ 0.15
SMPD4-219ENST00000491128 LZTS2Q9BRK4 669 aa15.98■□□□□ 0.15
SMPD4-219ENST00000491128 PANK2Q9BZ23 570 aa15.98■□□□□ 0.15
SMPD4-219ENST00000491128 BRMS1Q9HCU9 246 aa15.98■□□□□ 0.15
SMPD4-219ENST00000491128 BIN2Q9UBW5 565 aaPredicted RBP15.98■□□□□ 0.15
SMPD4-219ENST00000491128 ARFGEF1Q9Y6D6 1849 aa15.98■□□□□ 0.15
SMPD4-219ENST00000491128 NDUFA8P51970 172 aa15.97■□□□□ 0.15
SMPD4-219ENST00000491128 FAM83BQ5T0W9 1011 aa15.97■□□□□ 0.15
SMPD4-219ENST00000491128 MCM7P33993 719 aa15.97■□□□□ 0.15
SMPD4-219ENST00000491128 AXDND1Q5T1B0 1012 aaPredicted RBP15.97■□□□□ 0.15
SMPD4-219ENST00000491128 CCDC183Q5T5S1 534 aa15.97■□□□□ 0.15
SMPD4-219ENST00000491128 JAKMIP3Q5VZ66 844 aa15.97■□□□□ 0.15
SMPD4-219ENST00000491128 PCDHA6Q9UN73 950 aa15.97■□□□□ 0.15
SMPD4-219ENST00000491128 PCDHA4Q9UN74 947 aa15.97■□□□□ 0.15
SMPD4-219ENST00000491128 PCDHA8Q9Y5H6 950 aa15.97■□□□□ 0.15
SMPD4-219ENST00000491128 MYH6P13533 1939 aa15.96■□□□□ 0.15
SMPD4-219ENST00000491128 YEATS4O95619 227 aa15.96■□□□□ 0.15
SMPD4-219ENST00000491128 INF2Q27J81 1249 aa15.96■□□□□ 0.15
SMPD4-219ENST00000491128 USH1GQ495M9 461 aa15.96■□□□□ 0.15
SMPD4-219ENST00000491128 ATL3Q6DD88 541 aa15.96■□□□□ 0.15
SMPD4-219ENST00000491128 KCNG4Q8TDN1 519 aa15.96■□□□□ 0.15
SMPD4-219ENST00000491128 ZNF341Q9BYN7 854 aa15.96■□□□□ 0.15
SMPD4-219ENST00000491128 SNW1Q13573 536 aaKnown RBP15.96■□□□□ 0.15
SMPD4-219ENST00000491128 UBE2SQ16763 222 aa15.96■□□□□ 0.15
SMPD4-219ENST00000491128 RILPL1Q5EBL4 403 aa15.96■□□□□ 0.15
SMPD4-219ENST00000491128 GPATCH4Q5T3I0 446 aaKnown RBP15.96■□□□□ 0.15
SMPD4-219ENST00000491128 FBXO28Q9NVF7 368 aa15.96■□□□□ 0.15
SMPD4-219ENST00000491128 ADM5C9JUS6 153 aa15.95■□□□□ 0.14
SMPD4-219ENST00000491128 TBC1D12O60347 775 aa15.95■□□□□ 0.14
SMPD4-219ENST00000491128 QRICH1Q2TAL8 776 aa15.95■□□□□ 0.14
SMPD4-219ENST00000491128 ADALQ6DHV7 355 aa15.95■□□□□ 0.14
SMPD4-219ENST00000491128 USP49Q70CQ1 688 aa15.95■□□□□ 0.14
SMPD4-219ENST00000491128 SYAP1Q96A49 352 aaPredicted RBP15.95■□□□□ 0.14
SMPD4-219ENST00000491128 UIMC1Q96RL1 719 aa15.95■□□□□ 0.14
SMPD4-219ENST00000491128 FSD2A1L4K1 749 aa15.95■□□□□ 0.14
SMPD4-219ENST00000491128 BMP3P12645 472 aa15.95■□□□□ 0.14
SMPD4-219ENST00000491128 SHC4Q6S5L8 630 aa15.95■□□□□ 0.14
SMPD4-219ENST00000491128 RBSNQ9H1K0 784 aa15.95■□□□□ 0.14
SMPD4-219ENST00000491128 ARHGEF10LQ9HCE6 1279 aa15.95■□□□□ 0.14
SMPD4-219ENST00000491128 COL2A1P02458 1487 aaPredicted RBP15.95■□□□□ 0.14
SMPD4-219ENST00000491128 ZNF445P59923 1031 aa15.94■□□□□ 0.14
SMPD4-219ENST00000491128 KIFC2Q96AC6 838 aa15.94■□□□□ 0.14
SMPD4-219ENST00000491128 WRNIP1Q96S55 665 aa15.94■□□□□ 0.14
SMPD4-219ENST00000491128 FEZ1Q99689 392 aa15.94■□□□□ 0.14
SMPD4-219ENST00000491128 NUP62CLQ9H1M0 184 aa15.94■□□□□ 0.14
SMPD4-219ENST00000491128 TMX2Q9Y320 296 aa15.94■□□□□ 0.14
SMPD4-219ENST00000491128 TRIM75PA6NK02 468 aa15.94■□□□□ 0.14
SMPD4-219ENST00000491128 XRCC6P12956 609 aaKnown RBP eCLIP15.94■□□□□ 0.14
SMPD4-219ENST00000491128 LMOD1P29536 600 aaPredicted RBP15.94■□□□□ 0.14
SMPD4-219ENST00000491128 CDC37Q16543 378 aaPredicted RBP15.94■□□□□ 0.14
SMPD4-219ENST00000491128 TTC38Q5R3I4 469 aa15.94■□□□□ 0.14
SMPD4-219ENST00000491128 LRSAM1Q6UWE0 723 aa15.94■□□□□ 0.14
SMPD4-219ENST00000491128 MRPS27Q92552 414 aaKnown RBP15.94■□□□□ 0.14
SMPD4-219ENST00000491128 MYH4Q9Y623 1939 aa15.94■□□□□ 0.14
SMPD4-219ENST00000491128 PNMA6FA0A0J9YX94 578 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 CCDC194A0A1B0GVG4 234 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 M0R2N6 131 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 ZBTB5O15062 677 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 CCDC73Q6ZRK6 1079 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 GMCL1P1Q8NEA9 526 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 DCAF4Q8WV16 495 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 ZMYND12Q9H0C1 365 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 TNMDQ9H2S6 317 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 USP17L15C9J2P7 530 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 USP17L13C9JLJ4 530 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 USP17L11C9JVI0 530 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 USP17L18D6R9N7 530 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 USP17L22D6RA61 530 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 USP17L17D6RBQ6 530 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 USP17L19D6RCP7 530 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 USP17L20D6RJB6 530 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 ASNSP08243 561 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 PFKFB1P16118 471 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 CALML3P27482 149 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 MAP3K10Q02779 954 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 USP17L24Q0WX57 530 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 PTGDRQ13258 359 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 USP17L6PQ6QN14 398 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 ENGASEQ8NFI3 743 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 CCDC148Q8NFR7 591 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 GRPEL1Q9HAV7 217 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 SH3GLB2Q9NR46 395 aa15.93■□□□□ 0.14
SMPD4-219ENST00000491128 GREB1LQ9C091 1923 aaPredicted RBP15.93■□□□□ 0.14
SMPD4-219ENST00000491128 CDC25AP30304 524 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms