RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 TTBK2Q6IQ55 1244 aa21.62■■□□□ 1.05
MCF2L-230ENST00000491028 CATSPERGQ6ZRH7 1159 aa21.62■■□□□ 1.05
MCF2L-230ENST00000491028 SMARCC2Q8TAQ2 1214 aa21.62■■□□□ 1.05
MCF2L-230ENST00000491028 RNF26Q9BY78 433 aaPredicted RBP21.62■■□□□ 1.05
MCF2L-230ENST00000491028 RIOX1Q9H6W3 641 aa21.62■■□□□ 1.05
MCF2L-230ENST00000491028 RBM27Q9P2N5 1060 aaKnown RBP21.62■■□□□ 1.05
MCF2L-230ENST00000491028 SLC45A1Q9Y2W3 748 aa21.62■■□□□ 1.05
MCF2L-230ENST00000491028 RLFQ13129 1914 aa21.62■■□□□ 1.05
MCF2L-230ENST00000491028 PTPDC1A2A3K4 754 aa21.61■■□□□ 1.05
MCF2L-230ENST00000491028 CTDNEP1O95476 244 aa21.61■■□□□ 1.05
MCF2L-230ENST00000491028 HSP90AA1P07900 732 aaKnown RBP21.61■■□□□ 1.05
MCF2L-230ENST00000491028 HMGN5P82970 282 aaKnown RBP21.61■■□□□ 1.05
MCF2L-230ENST00000491028 TREML2Q5T2D2 321 aa21.61■■□□□ 1.05
MCF2L-230ENST00000491028 SYDE2Q5VT97 1194 aa21.61■■□□□ 1.05
MCF2L-230ENST00000491028 PAXIP1Q6ZW49 1069 aaPredicted RBP21.61■■□□□ 1.05
MCF2L-230ENST00000491028 NBPF11Q86T75 865 aa21.61■■□□□ 1.05
MCF2L-230ENST00000491028 TRIM22Q8IYM9 498 aa21.61■■□□□ 1.05
MCF2L-230ENST00000491028 BRI3BPQ8WY22 251 aa21.61■■□□□ 1.05
MCF2L-230ENST00000491028 SLF1Q9BQI6 1058 aa21.61■■□□□ 1.05
MCF2L-230ENST00000491028 UBA5Q9GZZ9 404 aa21.61■■□□□ 1.05
MCF2L-230ENST00000491028 CYTH3O43739 400 aa21.6■■□□□ 1.05
MCF2L-230ENST00000491028 FMNL1O95466 1100 aaPredicted RBP21.6■■□□□ 1.05
MCF2L-230ENST00000491028 SLC16A2P36021 539 aa21.6■■□□□ 1.05
MCF2L-230ENST00000491028 INHBEP58166 350 aa21.6■■□□□ 1.05
MCF2L-230ENST00000491028 SSRP1Q08945 709 aaKnown RBP21.6■■□□□ 1.05
MCF2L-230ENST00000491028 GPAT2Q6NUI2 795 aa21.6■■□□□ 1.05
MCF2L-230ENST00000491028 ANKRD23Q86SG2 305 aa21.6■■□□□ 1.05
MCF2L-230ENST00000491028 CMTR1Q8N1G2 835 aaKnown RBP21.6■■□□□ 1.05
MCF2L-230ENST00000491028 PRPF38AQ8NAV1 312 aaKnown RBP21.6■■□□□ 1.05
MCF2L-230ENST00000491028 DAXXQ9UER7 740 aaPredicted RBP21.6■■□□□ 1.05
MCF2L-230ENST00000491028 PPP1R9AQ9ULJ8 1098 aa21.6■■□□□ 1.05
MCF2L-230ENST00000491028 PRR12Q9ULL5 1215 aa21.6■■□□□ 1.05
MCF2L-230ENST00000491028 CEP350Q5VT06 3117 aa21.6■■□□□ 1.05
MCF2L-230ENST00000491028 A0A0G2JMZ2 1700 aa21.6■■□□□ 1.05
MCF2L-230ENST00000491028 PRPF3O43395 683 aaKnown RBP21.59■■□□□ 1.05
MCF2L-230ENST00000491028 FLOT1O75955 427 aa21.59■■□□□ 1.05
MCF2L-230ENST00000491028 FDX1P10109 184 aa21.59■■□□□ 1.05
MCF2L-230ENST00000491028 AKAP17AQ02040 695 aaKnown RBP21.59■■□□□ 1.05
MCF2L-230ENST00000491028 SREBF2Q12772 1141 aa21.59■■□□□ 1.05
MCF2L-230ENST00000491028 NOGQ13253 232 aa21.59■■□□□ 1.05
MCF2L-230ENST00000491028 COG2Q14746 738 aa21.59■■□□□ 1.05
MCF2L-230ENST00000491028 SLC35G1Q2M3R5 365 aa21.59■■□□□ 1.05
MCF2L-230ENST00000491028 CYP4F22Q6NT55 531 aa21.59■■□□□ 1.05
MCF2L-230ENST00000491028 ADGRF4Q8IZF3 695 aa21.59■■□□□ 1.05
MCF2L-230ENST00000491028 CCDC82Q8N4S0 544 aa21.59■■□□□ 1.05
MCF2L-230ENST00000491028 PHKBQ93100 1093 aa21.59■■□□□ 1.05
MCF2L-230ENST00000491028 SLC26A6Q9BXS9 759 aa21.59■■□□□ 1.05
MCF2L-230ENST00000491028 CPVLQ9H3G5 476 aa21.59■■□□□ 1.05
MCF2L-230ENST00000491028 ZCCHC17Q9NP64 241 aaKnown RBP21.59■■□□□ 1.05
MCF2L-230ENST00000491028 FBXO28Q9NVF7 368 aa21.59■■□□□ 1.05
MCF2L-230ENST00000491028 PNMA3Q9UL41 463 aa21.59■■□□□ 1.05
MCF2L-230ENST00000491028 SMC3Q9UQE7 1217 aa21.59■■□□□ 1.05
MCF2L-230ENST00000491028 JAK2O60674 1132 aa21.58■■□□□ 1.05
MCF2L-230ENST00000491028 OSBPP22059 807 aa21.58■■□□□ 1.05
MCF2L-230ENST00000491028 DSG3P32926 999 aa21.58■■□□□ 1.05
MCF2L-230ENST00000491028 IRX3P78415 501 aaPredicted RBP21.58■■□□□ 1.05
MCF2L-230ENST00000491028 KIFC2Q96AC6 838 aa21.58■■□□□ 1.05
MCF2L-230ENST00000491028 MTMR8Q96EF0 704 aa21.58■■□□□ 1.05
MCF2L-230ENST00000491028 RRP36Q96EU6 259 aaKnown RBP21.58■■□□□ 1.05
MCF2L-230ENST00000491028 CAPNS2Q96L46 248 aa21.58■■□□□ 1.05
MCF2L-230ENST00000491028 JMJD4Q9H9V9 463 aa21.58■■□□□ 1.05
MCF2L-230ENST00000491028 KIF3AQ9Y496 699 aa21.58■■□□□ 1.05
MCF2L-230ENST00000491028 BTBD19C9JJ37 291 aa21.57■■□□□ 1.04
MCF2L-230ENST00000491028 DEXIO95424 95 aa21.57■■□□□ 1.04
MCF2L-230ENST00000491028 REM2Q8IYK8 340 aaPredicted RBP21.57■■□□□ 1.04
MCF2L-230ENST00000491028 WASF1Q92558 559 aa21.57■■□□□ 1.04
MCF2L-230ENST00000491028 RANBP17Q9H2T7 1088 aaKnown RBP21.57■■□□□ 1.04
MCF2L-230ENST00000491028 HOXC10Q9NYD6 342 aa21.57■■□□□ 1.04
MCF2L-230ENST00000491028 ORC3Q9UBD5 711 aaPredicted RBP21.57■■□□□ 1.04
MCF2L-230ENST00000491028 SEC63Q9UGP8 760 aaKnown RBP21.57■■□□□ 1.04
MCF2L-230ENST00000491028 THSD7BQ9C0I4 1608 aa21.57■■□□□ 1.04
MCF2L-230ENST00000491028 GTF3C2Q8WUA4 911 aaPredicted RBP21.56■■□□□ 1.04
MCF2L-230ENST00000491028 IPO9Q96P70 1041 aaKnown RBP21.56■■□□□ 1.04
MCF2L-230ENST00000491028 ASCC2Q9H1I8 757 aaPredicted RBP21.56■■□□□ 1.04
MCF2L-230ENST00000491028 VAT1LQ9HCJ6 419 aa21.56■■□□□ 1.04
MCF2L-230ENST00000491028 SPDYE16A6NNV3 312 aaPredicted RBP21.55■■□□□ 1.04
MCF2L-230ENST00000491028 hCG_1984214I3L0E3 225 aa21.55■■□□□ 1.04
MCF2L-230ENST00000491028 PDHXO00330 501 aa21.55■■□□□ 1.04
MCF2L-230ENST00000491028 ZBTB5O15062 677 aa21.55■■□□□ 1.04
MCF2L-230ENST00000491028 GJB2P29033 226 aa21.55■■□□□ 1.04
MCF2L-230ENST00000491028 CDC37Q16543 378 aaPredicted RBP21.55■■□□□ 1.04
MCF2L-230ENST00000491028 LBX2Q6XYB7 198 aa21.55■■□□□ 1.04
MCF2L-230ENST00000491028 HOMER1Q86YM7 354 aa21.55■■□□□ 1.04
MCF2L-230ENST00000491028 ZNF713Q8N859 430 aaPredicted RBP21.55■■□□□ 1.04
MCF2L-230ENST00000491028 FAM184AQ8NB25 1140 aa21.55■■□□□ 1.04
MCF2L-230ENST00000491028 DDX11Q96FC9 970 aa21.55■■□□□ 1.04
MCF2L-230ENST00000491028 PIGSQ96S52 555 aa21.55■■□□□ 1.04
MCF2L-230ENST00000491028 PNMA2Q9UL42 364 aa21.55■■□□□ 1.04
MCF2L-230ENST00000491028 ADAMTS5Q9UNA0 930 aa21.55■■□□□ 1.04
MCF2L-230ENST00000491028 V9GY48 417 aaPredicted RBP21.55■■□□□ 1.04
MCF2L-230ENST00000491028 COL11A1P12107 1806 aaPredicted RBP21.55■■□□□ 1.04
MCF2L-230ENST00000491028 BAZ2BQ9UIF8 2168 aaKnown RBP21.54■■□□□ 1.04
MCF2L-230ENST00000491028 PNMA6FA0A0J9YX94 578 aa21.54■■□□□ 1.04
MCF2L-230ENST00000491028 ZBED4O75132 1171 aa21.54■■□□□ 1.04
MCF2L-230ENST00000491028 SCG2P13521 617 aa21.54■■□□□ 1.04
MCF2L-230ENST00000491028 FDPSP14324 419 aaKnown RBP21.54■■□□□ 1.04
MCF2L-230ENST00000491028 KIF23Q02241 960 aaPredicted RBP21.54■■□□□ 1.04
MCF2L-230ENST00000491028 TRAF1Q13077 416 aa21.54■■□□□ 1.04
MCF2L-230ENST00000491028 GRM1Q13255 1194 aa21.54■■□□□ 1.04
MCF2L-230ENST00000491028 PFKFB3Q16875 520 aaPredicted RBP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms