RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 SCN10AQ9Y5Y9 1956 aa10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 TOP1P11387 765 aaKnown RBP10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 FUT2Q10981 343 aa10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 MAP2K5Q13163 448 aa10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 ZSCAN10Q96SZ4 725 aaPredicted RBP10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 SLF1Q9BQI6 1058 aa10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 MROH8Q9H579 483 aa10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 LY9Q9HBG7 655 aa10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 CTAGE5O15320 804 aa10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 STRNO43815 780 aa10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 PPP1R11O60927 126 aaPredicted RBP10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 MTFR1Q15390 333 aa10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 SPICE1Q8N0Z3 855 aa10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 PRPF38AQ8NAV1 312 aaKnown RBP10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 U3KPZ7 1027 aaPredicted RBP10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 TSPY3P0CV98 308 aa10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 TSPY8P0CW00 308 aa10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 FDX1P10109 184 aa10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 CCL14Q16627 93 aa10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 CCSAPQ6IQ19 270 aaPredicted RBP10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 PLEKHH3Q7Z736 793 aa10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 RASEFQ8IZ41 740 aa10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 APBA2Q99767 749 aa10.87□□□□□ -0.67
SUPT20H-220ENST00000490716 CDH23Q9H251 3354 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 GRK4P32298 578 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 HSPA4P34932 840 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 PPP4R3BQ5MIZ7 849 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 RGS22Q8NE09 1264 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 DDRGK1Q96HY6 314 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 MKNK2Q9HBH9 465 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 DIAPH3Q9NSV4 1193 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 RBM8AQ9Y5S9 174 aaKnown RBP10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 ZNF213O14771 459 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 MFSD6Q6ZSS7 791 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 AMOTL1Q8IY63 956 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 LRRC47Q8N1G4 583 aaKnown RBP10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 FAM133AQ8N9E0 248 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 SH3TC2Q8TF17 1288 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 RIOX1Q9H6W3 641 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 PRR12Q9ULL5 1215 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 CYTH3O43739 400 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 SLC25A27O95847 323 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 ERCC3P19447 782 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 EDNRBP24530 442 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 HAND2P61296 217 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 ZYXQ15942 572 aaKnown RBP10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 SGMS1Q86VZ5 419 aa10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 TRMT44Q8IYL2 757 aaKnown RBP10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 ZNF444Q8N0Y2 327 aaPredicted RBP10.86□□□□□ -0.67
SUPT20H-220ENST00000490716 MYH7BA7E2Y1 1941 aa10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 ADCY6O43306 1168 aa10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 BMP3P12645 472 aa10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 CACNB2Q08289 660 aaPredicted RBP10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 MSL3Q8N5Y2 521 aaKnown RBP10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 TRIM34Q9BYJ4 488 aa10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 TANGO6Q9C0B7 1094 aa10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 CNNM2Q9H8M5 875 aa10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 NRBP1Q9UHY1 535 aa10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 B4E1Z4 1266 aa10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 MPHOSPH10O00566 681 aaKnown RBP10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 GJB1P08034 283 aa10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 ZNF865P0CJ78 1059 aaPredicted RBP10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 IRX3P78415 501 aaPredicted RBP10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 CREB3L3Q68CJ9 461 aa10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 SLFN13Q68D06 897 aa10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 TTBK2Q6IQ55 1244 aa10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 MAML3Q96JK9 1138 aa10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 RNF41Q9H4P4 317 aaPredicted RBP10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 FAM217BQ9NTX9 383 aaPredicted RBP10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 CTNNA3Q9UI47 895 aa10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 FAM160B2Q86V87 743 aa10.85□□□□□ -0.67
SUPT20H-220ENST00000490716 TNKSO95271 1327 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 RBM47A0AV96 593 aaKnown RBP10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 SH2B2O14492 632 aaPredicted RBP10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 SNAI1O95863 264 aaPredicted RBP10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 HMGCRP04035 888 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 INHAP05111 366 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 ICAM1P05362 532 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 SLC3A2P08195 630 aaKnown RBP10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 SMARCA1P28370 1054 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 KRT23Q9C075 422 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 UNC93B1Q9H1C4 597 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 SPTBN5Q9NRC6 3674 aaKnown RBP10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 SYNGAP1Q96PV0 1343 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 ADCY3O60266 1144 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 CCL5P13501 91 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 COPB2P35606 906 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 GRM4Q14833 912 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 ADCK5Q3MIX3 580 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 NBPF11Q86T75 865 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 EYSQ5T1H1 3165 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 KDM4AO75164 1064 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 APPP05067 770 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 HOXD10P28358 340 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 ADORA2AP29274 412 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 LIFRP42702 1097 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 IMMTQ16891 758 aaKnown RBP10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 SMCR8Q8TEV9 937 aaPredicted RBP10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 ESR2Q92731 530 aa10.84□□□□□ -0.67
SUPT20H-220ENST00000490716 ELNP15502 786 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms