RNA–Protein interactions for RNA: ENST00000490600.6

MCOLN3-206, Transcript of mucolipin 3, humanhuman

TSL 1 (best)

Gene MCOLN3, Length 2,777 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCOLN3-206ENST00000490600 NOVP48745 357 aa15.75■□□□□ 0.11
MCOLN3-206ENST00000490600 KARSQ15046 597 aaKnown RBP15.75■□□□□ 0.11
MCOLN3-206ENST00000490600 SHROOM1Q2M3G4 852 aaPredicted RBP15.75■□□□□ 0.11
MCOLN3-206ENST00000490600 TRIML1Q8N9V2 468 aa15.75■□□□□ 0.11
MCOLN3-206ENST00000490600 SPZ1Q9BXG8 430 aa15.75■□□□□ 0.11
MCOLN3-206ENST00000490600 ZNF287Q9HBT7 754 aa15.75■□□□□ 0.11
MCOLN3-206ENST00000490600 MYH8P13535 1937 aa15.75■□□□□ 0.11
MCOLN3-206ENST00000490600 SCN9AQ15858 1988 aa15.74■□□□□ 0.11
MCOLN3-206ENST00000490600 TOP1P11387 765 aaKnown RBP15.74■□□□□ 0.11
MCOLN3-206ENST00000490600 SFPQP23246 707 aaKnown RBP eCLIP15.74■□□□□ 0.11
MCOLN3-206ENST00000490600 GTF2F1P35269 517 aaKnown RBP eCLIP15.74■□□□□ 0.11
MCOLN3-206ENST00000490600 CDC42EP5Q6NZY7 148 aa15.74■□□□□ 0.11
MCOLN3-206ENST00000490600 NYAP1Q6ZVC0 841 aa15.74■□□□□ 0.11
MCOLN3-206ENST00000490600 TMC4Q7Z404 712 aa15.74■□□□□ 0.11
MCOLN3-206ENST00000490600 USP40Q9NVE5 1235 aa15.74■□□□□ 0.11
MCOLN3-206ENST00000490600 ZNF219Q9P2Y4 722 aaPredicted RBP15.74■□□□□ 0.11
MCOLN3-206ENST00000490600 PLSCR1O15162 318 aa15.74■□□□□ 0.11
MCOLN3-206ENST00000490600 PDHBP11177 359 aa15.74■□□□□ 0.11
MCOLN3-206ENST00000490600 NT5C2P49902 561 aa15.74■□□□□ 0.11
MCOLN3-206ENST00000490600 CACNB3P54284 484 aa15.74■□□□□ 0.11
MCOLN3-206ENST00000490600 NAPAP54920 295 aa15.74■□□□□ 0.11
MCOLN3-206ENST00000490600 APOBEC3HQ6NTF7 200 aaKnown RBP15.74■□□□□ 0.11
MCOLN3-206ENST00000490600 ZNF710Q8N1W2 664 aa15.74■□□□□ 0.11
MCOLN3-206ENST00000490600 DAGLBQ8NCG7 672 aa15.74■□□□□ 0.11
MCOLN3-206ENST00000490600 PLIN2Q99541 437 aa15.74■□□□□ 0.11
MCOLN3-206ENST00000490600 MTMR4Q9NYA4 1195 aa15.74■□□□□ 0.11
MCOLN3-206ENST00000490600 UTRNP46939 3433 aa15.73■□□□□ 0.11
MCOLN3-206ENST00000490600 PPP1R3GB7ZBB8 358 aa15.73■□□□□ 0.11
MCOLN3-206ENST00000490600 CCDC150Q8NCX0 1101 aa15.73■□□□□ 0.11
MCOLN3-206ENST00000490600 ZNF622Q969S3 477 aaKnown RBP eCLIP15.73■□□□□ 0.11
MCOLN3-206ENST00000490600 NAALADL2Q58DX5 795 aa15.73■□□□□ 0.11
MCOLN3-206ENST00000490600 APTXQ7Z2E3 356 aaKnown RBP15.73■□□□□ 0.11
MCOLN3-206ENST00000490600 ZNF592Q92610 1267 aa15.73■□□□□ 0.11
MCOLN3-206ENST00000490600 ZMYND12Q9H0C1 365 aa15.73■□□□□ 0.11
MCOLN3-206ENST00000490600 FAM196BA6NMK8 535 aa15.72■□□□□ 0.11
MCOLN3-206ENST00000490600 SHMT1P34896 483 aa15.72■□□□□ 0.11
MCOLN3-206ENST00000490600 TMEM260Q9NX78 707 aa15.72■□□□□ 0.11
MCOLN3-206ENST00000490600 IGKV6D-41A0A0C4DH26 115 aa15.72■□□□□ 0.11
MCOLN3-206ENST00000490600 SMCO2A6NFE2 343 aa15.72■□□□□ 0.11
MCOLN3-206ENST00000490600 ARL6IP4Q66PJ3 421 aaKnown RBP15.72■□□□□ 0.11
MCOLN3-206ENST00000490600 IQUBQ8NA54 791 aa15.72■□□□□ 0.11
MCOLN3-206ENST00000490600 CCDC148Q8NFR7 591 aa15.72■□□□□ 0.11
MCOLN3-206ENST00000490600 MASTLQ96GX5 879 aa15.72■□□□□ 0.11
MCOLN3-206ENST00000490600 PARP3Q9Y6F1 533 aa15.72■□□□□ 0.11
MCOLN3-206ENST00000490600 SLX4Q8IY92 1834 aa15.72■□□□□ 0.11
MCOLN3-206ENST00000490600 GSDMAQ96QA5 445 aa15.71■□□□□ 0.11
MCOLN3-206ENST00000490600 PLIN4Q96Q06 1357 aa15.71■□□□□ 0.11
MCOLN3-206ENST00000490600 TEX33O43247 280 aa15.71■□□□□ 0.11
MCOLN3-206ENST00000490600 CBFA2T2O43439 604 aa15.71■□□□□ 0.11
MCOLN3-206ENST00000490600 CDK11BP21127 795 aaKnown RBP15.71■□□□□ 0.11
MCOLN3-206ENST00000490600 ALDH1B1P30837 517 aa15.71■□□□□ 0.11
MCOLN3-206ENST00000490600 CEP135Q66GS9 1140 aa15.71■□□□□ 0.11
MCOLN3-206ENST00000490600 KIAA0825Q8IV33 1275 aa15.71■□□□□ 0.11
MCOLN3-206ENST00000490600 COA7Q96BR5 231 aa15.71■□□□□ 0.11
MCOLN3-206ENST00000490600 LZTS2Q9BRK4 669 aa15.71■□□□□ 0.11
MCOLN3-206ENST00000490600 DNAJC18Q9H819 358 aa15.71■□□□□ 0.11
MCOLN3-206ENST00000490600 GPCPD1Q9NPB8 672 aa15.71■□□□□ 0.11
MCOLN3-206ENST00000490600 BIN2Q9UBW5 565 aaPredicted RBP15.71■□□□□ 0.11
MCOLN3-206ENST00000490600 DACH1Q9UI36 760 aa15.71■□□□□ 0.11
MCOLN3-206ENST00000490600 SYNRGQ9UMZ2 1314 aa15.71■□□□□ 0.11
MCOLN3-206ENST00000490600 ERCC5P28715 1186 aaPredicted RBP15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 CHRNA5P30532 468 aa15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 PDE6BP35913 854 aa15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 LONP1P36776 959 aaKnown RBP15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 LETM2Q2VYF4 491 aa15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 TMEM139Q8IV31 216 aa15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 RRP36Q96EU6 259 aaKnown RBP15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 PPP1R13BQ96KQ4 1090 aa15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 SERPINB13Q9UIV8 391 aa15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 CTNND2Q9UQB3 1225 aa15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 MAPK8IP1Q9UQF2 711 aa15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 SIPA1L1O43166 1804 aa15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 TBX2Q13207 712 aaPredicted RBP15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 JAKMIP3Q5VZ66 844 aa15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 TTBK2Q6IQ55 1244 aa15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 TMX1Q9H3N1 280 aa15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 RIOX1Q9H6W3 641 aa15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 DISC1Q9NRI5 854 aa15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 EDIL3O43854 480 aa15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 TCP10Q12799 353 aa15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 NAA30Q147X3 362 aaPredicted RBP15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 PTPN14Q15678 1187 aa15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 DTHD1Q6ZMT9 781 aa15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 GDAQ9Y2T3 454 aa15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 SUGT1Q9Y2Z0 365 aa15.7■□□□□ 0.1
MCOLN3-206ENST00000490600 CCNT1O60563 726 aaKnown RBP15.69■□□□□ 0.1
MCOLN3-206ENST00000490600 PPP1R11O60927 126 aaPredicted RBP15.69■□□□□ 0.1
MCOLN3-206ENST00000490600 CRKP46108 304 aa15.69■□□□□ 0.1
MCOLN3-206ENST00000490600 GALNT17Q6IS24 598 aa15.69■□□□□ 0.1
MCOLN3-206ENST00000490600 C2CD5Q86YS7 1000 aa15.69■□□□□ 0.1
MCOLN3-206ENST00000490600 KCND1Q9NSA2 647 aa15.69■□□□□ 0.1
MCOLN3-206ENST00000490600 ZNF646O15015 1829 aaPredicted RBP15.69■□□□□ 0.1
MCOLN3-206ENST00000490600 MYO1BO43795 1136 aa15.69■□□□□ 0.1
MCOLN3-206ENST00000490600 STAT6P42226 847 aa15.69■□□□□ 0.1
MCOLN3-206ENST00000490600 ADKP55263 362 aaKnown RBP15.69■□□□□ 0.1
MCOLN3-206ENST00000490600 HSP90AA2PQ14568 343 aaPredicted RBP15.69■□□□□ 0.1
MCOLN3-206ENST00000490600 NR1I3Q14994 352 aa15.69■□□□□ 0.1
MCOLN3-206ENST00000490600 SPATA1Q5VX52 437 aa15.69■□□□□ 0.1
MCOLN3-206ENST00000490600 TEKT1Q969V4 418 aa15.69■□□□□ 0.1
MCOLN3-206ENST00000490600 SEC63Q9UGP8 760 aaKnown RBP15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms