RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 RIOX1Q9H6W3 641 aa15.35■□□□□ 0.05
SNX12-205ENST00000490561 SEC63Q9UGP8 760 aaKnown RBP15.35■□□□□ 0.05
SNX12-205ENST00000490561 PNMA2Q9UL42 364 aa15.35■□□□□ 0.05
SNX12-205ENST00000490561 SLC45A1Q9Y2W3 748 aa15.35■□□□□ 0.05
SNX12-205ENST00000490561 MYPNQ86TC9 1320 aa15.35■□□□□ 0.05
SNX12-205ENST00000490561 CNTNAP5Q8WYK1 1306 aa15.35■□□□□ 0.05
SNX12-205ENST00000490561 MANSC4A6NHS7 340 aaPredicted RBP15.34■□□□□ 0.05
SNX12-205ENST00000490561 hCG_1984214I3L0E3 225 aa15.34■□□□□ 0.05
SNX12-205ENST00000490561 CTDNEP1O95476 244 aa15.34■□□□□ 0.05
SNX12-205ENST00000490561 SLC10A3P09131 477 aa15.34■□□□□ 0.05
SNX12-205ENST00000490561 HOXA7P31268 230 aaPredicted RBP15.34■□□□□ 0.05
SNX12-205ENST00000490561 GJA5P36382 358 aa15.34■□□□□ 0.05
SNX12-205ENST00000490561 KIAA1755Q5JYT7 1200 aa15.34■□□□□ 0.05
SNX12-205ENST00000490561 GADL1Q6ZQY3 521 aa15.34■□□□□ 0.05
SNX12-205ENST00000490561 ZNF713Q8N859 430 aaPredicted RBP15.34■□□□□ 0.05
SNX12-205ENST00000490561 PRPF38AQ8NAV1 312 aaKnown RBP15.34■□□□□ 0.05
SNX12-205ENST00000490561 NUP88Q99567 741 aaPredicted RBP15.34■□□□□ 0.05
SNX12-205ENST00000490561 SLF1Q9BQI6 1058 aa15.34■□□□□ 0.05
SNX12-205ENST00000490561 ORC3Q9UBD5 711 aaPredicted RBP15.34■□□□□ 0.05
SNX12-205ENST00000490561 AGTPBP1Q9UPW5 1226 aa15.34■□□□□ 0.05
SNX12-205ENST00000490561 LOC285556D6RIA3 1793 aa15.34■□□□□ 0.05
SNX12-205ENST00000490561 FLOT1O75955 427 aa15.33■□□□□ 0.04
SNX12-205ENST00000490561 XBP1P17861 261 aa15.33■□□□□ 0.04
SNX12-205ENST00000490561 GJB2P29033 226 aa15.33■□□□□ 0.04
SNX12-205ENST00000490561 INHBEP58166 350 aa15.33■□□□□ 0.04
SNX12-205ENST00000490561 CATSPERGQ6ZRH7 1159 aa15.33■□□□□ 0.04
SNX12-205ENST00000490561 RASGRP2Q7LDG7 609 aa15.33■□□□□ 0.04
SNX12-205ENST00000490561 NBPF11Q86T75 865 aa15.33■□□□□ 0.04
SNX12-205ENST00000490561 GTF3C2Q8WUA4 911 aaPredicted RBP15.33■□□□□ 0.04
SNX12-205ENST00000490561 HOXC10Q9NYD6 342 aa15.33■□□□□ 0.04
SNX12-205ENST00000490561 PNMA3Q9UL41 463 aa15.33■□□□□ 0.04
SNX12-205ENST00000490561 CCL15-CCL14A0A0B4J2E2 113 aa15.32■□□□□ 0.04
SNX12-205ENST00000490561 PNMA6FA0A0J9YX94 578 aa15.32■□□□□ 0.04
SNX12-205ENST00000490561 JAK2O60674 1132 aa15.32■□□□□ 0.04
SNX12-205ENST00000490561 OSBPP22059 807 aa15.32■□□□□ 0.04
SNX12-205ENST00000490561 COG2Q14746 738 aa15.32■□□□□ 0.04
SNX12-205ENST00000490561 CCL15Q16663 113 aa15.32■□□□□ 0.04
SNX12-205ENST00000490561 TTBK2Q6IQ55 1244 aa15.32■□□□□ 0.04
SNX12-205ENST00000490561 ANKRD23Q86SG2 305 aa15.32■□□□□ 0.04
SNX12-205ENST00000490561 REM2Q8IYK8 340 aaPredicted RBP15.32■□□□□ 0.04
SNX12-205ENST00000490561 ADGRF4Q8IZF3 695 aa15.32■□□□□ 0.04
SNX12-205ENST00000490561 CCDC82Q8N4S0 544 aa15.32■□□□□ 0.04
SNX12-205ENST00000490561 CCDC12Q8WUD4 166 aaPredicted RBP15.32■□□□□ 0.04
SNX12-205ENST00000490561 PHKBQ93100 1093 aa15.32■□□□□ 0.04
SNX12-205ENST00000490561 MTMR8Q96EF0 704 aa15.32■□□□□ 0.04
SNX12-205ENST00000490561 UBA5Q9GZZ9 404 aa15.32■□□□□ 0.04
SNX12-205ENST00000490561 ZCCHC17Q9NP64 241 aaKnown RBP15.32■□□□□ 0.04
SNX12-205ENST00000490561 PPP1R9AQ9ULJ8 1098 aa15.32■□□□□ 0.04
SNX12-205ENST00000490561 CTDP1Q9Y5B0 961 aaPredicted RBP15.32■□□□□ 0.04
SNX12-205ENST00000490561 V9GY48 417 aaPredicted RBP15.32■□□□□ 0.04
SNX12-205ENST00000490561 TESPA1A2RU30 521 aaPredicted RBP15.31■□□□□ 0.04
SNX12-205ENST00000490561 RASSF10A6NK89 507 aa15.31■□□□□ 0.04
SNX12-205ENST00000490561 ZBTB5O15062 677 aa15.31■□□□□ 0.04
SNX12-205ENST00000490561 CYTH3O43739 400 aa15.31■□□□□ 0.04
SNX12-205ENST00000490561 ZBED4O75132 1171 aa15.31■□□□□ 0.04
SNX12-205ENST00000490561 SCG2P13521 617 aa15.31■□□□□ 0.04
SNX12-205ENST00000490561 SLC4A3P48751 1232 aa15.31■□□□□ 0.04
SNX12-205ENST00000490561 IRX3P78415 501 aaPredicted RBP15.31■□□□□ 0.04
SNX12-205ENST00000490561 SREBF2Q12772 1141 aa15.31■□□□□ 0.04
SNX12-205ENST00000490561 PFKFB3Q16875 520 aaPredicted RBP15.31■□□□□ 0.04
SNX12-205ENST00000490561 CMTR1Q8N1G2 835 aaKnown RBP15.31■□□□□ 0.04
SNX12-205ENST00000490561 MB21D1Q8N884 522 aa15.31■□□□□ 0.04
SNX12-205ENST00000490561 KIFC2Q96AC6 838 aa15.31■□□□□ 0.04
SNX12-205ENST00000490561 DDX11Q96FC9 970 aa15.31■□□□□ 0.04
SNX12-205ENST00000490561 MS4A4AQ96JQ5 239 aa15.31■□□□□ 0.04
SNX12-205ENST00000490561 RANBP17Q9H2T7 1088 aaKnown RBP15.31■□□□□ 0.04
SNX12-205ENST00000490561 JMJD4Q9H9V9 463 aa15.31■□□□□ 0.04
SNX12-205ENST00000490561 PRR12Q9ULL5 1215 aa15.31■□□□□ 0.04
SNX12-205ENST00000490561 PTPRFP10586 1907 aa15.31■□□□□ 0.04
SNX12-205ENST00000490561 FDPSP14324 419 aaKnown RBP15.3■□□□□ 0.04
SNX12-205ENST00000490561 DSG3P32926 999 aa15.3■□□□□ 0.04
SNX12-205ENST00000490561 SLC16A2P36021 539 aa15.3■□□□□ 0.04
SNX12-205ENST00000490561 DGKZQ13574 1117 aa15.3■□□□□ 0.04
SNX12-205ENST00000490561 MOGSQ13724 837 aa15.3■□□□□ 0.04
SNX12-205ENST00000490561 TRIM29Q14134 588 aa15.3■□□□□ 0.04
SNX12-205ENST00000490561 CDC37Q16543 378 aaPredicted RBP15.3■□□□□ 0.04
SNX12-205ENST00000490561 DEFB115Q30KQ5 88 aa15.3■□□□□ 0.04
SNX12-205ENST00000490561 PPP1R18Q6NYC8 613 aa15.3■□□□□ 0.04
SNX12-205ENST00000490561 TEX2Q8IWB9 1127 aa15.3■□□□□ 0.04
SNX12-205ENST00000490561 SPRYD3Q8NCJ5 442 aa15.3■□□□□ 0.04
SNX12-205ENST00000490561 CCDC148Q8NFR7 591 aa15.3■□□□□ 0.04
SNX12-205ENST00000490561 PIGSQ96S52 555 aa15.3■□□□□ 0.04
SNX12-205ENST00000490561 ALG1Q9BT22 464 aa15.3■□□□□ 0.04
SNX12-205ENST00000490561 VAT1LQ9HCJ6 419 aa15.3■□□□□ 0.04
SNX12-205ENST00000490561 SH3GLB2Q9NR46 395 aa15.3■□□□□ 0.04
SNX12-205ENST00000490561 FOXD4L1Q9NU39 408 aa15.3■□□□□ 0.04
SNX12-205ENST00000490561 CIZ1Q9ULV3 898 aaPredicted RBP15.3■□□□□ 0.04
SNX12-205ENST00000490561 OAZ1P54368 228 aa15.29■□□□□ 0.04
SNX12-205ENST00000490561 NOGQ13253 232 aa15.29■□□□□ 0.04
SNX12-205ENST00000490561 TREML2Q5T2D2 321 aa15.29■□□□□ 0.04
SNX12-205ENST00000490561 LARP1BQ659C4 914 aaKnown RBP15.29■□□□□ 0.04
SNX12-205ENST00000490561 OTUD7BQ6GQQ9 843 aa15.29■□□□□ 0.04
SNX12-205ENST00000490561 GPAT2Q6NUI2 795 aa15.29■□□□□ 0.04
SNX12-205ENST00000490561 LBX2Q6XYB7 198 aa15.29■□□□□ 0.04
SNX12-205ENST00000490561 PAXIP1Q6ZW49 1069 aaPredicted RBP15.29■□□□□ 0.04
SNX12-205ENST00000490561 HOMER1Q86YM7 354 aa15.29■□□□□ 0.04
SNX12-205ENST00000490561 C8orf76Q96K31 380 aa15.29■□□□□ 0.04
SNX12-205ENST00000490561 AMNQ9BXJ7 453 aa15.29■□□□□ 0.04
SNX12-205ENST00000490561 FBXO28Q9NVF7 368 aa15.29■□□□□ 0.04
SNX12-205ENST00000490561 FAM155AB1AL88 458 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms