RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 PDLIM7Q9NR12 457 aa21.2■□□□□ 0.98
YIPF3-208ENST00000490447 PHF24Q9UPV7 400 aa21.2■□□□□ 0.98
YIPF3-208ENST00000490447 TTC41PQ6P2S7 1318 aa21.2■□□□□ 0.98
YIPF3-208ENST00000490447 PATL2C9JE40 543 aaKnown RBP21.19■□□□□ 0.98
YIPF3-208ENST00000490447 TTLL1O95922 423 aa21.19■□□□□ 0.98
YIPF3-208ENST00000490447 SLC3A2P08195 630 aaKnown RBP21.19■□□□□ 0.98
YIPF3-208ENST00000490447 CPXCR1Q8N123 301 aa21.19■□□□□ 0.98
YIPF3-208ENST00000490447 BADQ92934 168 aa21.19■□□□□ 0.98
YIPF3-208ENST00000490447 GREB1LQ9C091 1923 aaPredicted RBP21.19■□□□□ 0.98
YIPF3-208ENST00000490447 ZNF865P0CJ78 1059 aaPredicted RBP21.18■□□□□ 0.98
YIPF3-208ENST00000490447 TSPY3P0CV98 308 aa21.18■□□□□ 0.98
YIPF3-208ENST00000490447 TSPY8P0CW00 308 aa21.18■□□□□ 0.98
YIPF3-208ENST00000490447 TAL1P17542 331 aaPredicted RBP21.18■□□□□ 0.98
YIPF3-208ENST00000490447 PDE4BQ07343 736 aa21.18■□□□□ 0.98
YIPF3-208ENST00000490447 IFNL3Q8IZI9 196 aa21.18■□□□□ 0.98
YIPF3-208ENST00000490447 CEP95Q96GE4 821 aa21.18■□□□□ 0.98
YIPF3-208ENST00000490447 FSD1Q9BTV5 496 aa21.18■□□□□ 0.98
YIPF3-208ENST00000490447 MTMR4Q9NYA4 1195 aa21.18■□□□□ 0.98
YIPF3-208ENST00000490447 FEM1BQ9UK73 627 aa21.18■□□□□ 0.98
YIPF3-208ENST00000490447 ISY1Q9ULR0 285 aaKnown RBP21.18■□□□□ 0.98
YIPF3-208ENST00000490447 SYNPO2Q9UMS6 1093 aa21.18■□□□□ 0.98
YIPF3-208ENST00000490447 SYNGAP1Q96PV0 1343 aa21.18■□□□□ 0.98
YIPF3-208ENST00000490447 IGKV6D-41A0A0C4DH26 115 aa21.17■□□□□ 0.98
YIPF3-208ENST00000490447 ATP2A1O14983 1001 aa21.17■□□□□ 0.98
YIPF3-208ENST00000490447 ZNF697Q5TEC3 545 aa21.17■□□□□ 0.98
YIPF3-208ENST00000490447 FAM109BQ6ICB4 259 aaPredicted RBP21.17■□□□□ 0.98
YIPF3-208ENST00000490447 ANKRD35Q8N283 1001 aa21.17■□□□□ 0.98
YIPF3-208ENST00000490447 MKL1Q969V6 931 aa21.17■□□□□ 0.98
YIPF3-208ENST00000490447 NAPBQ9H115 298 aa21.17■□□□□ 0.98
YIPF3-208ENST00000490447 RAVER2Q9HCJ3 691 aaKnown RBP21.17■□□□□ 0.98
YIPF3-208ENST00000490447 ZHX1Q9UKY1 873 aaPredicted RBP21.17■□□□□ 0.98
YIPF3-208ENST00000490447 FAM184BQ9ULE4 1060 aa21.17■□□□□ 0.98
YIPF3-208ENST00000490447 RIPK3Q9Y572 518 aa21.17■□□□□ 0.98
YIPF3-208ENST00000490447 TACC3Q9Y6A5 838 aa21.17■□□□□ 0.98
YIPF3-208ENST00000490447 LTBP2Q14767 1821 aa21.16■□□□□ 0.98
YIPF3-208ENST00000490447 A0A1W2PQ45 241 aaPredicted RBP21.16■□□□□ 0.98
YIPF3-208ENST00000490447 A0A1W2PQY0 241 aa21.16■□□□□ 0.98
YIPF3-208ENST00000490447 POTEB2H3BUK9 544 aa21.16■□□□□ 0.98
YIPF3-208ENST00000490447 CLTBP09497 229 aa21.16■□□□□ 0.98
YIPF3-208ENST00000490447 TLE2Q04725 743 aa21.16■□□□□ 0.98
YIPF3-208ENST00000490447 LRRC47Q8N1G4 583 aaKnown RBP21.16■□□□□ 0.98
YIPF3-208ENST00000490447 LENG1Q96BZ8 264 aaPredicted RBP21.16■□□□□ 0.98
YIPF3-208ENST00000490447 FAM161BQ96MY7 647 aa21.16■□□□□ 0.98
YIPF3-208ENST00000490447 SLC38A10Q9HBR0 1119 aa21.16■□□□□ 0.98
YIPF3-208ENST00000490447 FBXO40Q9UH90 709 aa21.16■□□□□ 0.98
YIPF3-208ENST00000490447 ZNFX1Q9P2E3 1918 aaKnown RBP21.15■□□□□ 0.98
YIPF3-208ENST00000490447 TRIM43BA6NCK2 446 aa21.15■□□□□ 0.98
YIPF3-208ENST00000490447 PQBP1O60828 265 aaKnown RBP21.15■□□□□ 0.98
YIPF3-208ENST00000490447 SHHQ15465 462 aa21.15■□□□□ 0.98
YIPF3-208ENST00000490447 SH3RF1Q7Z6J0 888 aa21.15■□□□□ 0.98
YIPF3-208ENST00000490447 GMCL1P1Q8NEA9 526 aa21.15■□□□□ 0.98
YIPF3-208ENST00000490447 NUP133Q8WUM0 1156 aa21.15■□□□□ 0.98
YIPF3-208ENST00000490447 TRIM43Q96BQ3 446 aaPredicted RBP21.15■□□□□ 0.98
YIPF3-208ENST00000490447 SEC62Q99442 399 aaKnown RBP21.15■□□□□ 0.98
YIPF3-208ENST00000490447 ZBTB47Q9UFB7 747 aaPredicted RBP21.15■□□□□ 0.98
YIPF3-208ENST00000490447 PLXNA1Q9UIW2 1896 aa21.15■□□□□ 0.98
YIPF3-208ENST00000490447 ADAMTS4O75173 837 aa21.14■□□□□ 0.97
YIPF3-208ENST00000490447 BMP3P12645 472 aa21.14■□□□□ 0.97
YIPF3-208ENST00000490447 OAZ1P54368 228 aa21.14■□□□□ 0.97
YIPF3-208ENST00000490447 IKQ13123 557 aaPredicted RBP21.14■□□□□ 0.97
YIPF3-208ENST00000490447 SLFN13Q68D06 897 aa21.14■□□□□ 0.97
YIPF3-208ENST00000490447 MAMDC4Q6UXC1 1216 aa21.14■□□□□ 0.97
YIPF3-208ENST00000490447 ZNF467Q7Z7K2 595 aaPredicted RBP21.14■□□□□ 0.97
YIPF3-208ENST00000490447 CHST13Q8NET6 341 aa21.14■□□□□ 0.97
YIPF3-208ENST00000490447 PI4K2BQ8TCG2 481 aa21.14■□□□□ 0.97
YIPF3-208ENST00000490447 TSEN34Q9BSV6 310 aaKnown RBP21.14■□□□□ 0.97
YIPF3-208ENST00000490447 STARD7Q9NQZ5 370 aa21.14■□□□□ 0.97
YIPF3-208ENST00000490447 SYNRGQ9UMZ2 1314 aa21.14■□□□□ 0.97
YIPF3-208ENST00000490447 PLIN4Q96Q06 1357 aa21.14■□□□□ 0.97
YIPF3-208ENST00000490447 UNC80Q8N2C7 3258 aa21.14■□□□□ 0.97
YIPF3-208ENST00000490447 DNAJC25-GNG10A0A024R161 153 aa21.13■□□□□ 0.97
YIPF3-208ENST00000490447 MOXD2PA6NHM9 499 aa21.13■□□□□ 0.97
YIPF3-208ENST00000490447 FDX1P10109 184 aa21.13■□□□□ 0.97
YIPF3-208ENST00000490447 RAG1P15918 1043 aa21.13■□□□□ 0.97
YIPF3-208ENST00000490447 STAT2P52630 851 aa21.13■□□□□ 0.97
YIPF3-208ENST00000490447 PPARAQ07869 468 aa21.13■□□□□ 0.97
YIPF3-208ENST00000490447 PPP4R3BQ5MIZ7 849 aa21.13■□□□□ 0.97
YIPF3-208ENST00000490447 C9orf50Q5SZB4 431 aa21.13■□□□□ 0.97
YIPF3-208ENST00000490447 NEDD1Q8NHV4 660 aa21.13■□□□□ 0.97
YIPF3-208ENST00000490447 SPC25Q9HBM1 224 aa21.13■□□□□ 0.97
YIPF3-208ENST00000490447 SNAI1O95863 264 aaPredicted RBP21.12■□□□□ 0.97
YIPF3-208ENST00000490447 MX1P20591 662 aa21.12■□□□□ 0.97
YIPF3-208ENST00000490447 ACLYP53396 1101 aa21.12■□□□□ 0.97
YIPF3-208ENST00000490447 TFAP4Q01664 338 aa21.12■□□□□ 0.97
YIPF3-208ENST00000490447 ACVR2BQ13705 512 aa21.12■□□□□ 0.97
YIPF3-208ENST00000490447 ABHD16BQ9H3Z7 469 aa21.12■□□□□ 0.97
YIPF3-208ENST00000490447 HOMER2Q9NSB8 354 aa21.12■□□□□ 0.97
YIPF3-208ENST00000490447 TMEM39AQ9NV64 488 aa21.12■□□□□ 0.97
YIPF3-208ENST00000490447 DCDC2CA8MYV0 355 aa21.11■□□□□ 0.97
YIPF3-208ENST00000490447 TMEM232C9JQI7 657 aa21.11■□□□□ 0.97
YIPF3-208ENST00000490447 DUSP11O75319 330 aaKnown RBP21.11■□□□□ 0.97
YIPF3-208ENST00000490447 ZMYM1Q5SVZ6 1142 aa21.11■□□□□ 0.97
YIPF3-208ENST00000490447 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.11■□□□□ 0.97
YIPF3-208ENST00000490447 GUCD1Q96NT3 240 aa21.11■□□□□ 0.97
YIPF3-208ENST00000490447 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.11■□□□□ 0.97
YIPF3-208ENST00000490447 MYH4Q9Y623 1939 aa21.11■□□□□ 0.97
YIPF3-208ENST00000490447 TSPY2A6NKD2 308 aa21.1■□□□□ 0.97
YIPF3-208ENST00000490447 C6orf222P0C671 652 aaPredicted RBP21.1■□□□□ 0.97
YIPF3-208ENST00000490447 SLC1A4P43007 532 aa21.1■□□□□ 0.97
YIPF3-208ENST00000490447 SMAD3P84022 425 aaKnown RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms