RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 FAAP100Q0VG06 881 aa8.94□□□□□ -0.98
PDLIM1-203ENST00000490391 FAM47AQ5JRC9 791 aa8.94□□□□□ -0.98
PDLIM1-203ENST00000490391 CCDC129Q6ZRS4 1044 aa8.94□□□□□ -0.98
PDLIM1-203ENST00000490391 HERVK_113Q902F9 699 aa8.94□□□□□ -0.98
PDLIM1-203ENST00000490391 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.94□□□□□ -0.98
PDLIM1-203ENST00000490391 TBX21Q9UL17 535 aa8.94□□□□□ -0.98
PDLIM1-203ENST00000490391 ADAMTS8Q9UP79 889 aa8.94□□□□□ -0.98
PDLIM1-203ENST00000490391 YBX2Q9Y2T7 364 aaKnown RBP8.94□□□□□ -0.98
PDLIM1-203ENST00000490391 NDUFB9Q9Y6M9 179 aa8.94□□□□□ -0.98
PDLIM1-203ENST00000490391 SALL1Q9NSC2 1324 aa8.94□□□□□ -0.98
PDLIM1-203ENST00000490391 CHD8Q9HCK8 2581 aa8.93□□□□□ -0.98
PDLIM1-203ENST00000490391 F6X3S4 739 aa8.93□□□□□ -0.98
PDLIM1-203ENST00000490391 PQBP1O60828 265 aaKnown RBP8.93□□□□□ -0.98
PDLIM1-203ENST00000490391 JAG1P78504 1218 aa8.93□□□□□ -0.98
PDLIM1-203ENST00000490391 CALD1Q05682 793 aaKnown RBP8.93□□□□□ -0.98
PDLIM1-203ENST00000490391 PICALMQ13492 652 aa8.93□□□□□ -0.98
PDLIM1-203ENST00000490391 ANKRD33Q7Z3H0 272 aa8.93□□□□□ -0.98
PDLIM1-203ENST00000490391 CCAR1Q8IX12 1150 aaKnown RBP8.93□□□□□ -0.98
PDLIM1-203ENST00000490391 SLC44A5Q8NCS7 719 aa8.93□□□□□ -0.98
PDLIM1-203ENST00000490391 GTF3C2Q8WUA4 911 aaPredicted RBP8.93□□□□□ -0.98
PDLIM1-203ENST00000490391 TSR2Q969E8 191 aaKnown RBP8.93□□□□□ -0.98
PDLIM1-203ENST00000490391 SUCLG2Q96I99 432 aa8.93□□□□□ -0.98
PDLIM1-203ENST00000490391 FBXL18Q96ME1 805 aa8.93□□□□□ -0.98
PDLIM1-203ENST00000490391 NKX2-4Q9H2Z4 354 aa8.93□□□□□ -0.98
PDLIM1-203ENST00000490391 TMEM39AQ9NV64 488 aa8.93□□□□□ -0.98
PDLIM1-203ENST00000490391 RABGAP1Q9Y3P9 1069 aa8.93□□□□□ -0.98
PDLIM1-203ENST00000490391 TPRP12270 2363 aaKnown RBP8.93□□□□□ -0.98
PDLIM1-203ENST00000490391 GVINP1Q7Z2Y8 2422 aa8.93□□□□□ -0.98
PDLIM1-203ENST00000490391 ZFHX4Q86UP3 3567 aa8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 KMT2BQ9UMN6 2715 aaPredicted RBP8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 FAM186AA6NE01 2351 aa8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 H3BM21 787 aa8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 GLRX3O76003 335 aaKnown RBP8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 TIMP1P01033 207 aa8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 IFIT1P09914 478 aaKnown RBP8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 POU3F3P20264 500 aaPredicted RBP8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 ZEB1P37275 1124 aaPredicted RBP8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 RHBDL3P58872 404 aa8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 PUM3Q15397 648 aaKnown RBP8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 RAB30Q15771 203 aa8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 TWISTNBQ3B726 338 aaPredicted RBP8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 RABL6Q3YEC7 729 aaPredicted RBP8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 OLFML2BQ68BL8 750 aa8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 MFSD5Q6N075 450 aa8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 MICALL1Q8N3F8 863 aa8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 TOX2Q96NM4 488 aa8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 AS3MTQ9HBK9 375 aa8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 TMOD4Q9NZQ9 345 aa8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 CHD6Q8TD26 2715 aa8.92□□□□□ -0.98
PDLIM1-203ENST00000490391 ZNF292O60281 2723 aa8.91□□□□□ -0.98
PDLIM1-203ENST00000490391 NCOR2Q9Y618 2525 aa8.91□□□□□ -0.98
PDLIM1-203ENST00000490391 DNAH14Q0VDD8 3507 aa8.91□□□□□ -0.98
PDLIM1-203ENST00000490391 A0A1W2PQ45 241 aaPredicted RBP8.91□□□□□ -0.98
PDLIM1-203ENST00000490391 A0A1W2PQY0 241 aa8.91□□□□□ -0.98
PDLIM1-203ENST00000490391 BTDP43251 543 aa8.91□□□□□ -0.98
PDLIM1-203ENST00000490391 KCNMA1Q12791 1236 aa8.91□□□□□ -0.98
PDLIM1-203ENST00000490391 SHROOM1Q2M3G4 852 aaPredicted RBP8.91□□□□□ -0.98
PDLIM1-203ENST00000490391 ZNF365Q70YC5 407 aa8.91□□□□□ -0.98
PDLIM1-203ENST00000490391 ANKRD44Q8N8A2 993 aa8.91□□□□□ -0.98
PDLIM1-203ENST00000490391 KLHDC4Q8TBB5 520 aa8.91□□□□□ -0.98
PDLIM1-203ENST00000490391 KCNH6Q9H252 994 aa8.91□□□□□ -0.98
PDLIM1-203ENST00000490391 SLC28A3Q9HAS3 691 aa8.91□□□□□ -0.98
PDLIM1-203ENST00000490391 MSRAQ9UJ68 235 aa8.91□□□□□ -0.98
PDLIM1-203ENST00000490391 COG5Q9UP83 839 aa8.91□□□□□ -0.98
PDLIM1-203ENST00000490391 MTCH2Q9Y6C9 303 aa8.91□□□□□ -0.98
PDLIM1-203ENST00000490391 ZNF521Q96K83 1311 aa8.9□□□□□ -0.98
PDLIM1-203ENST00000490391 C19orf81C9J6K1 198 aa8.9□□□□□ -0.98
PDLIM1-203ENST00000490391 APAF1O14727 1248 aa8.9□□□□□ -0.98
PDLIM1-203ENST00000490391 CSF2RAP15509 400 aa8.9□□□□□ -0.98
PDLIM1-203ENST00000490391 CCNA1P78396 465 aa8.9□□□□□ -0.98
PDLIM1-203ENST00000490391 PPIGQ13427 754 aaKnown RBP eCLIP8.9□□□□□ -0.98
PDLIM1-203ENST00000490391 SKIV2LQ15477 1246 aaKnown RBP8.9□□□□□ -0.98
PDLIM1-203ENST00000490391 PRAMEF19Q5SWL8 479 aa8.9□□□□□ -0.98
PDLIM1-203ENST00000490391 PSRC1Q6PGN9 363 aaPredicted RBP8.9□□□□□ -0.98
PDLIM1-203ENST00000490391 KCTD17Q8N5Z5 321 aa8.9□□□□□ -0.98
PDLIM1-203ENST00000490391 ZNF384Q8TF68 577 aa8.9□□□□□ -0.98
PDLIM1-203ENST00000490391 BICC1Q9H694 974 aaKnown RBP8.9□□□□□ -0.98
PDLIM1-203ENST00000490391 DNAJC18Q9H819 358 aa8.9□□□□□ -0.98
PDLIM1-203ENST00000490391 CWC22Q9HCG8 908 aaKnown RBP8.9□□□□□ -0.98
PDLIM1-203ENST00000490391 PRDM9Q9NQV7 894 aa8.9□□□□□ -0.98
PDLIM1-203ENST00000490391 WDR70Q9NW82 654 aa8.9□□□□□ -0.98
PDLIM1-203ENST00000490391 BTBD7Q9P203 1132 aa8.9□□□□□ -0.98
PDLIM1-203ENST00000490391 DMXL1Q9Y485 3027 aa8.89□□□□□ -0.99
PDLIM1-203ENST00000490391 ROBO3Q96MS0 1386 aa8.89□□□□□ -0.99
PDLIM1-203ENST00000490391 A0A0G2JMZ2 1700 aa8.89□□□□□ -0.99
PDLIM1-203ENST00000490391 MROH7-TTC4A0A0A0MT08 1334 aa8.89□□□□□ -0.99
PDLIM1-203ENST00000490391 GPR75-ASB3A0A0A6YYF3 556 aa8.89□□□□□ -0.99
PDLIM1-203ENST00000490391 USP17L10C9JJH3 530 aa8.89□□□□□ -0.99
PDLIM1-203ENST00000490391 ASNSP08243 561 aa8.89□□□□□ -0.99
PDLIM1-203ENST00000490391 NBPF7P0C2Y1 421 aaPredicted RBP8.89□□□□□ -0.99
PDLIM1-203ENST00000490391 ACRP10323 421 aa8.89□□□□□ -0.99
PDLIM1-203ENST00000490391 FOXK2Q01167 660 aa8.89□□□□□ -0.99
PDLIM1-203ENST00000490391 RALBP1Q15311 655 aa8.89□□□□□ -0.99
PDLIM1-203ENST00000490391 WDR78Q5VTH9 848 aa8.89□□□□□ -0.99
PDLIM1-203ENST00000490391 LBX2Q6XYB7 198 aa8.89□□□□□ -0.99
PDLIM1-203ENST00000490391 LPIN2Q92539 896 aa8.89□□□□□ -0.99
PDLIM1-203ENST00000490391 C12orf42Q96LP6 360 aa8.89□□□□□ -0.99
PDLIM1-203ENST00000490391 PHOX2BQ99453 314 aa8.89□□□□□ -0.99
PDLIM1-203ENST00000490391 REPIN1Q9BWE0 567 aaKnown RBP8.89□□□□□ -0.99
PDLIM1-203ENST00000490391 C9orf78Q9NZ63 289 aaPredicted RBP8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms