RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 WDR19Q8NEZ3 1342 aa16.84■□□□□ 0.29
SRGAP3-208ENST00000490348 ERICH2A1L162 156 aa16.84■□□□□ 0.29
SRGAP3-208ENST00000490348 FMNL1O95466 1100 aaPredicted RBP16.84■□□□□ 0.29
SRGAP3-208ENST00000490348 FCGRTP55899 365 aa16.84■□□□□ 0.29
SRGAP3-208ENST00000490348 KIF22Q14807 665 aa16.84■□□□□ 0.29
SRGAP3-208ENST00000490348 FAM160B2Q86V87 743 aa16.84■□□□□ 0.29
SRGAP3-208ENST00000490348 CPVLQ9H3G5 476 aa16.84■□□□□ 0.29
SRGAP3-208ENST00000490348 PRR12Q9ULL5 1215 aa16.84■□□□□ 0.29
SRGAP3-208ENST00000490348 MKI67P46013 3256 aaKnown RBP16.84■□□□□ 0.29
SRGAP3-208ENST00000490348 LIFRP42702 1097 aa16.83■□□□□ 0.28
SRGAP3-208ENST00000490348 SNAP25P60880 206 aa16.83■□□□□ 0.28
SRGAP3-208ENST00000490348 STAG2Q8N3U4 1231 aa16.83■□□□□ 0.28
SRGAP3-208ENST00000490348 CHURC1Q8WUH1 139 aa16.83■□□□□ 0.28
SRGAP3-208ENST00000490348 MCOLN1Q9GZU1 580 aa16.83■□□□□ 0.28
SRGAP3-208ENST00000490348 MAD2L2Q9UI95 211 aa16.83■□□□□ 0.28
SRGAP3-208ENST00000490348 ZNF536O15090 1300 aa16.83■□□□□ 0.28
SRGAP3-208ENST00000490348 TNPO2O14787 897 aaKnown RBP16.82■□□□□ 0.28
SRGAP3-208ENST00000490348 HMGB1P09429 215 aaKnown RBP16.82■□□□□ 0.28
SRGAP3-208ENST00000490348 CASTP20810 708 aaKnown RBP16.82■□□□□ 0.28
SRGAP3-208ENST00000490348 PRKCZQ05513 592 aa16.82■□□□□ 0.28
SRGAP3-208ENST00000490348 IKQ13123 557 aaPredicted RBP16.82■□□□□ 0.28
SRGAP3-208ENST00000490348 PLS1Q14651 629 aa16.82■□□□□ 0.28
SRGAP3-208ENST00000490348 SLC35G1Q2M3R5 365 aa16.82■□□□□ 0.28
SRGAP3-208ENST00000490348 GPATCH4Q5T3I0 446 aaKnown RBP16.82■□□□□ 0.28
SRGAP3-208ENST00000490348 MYL10Q9BUA6 226 aa16.82■□□□□ 0.28
SRGAP3-208ENST00000490348 GABRQQ9UN88 632 aa16.82■□□□□ 0.28
SRGAP3-208ENST00000490348 RIPK3Q9Y572 518 aa16.82■□□□□ 0.28
SRGAP3-208ENST00000490348 ATP2A1O14983 1001 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 ERCC3P19447 782 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 RPS6KB1P23443 525 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 ASPRV1Q53RT3 343 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 SYDE2Q5VT97 1194 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 GPR142Q7Z601 462 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 SGMS1Q86VZ5 419 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 ZNF654Q8IZM8 581 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 UBA5Q9GZZ9 404 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 ZSWIM6Q9HCJ5 1215 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 SRRDQ9UH36 339 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 GJD2Q9UKL4 321 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 PTPN22Q9Y2R2 807 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 PLXNB2O15031 1838 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 PALM3A6NDB9 673 aaPredicted RBP16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 GNRH1P01148 92 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 PARP1P09874 1014 aaKnown RBP16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 TAL1P17542 331 aaPredicted RBP16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 MAPK4P31152 587 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 STAT3P40763 770 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 CCNA1P78396 465 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 GRM4Q14833 912 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 BLOC1S2Q6QNY1 142 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 CATIPQ7Z7H3 387 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 RIOX2Q8IUF8 465 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 IL17RAQ96F46 866 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 TEX13BQ9BXU2 312 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 RANBP17Q9H2T7 1088 aaKnown RBP16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 RAVER2Q9HCJ3 691 aaKnown RBP16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 BRPF3Q9ULD4 1205 aa16.81■□□□□ 0.28
SRGAP3-208ENST00000490348 ZBED4O75132 1171 aa16.8■□□□□ 0.28
SRGAP3-208ENST00000490348 SNRNP48Q6IEG0 339 aaKnown RBP16.8■□□□□ 0.28
SRGAP3-208ENST00000490348 RAB11FIP4Q86YS3 637 aa16.8■□□□□ 0.28
SRGAP3-208ENST00000490348 CPXCR1Q8N123 301 aa16.8■□□□□ 0.28
SRGAP3-208ENST00000490348 SHCBP1Q8NEM2 672 aa16.8■□□□□ 0.28
SRGAP3-208ENST00000490348 AGBL1Q96MI9 1066 aa16.8■□□□□ 0.28
SRGAP3-208ENST00000490348 UPF3BQ9BZI7 483 aaKnown RBP16.8■□□□□ 0.28
SRGAP3-208ENST00000490348 TM6SF1Q9BZW5 370 aa16.8■□□□□ 0.28
SRGAP3-208ENST00000490348 PTCH2Q9Y6C5 1203 aa16.8■□□□□ 0.28
SRGAP3-208ENST00000490348 DDAH1O94760 285 aa16.79■□□□□ 0.28
SRGAP3-208ENST00000490348 RXRAP19793 462 aa16.79■□□□□ 0.28
SRGAP3-208ENST00000490348 PSMA5P28066 241 aa16.79■□□□□ 0.28
SRGAP3-208ENST00000490348 FLT3LGP49771 235 aa16.79■□□□□ 0.28
SRGAP3-208ENST00000490348 OAZ1P54368 228 aa16.79■□□□□ 0.28
SRGAP3-208ENST00000490348 ARHGEF6Q15052 776 aa16.79■□□□□ 0.28
SRGAP3-208ENST00000490348 PKN2Q16513 984 aaKnown RBP16.79■□□□□ 0.28
SRGAP3-208ENST00000490348 MORN1Q5T089 497 aa16.79■□□□□ 0.28
SRGAP3-208ENST00000490348 CCDC174Q6PII3 467 aa16.79■□□□□ 0.28
SRGAP3-208ENST00000490348 FBXO46Q6PJ61 603 aaPredicted RBP16.79■□□□□ 0.28
SRGAP3-208ENST00000490348 NFXL1Q6ZNB6 911 aa16.79■□□□□ 0.28
SRGAP3-208ENST00000490348 Q6ZUG5 572 aa16.79■□□□□ 0.28
SRGAP3-208ENST00000490348 RUFY3Q7L099 469 aa16.79■□□□□ 0.28
SRGAP3-208ENST00000490348 PLEKHH3Q7Z736 793 aa16.79■□□□□ 0.28
SRGAP3-208ENST00000490348 NBPF11Q86T75 865 aa16.79■□□□□ 0.28
SRGAP3-208ENST00000490348 ADGRF4Q8IZF3 695 aa16.79■□□□□ 0.28
SRGAP3-208ENST00000490348 TMTC2Q8N394 836 aa16.79■□□□□ 0.28
SRGAP3-208ENST00000490348 USP6NLQ92738 828 aa16.79■□□□□ 0.28
SRGAP3-208ENST00000490348 COA7Q96BR5 231 aa16.79■□□□□ 0.28
SRGAP3-208ENST00000490348 AGXT2Q9BYV1 514 aa16.79■□□□□ 0.28
SRGAP3-208ENST00000490348 SMCHD1A6NHR9 2005 aa16.78■□□□□ 0.28
SRGAP3-208ENST00000490348 CCDC69A6NI79 296 aa16.78■□□□□ 0.28
SRGAP3-208ENST00000490348 KLRF2D3W0D1 207 aa16.78■□□□□ 0.28
SRGAP3-208ENST00000490348 FDX1P10109 184 aa16.78■□□□□ 0.28
SRGAP3-208ENST00000490348 ANAPC15P60006 121 aa16.78■□□□□ 0.28
SRGAP3-208ENST00000490348 WDR78Q5VTH9 848 aa16.78■□□□□ 0.28
SRGAP3-208ENST00000490348 APOA5Q6Q788 366 aa16.78■□□□□ 0.28
SRGAP3-208ENST00000490348 NCAPG2Q86XI2 1143 aa16.78■□□□□ 0.28
SRGAP3-208ENST00000490348 FBXL16Q8N461 479 aa16.78■□□□□ 0.28
SRGAP3-208ENST00000490348 NUP133Q8WUM0 1156 aa16.78■□□□□ 0.28
SRGAP3-208ENST00000490348 CYTH3O43739 400 aa16.77■□□□□ 0.28
SRGAP3-208ENST00000490348 SLC25A27O95847 323 aa16.77■□□□□ 0.28
SRGAP3-208ENST00000490348 PTPREP23469 700 aa16.77■□□□□ 0.28
SRGAP3-208ENST00000490348 HOXD10P28358 340 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms