RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 GMCL1Q96IK5 515 aa23.35■■□□□ 1.33
SMC4-222ENST00000490207 MMP19Q99542 508 aa23.35■■□□□ 1.33
SMC4-222ENST00000490207 HTATIP2Q9BUP3 242 aa23.35■■□□□ 1.33
SMC4-222ENST00000490207 TEX13BQ9BXU2 312 aa23.35■■□□□ 1.33
SMC4-222ENST00000490207 ALPK3Q96L96 1907 aa23.35■■□□□ 1.33
SMC4-222ENST00000490207 ZBED4O75132 1171 aa23.34■■□□□ 1.33
SMC4-222ENST00000490207 PCP11498 1178 aaKnown RBP23.34■■□□□ 1.33
SMC4-222ENST00000490207 SLC1A4P43007 532 aa23.34■■□□□ 1.33
SMC4-222ENST00000490207 SNRNP48Q6IEG0 339 aaKnown RBP23.34■■□□□ 1.33
SMC4-222ENST00000490207 MFSD6Q6ZSS7 791 aa23.34■■□□□ 1.33
SMC4-222ENST00000490207 RNF41Q9H4P4 317 aaPredicted RBP23.34■■□□□ 1.33
SMC4-222ENST00000490207 TMEM232C9JQI7 657 aa23.33■■□□□ 1.33
SMC4-222ENST00000490207 CYP2C19P33261 490 aa23.33■■□□□ 1.33
SMC4-222ENST00000490207 NOVP48745 357 aa23.33■■□□□ 1.33
SMC4-222ENST00000490207 STAT2P52630 851 aa23.33■■□□□ 1.33
SMC4-222ENST00000490207 KCTD2Q14681 263 aa23.33■■□□□ 1.33
SMC4-222ENST00000490207 DIS3LQ8TF46 1054 aaKnown RBP23.33■■□□□ 1.33
SMC4-222ENST00000490207 CHMP4CQ96CF2 233 aa23.33■■□□□ 1.33
SMC4-222ENST00000490207 DSCC1Q9BVC3 393 aa23.33■■□□□ 1.33
SMC4-222ENST00000490207 SLC38A10Q9HBR0 1119 aa23.33■■□□□ 1.33
SMC4-222ENST00000490207 OGDHLQ9ULD0 1010 aa23.33■■□□□ 1.33
SMC4-222ENST00000490207 NEDD4P46934 1319 aa23.33■■□□□ 1.32
SMC4-222ENST00000490207 ZNF213O14771 459 aa23.32■■□□□ 1.32
SMC4-222ENST00000490207 MCCP23508 829 aa23.32■■□□□ 1.32
SMC4-222ENST00000490207 IKQ13123 557 aaPredicted RBP23.32■■□□□ 1.32
SMC4-222ENST00000490207 RASGRP2Q7LDG7 609 aa23.32■■□□□ 1.32
SMC4-222ENST00000490207 FAM160B2Q86V87 743 aa23.32■■□□□ 1.32
SMC4-222ENST00000490207 CPXCR1Q8N123 301 aa23.32■■□□□ 1.32
SMC4-222ENST00000490207 DPF3Q92784 378 aa23.32■■□□□ 1.32
SMC4-222ENST00000490207 PAWRQ96IZ0 340 aaKnown RBP23.32■■□□□ 1.32
SMC4-222ENST00000490207 TCP11L1Q9NUJ3 509 aa23.32■■□□□ 1.32
SMC4-222ENST00000490207 RAD50Q92878 1312 aa23.32■■□□□ 1.32
SMC4-222ENST00000490207 ATP2A1O14983 1001 aa23.31■■□□□ 1.32
SMC4-222ENST00000490207 IGHA2P01877 340 aa23.31■■□□□ 1.32
SMC4-222ENST00000490207 KCTD1Q719H9 257 aa23.31■■□□□ 1.32
SMC4-222ENST00000490207 NECAB2Q7Z6G3 386 aa23.31■■□□□ 1.32
SMC4-222ENST00000490207 MAML3Q96JK9 1138 aa23.31■■□□□ 1.32
SMC4-222ENST00000490207 IL25Q9H293 177 aa23.31■■□□□ 1.32
SMC4-222ENST00000490207 RAVER2Q9HCJ3 691 aaKnown RBP23.31■■□□□ 1.32
SMC4-222ENST00000490207 MTMR7Q9Y216 660 aa23.31■■□□□ 1.32
SMC4-222ENST00000490207 PGK2P07205 417 aa23.3■■□□□ 1.32
SMC4-222ENST00000490207 FDX1P10109 184 aa23.3■■□□□ 1.32
SMC4-222ENST00000490207 CYBAP13498 195 aa23.3■■□□□ 1.32
SMC4-222ENST00000490207 SLC4A3P48751 1232 aa23.3■■□□□ 1.32
SMC4-222ENST00000490207 OAZ1P54368 228 aa23.3■■□□□ 1.32
SMC4-222ENST00000490207 CHURC1Q8WUH1 139 aa23.3■■□□□ 1.32
SMC4-222ENST00000490207 RIPK3Q9Y572 518 aa23.3■■□□□ 1.32
SMC4-222ENST00000490207 PLA2G6O60733 806 aa23.29■■□□□ 1.32
SMC4-222ENST00000490207 TOP1P11387 765 aaKnown RBP23.29■■□□□ 1.32
SMC4-222ENST00000490207 CNGA1P29973 690 aa23.29■■□□□ 1.32
SMC4-222ENST00000490207 MNX1P50219 401 aaPredicted RBP23.29■■□□□ 1.32
SMC4-222ENST00000490207 CCDC96Q2M329 555 aa23.29■■□□□ 1.32
SMC4-222ENST00000490207 LHX8Q68G74 356 aa23.29■■□□□ 1.32
SMC4-222ENST00000490207 RCSD1Q6JBY9 416 aa23.29■■□□□ 1.32
SMC4-222ENST00000490207 TRPV1Q8NER1 839 aa23.29■■□□□ 1.32
SMC4-222ENST00000490207 DCAF4Q8WV16 495 aa23.29■■□□□ 1.32
SMC4-222ENST00000490207 ESR2Q92731 530 aa23.29■■□□□ 1.32
SMC4-222ENST00000490207 TMEM47Q9BQJ4 181 aa23.29■■□□□ 1.32
SMC4-222ENST00000490207 DDX20Q9UHI6 824 aaKnown RBP23.29■■□□□ 1.32
SMC4-222ENST00000490207 MSCO60682 206 aa23.28■■□□□ 1.32
SMC4-222ENST00000490207 IMMTQ16891 758 aaKnown RBP23.28■■□□□ 1.32
SMC4-222ENST00000490207 CTNNA3Q9UI47 895 aa23.28■■□□□ 1.32
SMC4-222ENST00000490207 NT5C2P49902 561 aa23.27■■□□□ 1.32
SMC4-222ENST00000490207 ZNF792Q3KQV3 632 aa23.27■■□□□ 1.32
SMC4-222ENST00000490207 RUFY2Q8WXA3 655 aa23.27■■□□□ 1.32
SMC4-222ENST00000490207 C11orf49Q9H6J7 331 aa23.27■■□□□ 1.32
SMC4-222ENST00000490207 DIS3Q9Y2L1 958 aaKnown RBP23.27■■□□□ 1.32
SMC4-222ENST00000490207 H0YGN5 161 aa23.26■■□□□ 1.31
SMC4-222ENST00000490207 CHMLP26374 656 aa23.26■■□□□ 1.31
SMC4-222ENST00000490207 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.26■■□□□ 1.31
SMC4-222ENST00000490207 CHST13Q8NET6 341 aa23.26■■□□□ 1.31
SMC4-222ENST00000490207 FBXO40Q9UH90 709 aa23.26■■□□□ 1.31
SMC4-222ENST00000490207 DDX11Q96FC9 970 aa23.25■■□□□ 1.31
SMC4-222ENST00000490207 TTC14Q96N46 770 aa23.25■■□□□ 1.31
SMC4-222ENST00000490207 ZKSCAN3Q9BRR0 538 aa23.25■■□□□ 1.31
SMC4-222ENST00000490207 TINF2Q9BSI4 451 aa23.25■■□□□ 1.31
SMC4-222ENST00000490207 PRR12Q9ULL5 1215 aa23.25■■□□□ 1.31
SMC4-222ENST00000490207 B4E1Z4 1266 aa23.24■■□□□ 1.31
SMC4-222ENST00000490207 KDM4AO75164 1064 aa23.24■■□□□ 1.31
SMC4-222ENST00000490207 CCDC174Q6PII3 467 aa23.24■■□□□ 1.31
SMC4-222ENST00000490207 HOMER2Q9NSB8 354 aa23.24■■□□□ 1.31
SMC4-222ENST00000490207 NR2E3Q9Y5X4 410 aa23.24■■□□□ 1.31
SMC4-222ENST00000490207 ZNF536O15090 1300 aa23.24■■□□□ 1.31
SMC4-222ENST00000490207 FRMPD2Q68DX3 1309 aaPredicted RBP23.24■■□□□ 1.31
SMC4-222ENST00000490207 SEPT4O43236 478 aa23.23■■□□□ 1.31
SMC4-222ENST00000490207 EVI5O60447 810 aa23.23■■□□□ 1.31
SMC4-222ENST00000490207 PDHBP11177 359 aa23.23■■□□□ 1.31
SMC4-222ENST00000490207 PRAMEF19Q5SWL8 479 aa23.23■■□□□ 1.31
SMC4-222ENST00000490207 IQCA1Q86XH1 822 aa23.23■■□□□ 1.31
SMC4-222ENST00000490207 ANKRD35Q8N283 1001 aa23.23■■□□□ 1.31
SMC4-222ENST00000490207 ACAD9Q9H845 621 aa23.23■■□□□ 1.31
SMC4-222ENST00000490207 RNF146Q9NTX7 359 aa23.23■■□□□ 1.31
SMC4-222ENST00000490207 PFASO15067 1338 aa23.23■■□□□ 1.31
SMC4-222ENST00000490207 MCM3APO60318 1980 aa23.22■■□□□ 1.31
SMC4-222ENST00000490207 DNAJC25-GNG10A0A024R161 153 aa23.22■■□□□ 1.31
SMC4-222ENST00000490207 SNAP25P60880 206 aa23.22■■□□□ 1.31
SMC4-222ENST00000490207 CCDC178Q5BJE1 867 aa23.22■■□□□ 1.31
SMC4-222ENST00000490207 SYDE2Q5VT97 1194 aa23.22■■□□□ 1.31
SMC4-222ENST00000490207 TTBK2Q6IQ55 1244 aa23.22■■□□□ 1.31
SMC4-222ENST00000490207 BTNL9Q6UXG8 535 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms