RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 KATNA1O75449 491 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 MTNR1BP49286 362 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 SIK1P57059 783 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 FOXO1Q12778 655 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 MORC1Q86VD1 984 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 AMIGO3Q86WK7 504 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 TRIM22Q8IYM9 498 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 WDR66Q8TBY9 1149 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 STAC3Q96MF2 364 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 ESF1Q9H501 851 aaKnown RBP3.83□□□□□ -1.8
UBXN4-208ENST00000490163 AGO4Q9HCK5 861 aaKnown RBP3.83□□□□□ -1.8
UBXN4-208ENST00000490163 SAGE1Q9NXZ1 904 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 TRHDEQ9UKU6 1024 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 PNMA2Q9UL42 364 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 PHTF1Q9UMS5 762 aa3.83□□□□□ -1.8
UBXN4-208ENST00000490163 MAFO75444 373 aaPredicted RBP3.82□□□□□ -1.8
UBXN4-208ENST00000490163 ZBTB48P10074 688 aaPredicted RBP3.82□□□□□ -1.8
UBXN4-208ENST00000490163 ALFQ53S48 1182 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 SLC10A5Q5PT55 438 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 CDCA2Q69YH5 1023 aaPredicted RBP3.82□□□□□ -1.8
UBXN4-208ENST00000490163 TTLL5Q6EMB2 1281 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 ZCCHC8Q6NZY4 707 aaKnown RBP3.82□□□□□ -1.8
UBXN4-208ENST00000490163 KCNK18Q7Z418 384 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 SLC41A1Q8IVJ1 513 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 DLG3Q92796 817 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 RASSF4Q9H2L5 321 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 CYP26B1Q9NR63 512 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 USP25Q9UHP3 1055 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 DNM3Q9UQ16 869 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 LAMC3Q9Y6N6 1575 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 ULK1O75385 1050 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 ITGAVP06756 1048 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 RHCEP18577 417 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 RECQLP46063 649 aaPredicted RBP3.82□□□□□ -1.8
UBXN4-208ENST00000490163 PPP2R2AP63151 447 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 RHDQ02161 417 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 DENND5AQ6IQ26 1287 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 FAM214BQ7L5A3 538 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 FGD2Q7Z6J4 655 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 TJP2Q9UDY2 1190 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 KRBA1A5PL33 1030 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 SOX1O00570 391 aaPredicted RBP3.82□□□□□ -1.8
UBXN4-208ENST00000490163 TIMM44O43615 452 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 PGRP06401 933 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 RPL17P18621 184 aaKnown RBP3.82□□□□□ -1.8
UBXN4-208ENST00000490163 GGCXP38435 758 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 SEMA5AQ13591 1074 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 LRRC32Q14392 662 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 NRN1LQ496H8 165 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 GPAT2Q6NUI2 795 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 GPR52Q9Y2T5 361 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 FHOD1Q9Y613 1164 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 DGKBQ9Y6T7 804 aa3.82□□□□□ -1.8
UBXN4-208ENST00000490163 THOC2Q8NI27 1593 aaKnown RBP3.81□□□□□ -1.8
UBXN4-208ENST00000490163 HSD3B1P14060 373 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 ZKSCAN1P17029 563 aaPredicted RBP3.81□□□□□ -1.8
UBXN4-208ENST00000490163 L1CAMP32004 1257 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 CASP2P42575 452 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 CDK8P49336 464 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 KRT83P78385 493 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 POU4F2Q12837 409 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 ZBTB37Q5TC79 503 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 BRI3BPQ8WY22 251 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 FAXDC2Q96IV6 333 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 WDR12Q9GZL7 423 aaKnown RBP3.81□□□□□ -1.8
UBXN4-208ENST00000490163 PPARGC1AQ9UBK2 798 aaKnown RBP3.81□□□□□ -1.8
UBXN4-208ENST00000490163 ST14Q9Y5Y6 855 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 A0A0G2JS52 829 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 IRS4O14654 1257 aaPredicted RBP3.81□□□□□ -1.8
UBXN4-208ENST00000490163 BNIP3LO60238 219 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 LTFP02788 710 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 GRK6P43250 576 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 FXR1P51114 621 aaKnown RBP eCLIP3.81□□□□□ -1.8
UBXN4-208ENST00000490163 ADKP55263 362 aaKnown RBP3.81□□□□□ -1.8
UBXN4-208ENST00000490163 SLBPQ14493 270 aaKnown RBP eCLIP3.81□□□□□ -1.8
UBXN4-208ENST00000490163 PPP2R5EQ16537 467 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 ZNF697Q5TEC3 545 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 IFNL2Q8IZJ0 200 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 BVESQ8NE79 360 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 PSMG3-AS1Q96PY0 264 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 FERD3LQ96RJ6 166 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 CRBNQ96SW2 442 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 BTBD1Q9H0C5 482 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 DIS3Q9Y2L1 958 aaKnown RBP3.81□□□□□ -1.8
UBXN4-208ENST00000490163 R3HCC1Q9Y3T6 440 aaKnown RBP3.81□□□□□ -1.8
UBXN4-208ENST00000490163 KIF21AQ7Z4S6 1674 aa3.81□□□□□ -1.8
UBXN4-208ENST00000490163 DDX3YO15523 660 aaKnown RBP3.8□□□□□ -1.8
UBXN4-208ENST00000490163 ZSCAN20P17040 1043 aaPredicted RBP3.8□□□□□ -1.8
UBXN4-208ENST00000490163 SESN3P58005 492 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 SMAD3P84022 425 aaKnown RBP3.8□□□□□ -1.8
UBXN4-208ENST00000490163 SMAD2Q15796 467 aaKnown RBP3.8□□□□□ -1.8
UBXN4-208ENST00000490163 GRAMD1BQ3KR37 738 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 ZNF468Q5VIY5 522 aaPredicted RBP3.8□□□□□ -1.8
UBXN4-208ENST00000490163 YOD1Q5VVQ6 348 aaPredicted RBP3.8□□□□□ -1.8
UBXN4-208ENST00000490163 DEPTORQ8TB45 409 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 SLC35G2Q8TBE7 412 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 PI4K2BQ8TCG2 481 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 SGCZQ96LD1 299 aa3.8□□□□□ -1.8
UBXN4-208ENST00000490163 FAM193BQ96PV7 902 aaPredicted RBP3.8□□□□□ -1.8
UBXN4-208ENST00000490163 LPIN3Q9BQK8 851 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms