RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 SLF1Q9BQI6 1058 aa17.74■□□□□ 0.43
BRD9-208ENST00000489816 PCDHA6Q9UN73 950 aa17.74■□□□□ 0.43
BRD9-208ENST00000489816 PCDHA8Q9Y5H6 950 aa17.74■□□□□ 0.43
BRD9-208ENST00000489816 CCP110O43303 1012 aa17.74■□□□□ 0.43
BRD9-208ENST00000489816 CCNT1O60563 726 aaKnown RBP17.74■□□□□ 0.43
BRD9-208ENST00000489816 CCDC175P0C221 793 aa17.74■□□□□ 0.43
BRD9-208ENST00000489816 ATP2B2Q01814 1243 aa17.74■□□□□ 0.43
BRD9-208ENST00000489816 RPGRQ92834 1020 aaKnown RBP17.74■□□□□ 0.43
BRD9-208ENST00000489816 CHP1Q99653 195 aa17.74■□□□□ 0.43
BRD9-208ENST00000489816 MXD3Q9BW11 206 aa17.74■□□□□ 0.43
BRD9-208ENST00000489816 TRIM10Q9UDY6 481 aa17.74■□□□□ 0.43
BRD9-208ENST00000489816 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.73■□□□□ 0.43
BRD9-208ENST00000489816 DMTNQ08495 405 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 CDKAL1Q5VV42 579 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 TEX11Q8IYF3 940 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 GJA10Q969M2 543 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 EYA3Q99504 573 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 TMEM260Q9NX78 707 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 PHLPP2Q6ZVD8 1323 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 NKRFO15226 690 aaKnown RBP eCLIP17.73■□□□□ 0.43
BRD9-208ENST00000489816 POLR3GO15318 223 aaPredicted RBP17.73■□□□□ 0.43
BRD9-208ENST00000489816 BAG3O95817 575 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 RASA1P20936 1047 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 TECP42680 631 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 KCNJ6P48051 423 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 PPP2R3AQ06190 1150 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 NAALADL2Q58DX5 795 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 SPTY2D1Q68D10 685 aaPredicted RBP17.73■□□□□ 0.43
BRD9-208ENST00000489816 AMOTL1Q8IY63 956 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 C4orf32Q8N8J7 132 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 ADGRG1Q9Y653 693 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 KCNJ18B7U540 433 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 BMP15O95972 392 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 TXLNAP40222 546 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 KCNJ12Q14500 433 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 CCDC178Q5BJE1 867 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 MFSD14BQ5SR56 506 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 ELOA2Q8IYF1 753 aaPredicted RBP17.73■□□□□ 0.43
BRD9-208ENST00000489816 LRRC47Q8N1G4 583 aaKnown RBP17.73■□□□□ 0.43
BRD9-208ENST00000489816 LRRC4BQ9NT99 713 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 RNF216Q9NWF9 866 aaPredicted RBP17.73■□□□□ 0.43
BRD9-208ENST00000489816 MKRN1Q9UHC7 482 aaKnown RBP17.73■□□□□ 0.43
BRD9-208ENST00000489816 USP21Q9UK80 565 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 CNTNAP4Q9C0A0 1308 aa17.73■□□□□ 0.43
BRD9-208ENST00000489816 KRT9P35527 623 aa17.72■□□□□ 0.43
BRD9-208ENST00000489816 SBK1Q52WX2 424 aa17.72■□□□□ 0.43
BRD9-208ENST00000489816 KRT222Q8N1A0 295 aa17.72■□□□□ 0.43
BRD9-208ENST00000489816 WDR66Q8TBY9 1149 aa17.72■□□□□ 0.43
BRD9-208ENST00000489816 TADA3O75528 432 aa17.72■□□□□ 0.43
BRD9-208ENST00000489816 CALML3P27482 149 aa17.72■□□□□ 0.43
BRD9-208ENST00000489816 CDK8P49336 464 aa17.72■□□□□ 0.43
BRD9-208ENST00000489816 COPB1P53618 953 aaKnown RBP17.72■□□□□ 0.43
BRD9-208ENST00000489816 CEP95Q96GE4 821 aa17.72■□□□□ 0.43
BRD9-208ENST00000489816 PIGSQ96S52 555 aa17.72■□□□□ 0.43
BRD9-208ENST00000489816 SRRTQ9BXP5 876 aaKnown RBP17.72■□□□□ 0.43
BRD9-208ENST00000489816 PLCH1Q4KWH8 1693 aa17.71■□□□□ 0.43
BRD9-208ENST00000489816 ERICH4A6NGS2 130 aa17.71■□□□□ 0.43
BRD9-208ENST00000489816 GTPBP6O43824 516 aaPredicted RBP17.71■□□□□ 0.43
BRD9-208ENST00000489816 MFAP3LO75121 409 aa17.71■□□□□ 0.43
BRD9-208ENST00000489816 PCP11498 1178 aaKnown RBP17.71■□□□□ 0.43
BRD9-208ENST00000489816 ERVK-24P63145 666 aa17.71■□□□□ 0.43
BRD9-208ENST00000489816 DGKHQ86XP1 1220 aa17.71■□□□□ 0.43
BRD9-208ENST00000489816 CD209Q9NNX6 404 aa17.71■□□□□ 0.43
BRD9-208ENST00000489816 DISC1Q9NRI5 854 aa17.71■□□□□ 0.43
BRD9-208ENST00000489816 MORC2Q9Y6X9 1032 aaPredicted RBP17.71■□□□□ 0.43
BRD9-208ENST00000489816 SMCO2A6NFE2 343 aa17.71■□□□□ 0.43
BRD9-208ENST00000489816 UBAP1LF5GYI3 381 aa17.71■□□□□ 0.43
BRD9-208ENST00000489816 GRAPQ13588 217 aa17.71■□□□□ 0.43
BRD9-208ENST00000489816 TXNRD1Q16881 649 aa17.71■□□□□ 0.43
BRD9-208ENST00000489816 GRAPLQ8TC17 118 aaPredicted RBP17.71■□□□□ 0.43
BRD9-208ENST00000489816 COA7Q96BR5 231 aa17.71■□□□□ 0.43
BRD9-208ENST00000489816 TRIM47Q96LD4 638 aa17.71■□□□□ 0.43
BRD9-208ENST00000489816 ZCCHC17Q9NP64 241 aaKnown RBP17.71■□□□□ 0.43
BRD9-208ENST00000489816 H2AFXP16104 143 aaPredicted RBP17.71■□□□□ 0.42
BRD9-208ENST00000489816 TXKP42681 527 aa17.71■□□□□ 0.42
BRD9-208ENST00000489816 KLK7P49862 253 aa17.71■□□□□ 0.42
BRD9-208ENST00000489816 KIF4BQ2VIQ3 1234 aa17.71■□□□□ 0.42
BRD9-208ENST00000489816 TCP11X2Q5H9J9 407 aa17.71■□□□□ 0.42
BRD9-208ENST00000489816 USP17L5A8MUK1 530 aa17.7■□□□□ 0.42
BRD9-208ENST00000489816 GTF2IP78347 998 aa17.7■□□□□ 0.42
BRD9-208ENST00000489816 PRR5LQ6MZQ0 368 aa17.7■□□□□ 0.42
BRD9-208ENST00000489816 ZNF804AQ7Z570 1209 aa17.7■□□□□ 0.42
BRD9-208ENST00000489816 GPCPD1Q9NPB8 672 aa17.7■□□□□ 0.42
BRD9-208ENST00000489816 STXBP3O00186 592 aa17.7■□□□□ 0.42
BRD9-208ENST00000489816 FCER1AP12319 257 aa17.7■□□□□ 0.42
BRD9-208ENST00000489816 KIFC2Q96AC6 838 aa17.7■□□□□ 0.42
BRD9-208ENST00000489816 HINFPQ9BQA5 517 aa17.7■□□□□ 0.42
BRD9-208ENST00000489816 MYO1BO43795 1136 aa17.69■□□□□ 0.42
BRD9-208ENST00000489816 PLCG1P19174 1290 aa17.69■□□□□ 0.42
BRD9-208ENST00000489816 GRM4Q14833 912 aa17.69■□□□□ 0.42
BRD9-208ENST00000489816 ZNF658Q5TYW1 1059 aaPredicted RBP17.69■□□□□ 0.42
BRD9-208ENST00000489816 TMCO3Q6UWJ1 677 aa17.69■□□□□ 0.42
BRD9-208ENST00000489816 SLC35F6Q8N357 371 aa17.69■□□□□ 0.42
BRD9-208ENST00000489816 PCMTD1Q96MG8 357 aaPredicted RBP17.69■□□□□ 0.42
BRD9-208ENST00000489816 PARP1P09874 1014 aaKnown RBP17.69■□□□□ 0.42
BRD9-208ENST00000489816 MAP3K9P80192 1104 aa17.69■□□□□ 0.42
BRD9-208ENST00000489816 IRF2BP1Q8IU81 584 aa17.69■□□□□ 0.42
BRD9-208ENST00000489816 GUCA1BQ9UMX6 200 aa17.69■□□□□ 0.42
BRD9-208ENST00000489816 ENC1O14682 589 aa17.69■□□□□ 0.42
BRD9-208ENST00000489816 SCNN1DP51172 638 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms